RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 MSH6P52701 1360 aa14.95□□□□□ -0.02
C2CD3-220ENST00000544293 NKTRP30414 1462 aaKnown RBP14.95□□□□□ -0.02
C2CD3-220ENST00000544293 ANKRD30AQ9BXX3 1397 aa14.94□□□□□ -0.02
C2CD3-220ENST00000544293 PLEKHG1Q9ULL1 1385 aa14.94□□□□□ -0.02
C2CD3-220ENST00000544293 NWD1Q149M9 1564 aa14.94□□□□□ -0.02
C2CD3-220ENST00000544293 LRP6O75581 1613 aa14.93□□□□□ -0.02
C2CD3-220ENST00000544293 FGD6Q6ZV73 1430 aa14.92□□□□□ -0.02
C2CD3-220ENST00000544293 BCANQ96GW7 911 aa14.92□□□□□ -0.02
C2CD3-220ENST00000544293 NUTM2DQ5VT03 806 aaPredicted RBP14.91□□□□□ -0.02
C2CD3-220ENST00000544293 ADAMTS13Q76LX8 1427 aa14.91□□□□□ -0.02
C2CD3-220ENST00000544293 RIMS2Q9UQ26 1411 aa14.91□□□□□ -0.02
C2CD3-220ENST00000544293 PTPN23Q9H3S7 1636 aa14.9□□□□□ -0.02
C2CD3-220ENST00000544293 ADGRB3O60242 1522 aa14.9□□□□□ -0.02
C2CD3-220ENST00000544293 NCOA3Q9Y6Q9 1424 aa14.9□□□□□ -0.02
C2CD3-220ENST00000544293 C19orf44Q9H6X5 657 aa14.89□□□□□ -0.03
C2CD3-220ENST00000544293 KDM5AP29375 1690 aaKnown RBP14.89□□□□□ -0.03
C2CD3-220ENST00000544293 SPATA31A6Q5VVP1 1343 aa14.89□□□□□ -0.03
C2CD3-220ENST00000544293 BRINP3Q76B58 766 aa14.87□□□□□ -0.03
C2CD3-220ENST00000544293 TRIM52Q96A61 297 aa14.87□□□□□ -0.03
C2CD3-220ENST00000544293 ADGRL2O95490 1459 aa14.87□□□□□ -0.03
C2CD3-220ENST00000544293 PTPRUQ92729 1446 aa14.86□□□□□ -0.03
C2CD3-220ENST00000544293 COL16A1Q07092 1604 aaPredicted RBP14.86□□□□□ -0.03
C2CD3-220ENST00000544293 ZNF772Q68DY9 489 aaPredicted RBP14.86□□□□□ -0.03
C2CD3-220ENST00000544293 ANKRD50Q9ULJ7 1429 aa14.85□□□□□ -0.03
C2CD3-220ENST00000544293 RPRD2Q5VT52 1461 aaKnown RBP14.85□□□□□ -0.03
C2CD3-220ENST00000544293 PPP1R15AO75807 674 aaPredicted RBP14.85□□□□□ -0.03
C2CD3-220ENST00000544293 HDGFP51858 240 aaKnown RBP14.85□□□□□ -0.03
C2CD3-220ENST00000544293 CADPS2Q86UW7 1296 aa14.85□□□□□ -0.03
C2CD3-220ENST00000544293 AMOTL2Q9Y2J4 779 aa14.85□□□□□ -0.03
C2CD3-220ENST00000544293 CROCC2H7BZ55 1655 aa14.84□□□□□ -0.03
C2CD3-220ENST00000544293 SETD1AO15047 1707 aaKnown RBP14.84□□□□□ -0.03
C2CD3-220ENST00000544293 RXRBP28702 533 aa14.83□□□□□ -0.04
C2CD3-220ENST00000544293 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.83□□□□□ -0.04
C2CD3-220ENST00000544293 CHGAP10645 457 aaKnown RBP14.82□□□□□ -0.04
C2CD3-220ENST00000544293 ATF3P18847 181 aa14.82□□□□□ -0.04
C2CD3-220ENST00000544293 PHLPP1O60346 1717 aa14.82□□□□□ -0.04
C2CD3-220ENST00000544293 PIK3R4Q99570 1358 aa14.82□□□□□ -0.04
C2CD3-220ENST00000544293 TMEM131LA2VDJ0 1609 aa14.81□□□□□ -0.04
C2CD3-220ENST00000544293 APLP2Q06481 763 aa14.81□□□□□ -0.04
C2CD3-220ENST00000544293 MEX3CQ5U5Q3 659 aaKnown RBP14.81□□□□□ -0.04
C2CD3-220ENST00000544293 C14orf37Q86TY3 774 aa14.81□□□□□ -0.04
C2CD3-220ENST00000544293 NUTM2BA6NNL0 878 aaPredicted RBP14.8□□□□□ -0.04
C2CD3-220ENST00000544293 NUTM2EB1AL46 878 aaPredicted RBP14.8□□□□□ -0.04
C2CD3-220ENST00000544293 FAM50AQ14320 339 aaKnown RBP14.8□□□□□ -0.04
C2CD3-220ENST00000544293 NUTM2AQ8IVF1 878 aaPredicted RBP14.8□□□□□ -0.04
C2CD3-220ENST00000544293 AHDC1Q5TGY3 1603 aaPredicted RBP14.8□□□□□ -0.04
C2CD3-220ENST00000544293 CHD2O14647 1828 aaKnown RBP14.8□□□□□ -0.04
C2CD3-220ENST00000544293 DDX17Q92841 729 aaKnown RBP14.79□□□□□ -0.04
C2CD3-220ENST00000544293 DIP2AQ14689 1571 aa14.78□□□□□ -0.04
C2CD3-220ENST00000544293 AFF2P51816 1311 aa14.78□□□□□ -0.04
C2CD3-220ENST00000544293 SETD5Q9C0A6 1442 aa14.77□□□□□ -0.04
C2CD3-220ENST00000544293 MST1RQ04912 1400 aa14.75□□□□□ -0.05
C2CD3-220ENST00000544293 METP08581 1390 aa14.75□□□□□ -0.05
C2CD3-220ENST00000544293 CDK12Q9NYV4 1490 aaPredicted RBP14.75□□□□□ -0.05
C2CD3-220ENST00000544293 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.75□□□□□ -0.05
C2CD3-220ENST00000544293 QTRT2Q9H974 415 aaKnown RBP14.74□□□□□ -0.05
C2CD3-220ENST00000544293 LRRC59Q96AG4 307 aaKnown RBP14.73□□□□□ -0.05
C2CD3-220ENST00000544293 DCCP43146 1447 aa14.72□□□□□ -0.05
C2CD3-220ENST00000544293 PNPLA6Q8IY17 1366 aa14.72□□□□□ -0.05
C2CD3-220ENST00000544293 RBM6P78332 1123 aaKnown RBP14.71□□□□□ -0.05
C2CD3-220ENST00000544293 C8orf37Q96NL8 207 aa14.71□□□□□ -0.05
C2CD3-220ENST00000544293 RGS12O14924 1447 aa14.71□□□□□ -0.05
C2CD3-220ENST00000544293 SRCAPQ6ZRS2 3230 aa14.71□□□□□ -0.06
C2CD3-220ENST00000544293 NUP155O75694 1391 aa14.71□□□□□ -0.06
C2CD3-220ENST00000544293 ASXL1Q8IXJ9 1541 aa14.71□□□□□ -0.06
C2CD3-220ENST00000544293 MYO5BQ9ULV0 1848 aa14.7□□□□□ -0.06
C2CD3-220ENST00000544293 SHPRHQ149N8 1683 aa14.7□□□□□ -0.06
C2CD3-220ENST00000544293 GCC2Q8IWJ2 1684 aa14.7□□□□□ -0.06
C2CD3-220ENST00000544293 ROCK1Q13464 1354 aa14.7□□□□□ -0.06
C2CD3-220ENST00000544293 UNC13BO14795 1591 aa14.68□□□□□ -0.06
C2CD3-220ENST00000544293 TRPM2O94759 1503 aa14.67□□□□□ -0.06
C2CD3-220ENST00000544293 ADAMTS2O95450 1211 aa14.67□□□□□ -0.06
C2CD3-220ENST00000544293 ORAI2Q96SN7 254 aa14.67□□□□□ -0.06
C2CD3-220ENST00000544293 E9PCH4 1651 aa14.67□□□□□ -0.06
C2CD3-220ENST00000544293 NRXN3Q9Y4C0 1643 aa14.66□□□□□ -0.06
C2CD3-220ENST00000544293 SOS2Q07890 1332 aaPredicted RBP14.66□□□□□ -0.06
C2CD3-220ENST00000544293 FNBP4Q8N3X1 1017 aaPredicted RBP14.65□□□□□ -0.06
C2CD3-220ENST00000544293 NGLY1Q96IV0 654 aa14.65□□□□□ -0.06
C2CD3-220ENST00000544293 ADGRL3Q9HAR2 1447 aa14.65□□□□□ -0.06
C2CD3-220ENST00000544293 SETBP1Q9Y6X0 1596 aa14.64□□□□□ -0.07
C2CD3-220ENST00000544293 C1orf167Q5SNV9 1468 aa14.64□□□□□ -0.07
C2CD3-220ENST00000544293 XRN1Q8IZH2 1706 aaKnown RBP14.63□□□□□ -0.07
C2CD3-220ENST00000544293 MSH5O43196 834 aa14.63□□□□□ -0.07
C2CD3-220ENST00000544293 ZNF326Q5BKZ1 582 aaKnown RBP14.63□□□□□ -0.07
C2CD3-220ENST00000544293 ROBO2Q9HCK4 1378 aa14.62□□□□□ -0.07
C2CD3-220ENST00000544293 ITGAEP38570 1179 aa14.61□□□□□ -0.07
C2CD3-220ENST00000544293 USP21Q9UK80 565 aa14.61□□□□□ -0.07
C2CD3-220ENST00000544293 IQGAP3Q86VI3 1631 aa14.61□□□□□ -0.07
C2CD3-220ENST00000544293 NHSL1Q5SYE7 1610 aa14.6□□□□□ -0.07
C2CD3-220ENST00000544293 TRPC5Q9UL62 973 aaPredicted RBP14.59□□□□□ -0.07
C2CD3-220ENST00000544293 ATRNO75882 1429 aa14.57□□□□□ -0.08
C2CD3-220ENST00000544293 BCL9LQ86UU0 1499 aa14.57□□□□□ -0.08
C2CD3-220ENST00000544293 NEXMIFQ5QGS0 1516 aa14.56□□□□□ -0.08
C2CD3-220ENST00000544293 ATAD2Q6PL18 1390 aa14.55□□□□□ -0.08
C2CD3-220ENST00000544293 PPARGC1BQ86YN6 1023 aaKnown RBP14.54□□□□□ -0.08
C2CD3-220ENST00000544293 PTCH1Q13635 1447 aa14.54□□□□□ -0.08
C2CD3-220ENST00000544293 MYOM2P54296 1465 aa14.53□□□□□ -0.08
C2CD3-220ENST00000544293 PRAG1Q86YV5 1406 aa14.53□□□□□ -0.08
C2CD3-220ENST00000544293 LAMC1P11047 1609 aa14.52□□□□□ -0.08
C2CD3-220ENST00000544293 VGFO15240 615 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms