RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 ADGRL2O95490 1459 aa24.3■■□□□ 1.48
CD4-212ENST00000544344 MYO5BQ9ULV0 1848 aa24.3■■□□□ 1.48
CD4-212ENST00000544344 CHD2O14647 1828 aaKnown RBP24.29■■□□□ 1.48
CD4-212ENST00000544344 MSH6P52701 1360 aa24.28■■□□□ 1.48
CD4-212ENST00000544344 PHLPP1O60346 1717 aa24.27■■□□□ 1.48
CD4-212ENST00000544344 RPRD2Q5VT52 1461 aaKnown RBP24.27■■□□□ 1.48
CD4-212ENST00000544344 SLAIN2Q9P270 581 aa24.26■■□□□ 1.47
CD4-212ENST00000544344 PLEKHG1Q9ULL1 1385 aa24.26■■□□□ 1.47
CD4-212ENST00000544344 TMEM131LA2VDJ0 1609 aa24.24■■□□□ 1.47
CD4-212ENST00000544344 GCC2Q8IWJ2 1684 aa24.24■■□□□ 1.47
CD4-212ENST00000544344 APLP2Q06481 763 aa24.24■■□□□ 1.47
CD4-212ENST00000544344 COL16A1Q07092 1604 aaPredicted RBP24.23■■□□□ 1.47
CD4-212ENST00000544344 SETD1AO15047 1707 aaKnown RBP24.23■■□□□ 1.47
CD4-212ENST00000544344 RIMS2Q9UQ26 1411 aa24.22■■□□□ 1.47
CD4-212ENST00000544344 JCADQ9P266 1359 aa24.22■■□□□ 1.47
CD4-212ENST00000544344 BCANQ96GW7 911 aa24.22■■□□□ 1.47
CD4-212ENST00000544344 ANKRD50Q9ULJ7 1429 aa24.21■■□□□ 1.47
CD4-212ENST00000544344 TBX22Q9Y458 520 aa24.17■■□□□ 1.46
CD4-212ENST00000544344 NCOA3Q9Y6Q9 1424 aa24.17■■□□□ 1.46
CD4-212ENST00000544344 LRP6O75581 1613 aa24.16■■□□□ 1.46
CD4-212ENST00000544344 ADAMTS13Q76LX8 1427 aa24.16■■□□□ 1.46
CD4-212ENST00000544344 UNC13BO14795 1591 aa24.14■■□□□ 1.45
CD4-212ENST00000544344 PPP1R15AO75807 674 aaPredicted RBP24.14■■□□□ 1.45
CD4-212ENST00000544344 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.13■■□□□ 1.45
CD4-212ENST00000544344 E9PCH4 1651 aa24.12■■□□□ 1.45
CD4-212ENST00000544344 HDGFP51858 240 aaKnown RBP24.12■■□□□ 1.45
CD4-212ENST00000544344 AHDC1Q5TGY3 1603 aaPredicted RBP24.11■■□□□ 1.45
CD4-212ENST00000544344 FAM50AQ14320 339 aaKnown RBP24.11■■□□□ 1.45
CD4-212ENST00000544344 DIP2AQ14689 1571 aa24.1■■□□□ 1.45
CD4-212ENST00000544344 SPATA31A6Q5VVP1 1343 aa24.09■■□□□ 1.45
CD4-212ENST00000544344 SHPRHQ149N8 1683 aa24.08■■□□□ 1.45
CD4-212ENST00000544344 PIK3R4Q99570 1358 aa24.08■■□□□ 1.45
CD4-212ENST00000544344 NUTM2DQ5VT03 806 aaPredicted RBP24.08■■□□□ 1.45
CD4-212ENST00000544344 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.08■■□□□ 1.45
CD4-212ENST00000544344 C19orf44Q9H6X5 657 aa24.06■■□□□ 1.44
CD4-212ENST00000544344 PTPRUQ92729 1446 aa24.05■■□□□ 1.44
CD4-212ENST00000544344 CHGAP10645 457 aaKnown RBP24.05■■□□□ 1.44
CD4-212ENST00000544344 CADPS2Q86UW7 1296 aa24.05■■□□□ 1.44
CD4-212ENST00000544344 IQGAP3Q86VI3 1631 aa24.04■■□□□ 1.44
CD4-212ENST00000544344 C14orf37Q86TY3 774 aa24.04■■□□□ 1.44
CD4-212ENST00000544344 TRPM2O94759 1503 aa24.02■■□□□ 1.44
CD4-212ENST00000544344 ATF3P18847 181 aa24.01■■□□□ 1.43
CD4-212ENST00000544344 ZNF772Q68DY9 489 aaPredicted RBP24.01■■□□□ 1.43
CD4-212ENST00000544344 BRINP3Q76B58 766 aa24■■□□□ 1.43
CD4-212ENST00000544344 UPF1Q92900 1129 aaKnown RBP eCLIP24■■□□□ 1.43
CD4-212ENST00000544344 NRXN3Q9Y4C0 1643 aa23.99■■□□□ 1.43
CD4-212ENST00000544344 MEX3CQ5U5Q3 659 aaKnown RBP23.99■■□□□ 1.43
CD4-212ENST00000544344 AMOTL2Q9Y2J4 779 aa23.99■■□□□ 1.43
CD4-212ENST00000544344 ROCK1Q13464 1354 aa23.98■■□□□ 1.43
CD4-212ENST00000544344 XRN1Q8IZH2 1706 aaKnown RBP23.98■■□□□ 1.43
CD4-212ENST00000544344 TRIM52Q96A61 297 aa23.97■■□□□ 1.43
CD4-212ENST00000544344 DCCP43146 1447 aa23.96■■□□□ 1.43
CD4-212ENST00000544344 ASXL1Q8IXJ9 1541 aa23.94■■□□□ 1.42
CD4-212ENST00000544344 SETBP1Q9Y6X0 1596 aa23.94■■□□□ 1.42
CD4-212ENST00000544344 MST1RQ04912 1400 aa23.93■■□□□ 1.42
CD4-212ENST00000544344 SETD5Q9C0A6 1442 aa23.93■■□□□ 1.42
CD4-212ENST00000544344 NUP155O75694 1391 aa23.92■■□□□ 1.42
CD4-212ENST00000544344 NHSL1Q5SYE7 1610 aa23.92■■□□□ 1.42
CD4-212ENST00000544344 CDK12Q9NYV4 1490 aaPredicted RBP23.91■■□□□ 1.42
CD4-212ENST00000544344 NUTM2BA6NNL0 878 aaPredicted RBP23.9■■□□□ 1.42
CD4-212ENST00000544344 NUTM2EB1AL46 878 aaPredicted RBP23.9■■□□□ 1.42
CD4-212ENST00000544344 RXRBP28702 533 aa23.9■■□□□ 1.42
CD4-212ENST00000544344 NUTM2AQ8IVF1 878 aaPredicted RBP23.9■■□□□ 1.42
CD4-212ENST00000544344 METP08581 1390 aa23.89■■□□□ 1.41
CD4-212ENST00000544344 SPHKAPQ2M3C7 1700 aa23.87■■□□□ 1.41
CD4-212ENST00000544344 AFF2P51816 1311 aa23.86■■□□□ 1.41
CD4-212ENST00000544344 NALCNQ8IZF0 1738 aa23.83■■□□□ 1.41
CD4-212ENST00000544344 ADGRL3Q9HAR2 1447 aa23.83■■□□□ 1.4
CD4-212ENST00000544344 DDX17Q92841 729 aaKnown RBP23.82■■□□□ 1.4
CD4-212ENST00000544344 PNPLA6Q8IY17 1366 aa23.81■■□□□ 1.4
CD4-212ENST00000544344 LRRC59Q96AG4 307 aaKnown RBP23.81■■□□□ 1.4
CD4-212ENST00000544344 NEXMIFQ5QGS0 1516 aa23.8■■□□□ 1.4
CD4-212ENST00000544344 RGS12O14924 1447 aa23.79■■□□□ 1.4
CD4-212ENST00000544344 CLTCL1P53675 1640 aa23.78■■□□□ 1.4
CD4-212ENST00000544344 ZNF326Q5BKZ1 582 aaKnown RBP23.78■■□□□ 1.4
CD4-212ENST00000544344 ITGAEP38570 1179 aa23.77■■□□□ 1.4
CD4-212ENST00000544344 LAMC1P11047 1609 aa23.77■■□□□ 1.4
CD4-212ENST00000544344 C8orf37Q96NL8 207 aa23.76■■□□□ 1.39
CD4-212ENST00000544344 QTRT2Q9H974 415 aaKnown RBP23.75■■□□□ 1.39
CD4-212ENST00000544344 RBM6P78332 1123 aaKnown RBP23.74■■□□□ 1.39
CD4-212ENST00000544344 C1orf167Q5SNV9 1468 aa23.74■■□□□ 1.39
CD4-212ENST00000544344 PTCH1Q13635 1447 aa23.69■■□□□ 1.38
CD4-212ENST00000544344 KIF1BO60333 1816 aa23.69■■□□□ 1.38
CD4-212ENST00000544344 ROBO2Q9HCK4 1378 aa23.68■■□□□ 1.38
CD4-212ENST00000544344 SOS2Q07890 1332 aaPredicted RBP23.68■■□□□ 1.38
CD4-212ENST00000544344 ADAMTS2O95450 1211 aa23.67■■□□□ 1.38
CD4-212ENST00000544344 ORAI2Q96SN7 254 aa23.67■■□□□ 1.38
CD4-212ENST00000544344 PRAG1Q86YV5 1406 aa23.67■■□□□ 1.38
CD4-212ENST00000544344 SRCAPQ6ZRS2 3230 aa23.67■■□□□ 1.38
CD4-212ENST00000544344 NGLY1Q96IV0 654 aa23.66■■□□□ 1.38
CD4-212ENST00000544344 COL22A1Q8NFW1 1626 aaPredicted RBP23.62■■□□□ 1.37
CD4-212ENST00000544344 PPARGC1BQ86YN6 1023 aaKnown RBP23.62■■□□□ 1.37
CD4-212ENST00000544344 FNBP4Q8N3X1 1017 aaPredicted RBP23.6■■□□□ 1.37
CD4-212ENST00000544344 USP21Q9UK80 565 aa23.6■■□□□ 1.37
CD4-212ENST00000544344 NAIPQ13075 1403 aa23.59■■□□□ 1.37
CD4-212ENST00000544344 VGFO15240 615 aaPredicted RBP23.59■■□□□ 1.37
CD4-212ENST00000544344 ATAD2Q6PL18 1390 aa23.58■■□□□ 1.37
CD4-212ENST00000544344 ATRNO75882 1429 aa23.58■■□□□ 1.36
CD4-212ENST00000544344 TRPC5Q9UL62 973 aaPredicted RBP23.57■■□□□ 1.36
CD4-212ENST00000544344 PPLO60437 1756 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms