RNA–Protein interactions for RNA: ENST00000544057.1

PHOX2A-202, Transcript of paired like homeobox 2A, humanhuman

TSL 3

Gene PHOX2A, Length 605 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2A-202ENST00000544057 ZFYVE9O95405 1425 aa43.39■■■■■ 4.54
PHOX2A-202ENST00000544057 KIF1BO60333 1816 aa43.39■■■■■ 4.54
PHOX2A-202ENST00000544057 PPP1R15AO75807 674 aaPredicted RBP43.37■■■■■ 4.53
PHOX2A-202ENST00000544057 ZNF326Q5BKZ1 582 aaKnown RBP43.34■■■■■ 4.53
PHOX2A-202ENST00000544057 CCDC144AA2RUR9 1427 aa43.33■■■■■ 4.53
PHOX2A-202ENST00000544057 ZNF335Q9H4Z2 1342 aaPredicted RBP43.32■■■■■ 4.53
PHOX2A-202ENST00000544057 CERKQ8TCT0 537 aa43.31■■■■■ 4.52
PHOX2A-202ENST00000544057 LTBP4Q8N2S1 1624 aa43.28■■■■■ 4.52
PHOX2A-202ENST00000544057 PLEKHG1Q9ULL1 1385 aa43.28■■■■■ 4.52
PHOX2A-202ENST00000544057 BCANQ96GW7 911 aa43.27■■■■■ 4.52
PHOX2A-202ENST00000544057 RPGRIP1LQ68CZ1 1315 aa43.22■■■■■ 4.51
PHOX2A-202ENST00000544057 NUTM2DQ5VT03 806 aaPredicted RBP43.18■■■■■ 4.5
PHOX2A-202ENST00000544057 CPS1P31327 1500 aa43.17■■■■■ 4.5
PHOX2A-202ENST00000544057 SLC26A8Q96RN1 970 aa43.15■■■■■ 4.5
PHOX2A-202ENST00000544057 ANKRD30BQ9BXX2 1392 aa43.14■■■■■ 4.5
PHOX2A-202ENST00000544057 IQSEC2Q5JU85 1478 aa43.13■■■■■ 4.49
PHOX2A-202ENST00000544057 NEXMIFQ5QGS0 1516 aa43.12■■■■■ 4.49
PHOX2A-202ENST00000544057 VGFO15240 615 aaPredicted RBP43.12■■■■■ 4.49
PHOX2A-202ENST00000544057 TBX22Q9Y458 520 aa43.12■■■■■ 4.49
PHOX2A-202ENST00000544057 SPATA31E1Q6ZUB1 1445 aa43.07■■■■■ 4.49
PHOX2A-202ENST00000544057 DIP2AQ14689 1571 aa43.05■■■■■ 4.48
PHOX2A-202ENST00000544057 KCNA6P17658 529 aa43.04■■■■■ 4.48
PHOX2A-202ENST00000544057 FBXO41Q8TF61 875 aa43.04■■■■■ 4.48
PHOX2A-202ENST00000544057 RGL3Q3MIN7 710 aa43.03■■■■■ 4.48
PHOX2A-202ENST00000544057 SENP3Q9H4L4 574 aaPredicted RBP43.03■■■■■ 4.48
PHOX2A-202ENST00000544057 ADAMTS13Q76LX8 1427 aa43.01■■■■■ 4.48
PHOX2A-202ENST00000544057 SETBP1Q9Y6X0 1596 aa43■■■■■ 4.47
PHOX2A-202ENST00000544057 PPLO60437 1756 aa43■■■■■ 4.47
PHOX2A-202ENST00000544057 STRCP1A6NGW2 1772 aa42.99■■■■■ 4.47
PHOX2A-202ENST00000544057 PIK3R4Q99570 1358 aa42.99■■■■■ 4.47
PHOX2A-202ENST00000544057 CHD2O14647 1828 aaKnown RBP42.92■■■■■ 4.46
PHOX2A-202ENST00000544057 NRXN3Q9Y4C0 1643 aa42.9■■■■■ 4.46
PHOX2A-202ENST00000544057 LRRC7Q96NW7 1537 aa42.9■■■■■ 4.46
PHOX2A-202ENST00000544057 NWD1Q149M9 1564 aa42.89■■■■■ 4.46
PHOX2A-202ENST00000544057 NKTRP30414 1462 aaKnown RBP42.87■■■■■ 4.45
PHOX2A-202ENST00000544057 IFT172Q9UG01 1749 aa42.86■■■■■ 4.45
PHOX2A-202ENST00000544057 ILDR1Q86SU0 546 aaPredicted RBP42.85■■■■■ 4.45
PHOX2A-202ENST00000544057 PROSER2Q86WR7 435 aaPredicted RBP42.83■■■■■ 4.45
PHOX2A-202ENST00000544057 ADGRF5Q8IZF2 1346 aa42.8■■■■■ 4.44
PHOX2A-202ENST00000544057 STAC3Q96MF2 364 aa42.8■■■■■ 4.44
PHOX2A-202ENST00000544057 AMOTL2Q9Y2J4 779 aa42.78■■■■■ 4.44
PHOX2A-202ENST00000544057 UBAP1LF5GYI3 381 aa42.76■■■■■ 4.44
PHOX2A-202ENST00000544057 ALKQ9UM73 1620 aa42.75■■■■■ 4.43
PHOX2A-202ENST00000544057 TOM1O60784 492 aa42.75■■■■■ 4.43
PHOX2A-202ENST00000544057 METP08581 1390 aa42.75■■■■■ 4.43
PHOX2A-202ENST00000544057 DHX57Q6P158 1386 aaKnown RBP42.75■■■■■ 4.43
PHOX2A-202ENST00000544057 MYOM2P54296 1465 aa42.74■■■■■ 4.43
PHOX2A-202ENST00000544057 TMEM94Q12767 1356 aa42.74■■■■■ 4.43
PHOX2A-202ENST00000544057 PTPRUQ92729 1446 aa42.71■■■■■ 4.43
PHOX2A-202ENST00000544057 PIK3C2GO75747 1445 aa42.7■■■■■ 4.43
PHOX2A-202ENST00000544057 NCOA3Q9Y6Q9 1424 aa42.69■■■■■ 4.42
PHOX2A-202ENST00000544057 XIRP1Q702N8 1843 aaKnown RBP42.68■■■■■ 4.42
PHOX2A-202ENST00000544057 SETD1AO15047 1707 aaKnown RBP42.68■■■■■ 4.42
PHOX2A-202ENST00000544057 DCAF11Q8TEB1 546 aa42.67■■■■■ 4.42
PHOX2A-202ENST00000544057 PCGF6Q9BYE7 350 aa42.67■■■■■ 4.42
PHOX2A-202ENST00000544057 NRXN1Q9ULB1 1477 aa42.67■■■■■ 4.42
PHOX2A-202ENST00000544057 XRN1Q8IZH2 1706 aaKnown RBP42.64■■■■■ 4.42
PHOX2A-202ENST00000544057 C14orf93Q9H972 538 aaKnown RBP42.61■■■■■ 4.41
PHOX2A-202ENST00000544057 KDM2AQ9Y2K7 1162 aa42.6■■■■■ 4.41
PHOX2A-202ENST00000544057 MSH6P52701 1360 aa42.59■■■■■ 4.41
PHOX2A-202ENST00000544057 RBM33Q96EV2 1170 aaKnown RBP42.58■■■■■ 4.41
PHOX2A-202ENST00000544057 C14orf37Q86TY3 774 aa42.56■■■■■ 4.4
PHOX2A-202ENST00000544057 LAMC1P11047 1609 aa42.55■■■■■ 4.4
PHOX2A-202ENST00000544057 PRAG1Q86YV5 1406 aa42.53■■■■■ 4.4
PHOX2A-202ENST00000544057 SIN3AQ96ST3 1273 aa42.52■■■■■ 4.4
PHOX2A-202ENST00000544057 PTCH1Q13635 1447 aa42.52■■■■■ 4.4
PHOX2A-202ENST00000544057 C19orf44Q9H6X5 657 aa42.51■■■■■ 4.4
PHOX2A-202ENST00000544057 CFAP70Q5T0N1 1121 aa42.5■■■■■ 4.39
PHOX2A-202ENST00000544057 NEUROD1Q13562 356 aa42.49■■■■■ 4.39
PHOX2A-202ENST00000544057 PIP4K2BP78356 416 aa42.48■■■■■ 4.39
PHOX2A-202ENST00000544057 SCAF1Q9H7N4 1312 aaKnown RBP42.47■■■■■ 4.39
PHOX2A-202ENST00000544057 LRPPRCP42704 1394 aaKnown RBP42.47■■■■■ 4.39
PHOX2A-202ENST00000544057 TMEM132EQ6IEE7 984 aa42.46■■■■■ 4.39
PHOX2A-202ENST00000544057 ABCC11Q96J66 1382 aa42.44■■■■■ 4.38
PHOX2A-202ENST00000544057 CADPS2Q86UW7 1296 aa42.42■■■■■ 4.38
PHOX2A-202ENST00000544057 ROBO2Q9HCK4 1378 aa42.41■■■■■ 4.38
PHOX2A-202ENST00000544057 TECPR2O15040 1411 aa42.41■■■■■ 4.38
PHOX2A-202ENST00000544057 YTHDC2Q9H6S0 1430 aaKnown RBP42.41■■■■■ 4.38
PHOX2A-202ENST00000544057 ATF3P18847 181 aa42.41■■■■■ 4.38
PHOX2A-202ENST00000544057 STK26Q9P289 416 aa42.41■■■■■ 4.38
PHOX2A-202ENST00000544057 ASXL1Q8IXJ9 1541 aa42.4■■■■■ 4.38
PHOX2A-202ENST00000544057 L3MBTL2Q969R5 705 aa42.39■■■■■ 4.38
PHOX2A-202ENST00000544057 SIRT1Q96EB6 747 aa42.37■■■■■ 4.37
PHOX2A-202ENST00000544057 SIPA1L2Q9P2F8 1722 aaPredicted RBP42.37■■■■■ 4.37
PHOX2A-202ENST00000544057 DCCP43146 1447 aa42.37■■■■■ 4.37
PHOX2A-202ENST00000544057 KNDC1Q76NI1 1749 aa42.36■■■■■ 4.37
PHOX2A-202ENST00000544057 ADGRL3Q9HAR2 1447 aa42.35■■■■■ 4.37
PHOX2A-202ENST00000544057 SLAIN2Q9P270 581 aa42.34■■■■■ 4.37
PHOX2A-202ENST00000544057 FAM135BQ49AJ0 1406 aa42.31■■■■■ 4.36
PHOX2A-202ENST00000544057 ADGRB1O14514 1584 aa42.28■■■■■ 4.36
PHOX2A-202ENST00000544057 KIAA1210Q9ULL0 1709 aa42.28■■■■■ 4.36
PHOX2A-202ENST00000544057 TONSLQ96HA7 1378 aa42.25■■■■■ 4.35
PHOX2A-202ENST00000544057 CLSPNQ9HAW4 1339 aa42.24■■■■■ 4.35
PHOX2A-202ENST00000544057 NALCNQ8IZF0 1738 aa42.23■■■■■ 4.35
PHOX2A-202ENST00000544057 WAPLQ7Z5K2 1190 aa42.23■■■■■ 4.35
PHOX2A-202ENST00000544057 DLC1Q96QB1 1528 aa42.22■■■■■ 4.35
PHOX2A-202ENST00000544057 HSPA1LP34931 641 aa42.18■■■■■ 4.34
PHOX2A-202ENST00000544057 TRAK1Q9UPV9 953 aa42.17■■■■■ 4.34
PHOX2A-202ENST00000544057 POGKQ9P215 609 aa42.16■■■■■ 4.34
PHOX2A-202ENST00000544057 ROBO1Q9Y6N7 1651 aa42.15■■■■■ 4.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms