RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 MRE11P49959 708 aa17.08■□□□□ 0.33
RPS6KC1-206ENST00000543354 NECTIN2Q92692 538 aa17.08■□□□□ 0.32
RPS6KC1-206ENST00000543354 LTV1Q96GA3 475 aaPredicted RBP17.08■□□□□ 0.32
RPS6KC1-206ENST00000543354 MINK1Q8N4C8 1332 aaPredicted RBP17.08■□□□□ 0.32
RPS6KC1-206ENST00000543354 MTHFSP49914 203 aa17.08■□□□□ 0.32
RPS6KC1-206ENST00000543354 RBM10P98175 930 aaKnown RBP17.07■□□□□ 0.32
RPS6KC1-206ENST00000543354 GGNBP2Q9H3C7 697 aa17.07■□□□□ 0.32
RPS6KC1-206ENST00000543354 TSR2Q969E8 191 aaKnown RBP17.06■□□□□ 0.32
RPS6KC1-206ENST00000543354 RUNDC1Q96C34 613 aa17.06■□□□□ 0.32
RPS6KC1-206ENST00000543354 TMEM132EQ6IEE7 984 aa17.06■□□□□ 0.32
RPS6KC1-206ENST00000543354 HMOX1P09601 288 aa17.06■□□□□ 0.32
RPS6KC1-206ENST00000543354 NASPP49321 788 aaPredicted RBP17.06■□□□□ 0.32
RPS6KC1-206ENST00000543354 RSPH4AQ5TD94 716 aa17.05■□□□□ 0.32
RPS6KC1-206ENST00000543354 C1orf115Q9H7X2 142 aa17.05■□□□□ 0.32
RPS6KC1-206ENST00000543354 WASHC2CQ9Y4E1 1318 aa17.05■□□□□ 0.32
RPS6KC1-206ENST00000543354 ANKRD50Q9ULJ7 1429 aa17.05■□□□□ 0.32
RPS6KC1-206ENST00000543354 CAVIN1Q6NZI2 390 aaKnown RBP17.05■□□□□ 0.32
RPS6KC1-206ENST00000543354 CCDC9Q9Y3X0 531 aaKnown RBP17.04■□□□□ 0.32
RPS6KC1-206ENST00000543354 PDS5BQ9NTI5 1447 aa17.04■□□□□ 0.32
RPS6KC1-206ENST00000543354 ANO2Q9NQ90 1003 aa17.04■□□□□ 0.32
RPS6KC1-206ENST00000543354 CFAP70Q5T0N1 1121 aa17.03■□□□□ 0.32
RPS6KC1-206ENST00000543354 FANCD2Q9BXW9 1451 aa17.02■□□□□ 0.32
RPS6KC1-206ENST00000543354 EXOSC9Q06265 439 aaKnown RBP17.02■□□□□ 0.31
RPS6KC1-206ENST00000543354 ZNF330Q9Y3S2 320 aaPredicted RBP17.02■□□□□ 0.31
RPS6KC1-206ENST00000543354 HFM1A2PYH4 1435 aa17.02■□□□□ 0.31
RPS6KC1-206ENST00000543354 ZNF592Q92610 1267 aa17.01■□□□□ 0.31
RPS6KC1-206ENST00000543354 HMGXB3Q12766 1538 aa17.01■□□□□ 0.31
RPS6KC1-206ENST00000543354 CASKIN1Q8WXD9 1431 aa17.01■□□□□ 0.31
RPS6KC1-206ENST00000543354 ERICH3Q5RHP9 1530 aa17■□□□□ 0.31
RPS6KC1-206ENST00000543354 HSP90B1P14625 803 aaKnown RBP17■□□□□ 0.31
RPS6KC1-206ENST00000543354 GNL2Q13823 731 aaKnown RBP17■□□□□ 0.31
RPS6KC1-206ENST00000543354 KIF16BQ96L93 1317 aa16.99■□□□□ 0.31
RPS6KC1-206ENST00000543354 DIAPH1O60610 1272 aaKnown RBP16.99■□□□□ 0.31
RPS6KC1-206ENST00000543354 SLC12A5Q9H2X9 1139 aa16.99■□□□□ 0.31
RPS6KC1-206ENST00000543354 NAIPQ13075 1403 aa16.99■□□□□ 0.31
RPS6KC1-206ENST00000543354 MCM4P33991 863 aa16.99■□□□□ 0.31
RPS6KC1-206ENST00000543354 PHF14O94880 888 aa16.99■□□□□ 0.31
RPS6KC1-206ENST00000543354 TIAM1Q13009 1591 aa16.99■□□□□ 0.31
RPS6KC1-206ENST00000543354 REC8O95072 547 aa16.97■□□□□ 0.31
RPS6KC1-206ENST00000543354 PRPF40AO75400 957 aaKnown RBP16.97■□□□□ 0.31
RPS6KC1-206ENST00000543354 PDE3AQ14432 1141 aa16.97■□□□□ 0.31
RPS6KC1-206ENST00000543354 CABP2Q9NPB3 220 aa16.96■□□□□ 0.31
RPS6KC1-206ENST00000543354 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.96■□□□□ 0.3
RPS6KC1-206ENST00000543354 EVC2Q86UK5 1308 aa16.95■□□□□ 0.3
RPS6KC1-206ENST00000543354 VPS37CA5D8V6 355 aaPredicted RBP16.95■□□□□ 0.3
RPS6KC1-206ENST00000543354 ESPNB1AK53 854 aa16.95■□□□□ 0.3
RPS6KC1-206ENST00000543354 PKNOX2Q96KN3 472 aa16.95■□□□□ 0.3
RPS6KC1-206ENST00000543354 GRPEL1Q9HAV7 217 aa16.95■□□□□ 0.3
RPS6KC1-206ENST00000543354 NUCB2P80303 420 aa16.95■□□□□ 0.3
RPS6KC1-206ENST00000543354 LMOD3Q0VAK6 560 aa16.95■□□□□ 0.3
RPS6KC1-206ENST00000543354 AMPHP49418 695 aa16.94■□□□□ 0.3
RPS6KC1-206ENST00000543354 TNNT3P45378 269 aaPredicted RBP16.94■□□□□ 0.3
RPS6KC1-206ENST00000543354 NGEFQ8N5V2 710 aa16.93■□□□□ 0.3
RPS6KC1-206ENST00000543354 FBXW7Q969H0 707 aa16.93■□□□□ 0.3
RPS6KC1-206ENST00000543354 EIF2S2P20042 333 aaKnown RBP16.93■□□□□ 0.3
RPS6KC1-206ENST00000543354 MIA2Q96PC5 1412 aa16.93■□□□□ 0.3
RPS6KC1-206ENST00000543354 NEK4P51957 841 aa16.92■□□□□ 0.3
RPS6KC1-206ENST00000543354 CREBRFQ8IUR6 639 aa16.92■□□□□ 0.3
RPS6KC1-206ENST00000543354 GAPVD1Q14C86 1478 aa16.92■□□□□ 0.3
RPS6KC1-206ENST00000543354 TOP2BQ02880 1626 aa16.92■□□□□ 0.3
RPS6KC1-206ENST00000543354 AFAP1Q8N556 730 aa16.91■□□□□ 0.3
RPS6KC1-206ENST00000543354 NOB1Q9ULX3 412 aaKnown RBP16.91■□□□□ 0.3
RPS6KC1-206ENST00000543354 NGDNQ8NEJ9 315 aaKnown RBP16.91■□□□□ 0.3
RPS6KC1-206ENST00000543354 BECN2A8MW95 431 aa16.91■□□□□ 0.3
RPS6KC1-206ENST00000543354 INTS3Q68E01 1043 aaKnown RBP16.91■□□□□ 0.3
RPS6KC1-206ENST00000543354 FYCO1Q9BQS8 1478 aa16.9■□□□□ 0.3
RPS6KC1-206ENST00000543354 FKBP5Q13451 457 aaPredicted RBP16.9■□□□□ 0.3
RPS6KC1-206ENST00000543354 SF3A1Q15459 793 aaKnown RBP16.9■□□□□ 0.3
RPS6KC1-206ENST00000543354 ZNF771Q7L3S4 317 aaPredicted RBP16.9■□□□□ 0.3
RPS6KC1-206ENST00000543354 API5Q9BZZ5 524 aaKnown RBP16.9■□□□□ 0.3
RPS6KC1-206ENST00000543354 HTATSF1O43719 755 aaKnown RBP16.9■□□□□ 0.3
RPS6KC1-206ENST00000543354 AQRO60306 1485 aaKnown RBP eCLIP16.9■□□□□ 0.32e-14■■■□□ 18.8
RPS6KC1-206ENST00000543354 SLFN5Q08AF3 891 aa16.89■□□□□ 0.29
RPS6KC1-206ENST00000543354 CCAR2Q8N163 923 aaKnown RBP16.89■□□□□ 0.29
RPS6KC1-206ENST00000543354 A0A0U1RQG5 324 aaPredicted RBP16.89■□□□□ 0.29
RPS6KC1-206ENST00000543354 CDC45O75419 566 aa16.89■□□□□ 0.29
RPS6KC1-206ENST00000543354 CCDC27Q2M243 656 aa16.89■□□□□ 0.29
RPS6KC1-206ENST00000543354 GOLGA6L19H0YKK7 550 aa16.89■□□□□ 0.29
RPS6KC1-206ENST00000543354 CSPP1Q1MSJ5 1256 aa16.89■□□□□ 0.29
RPS6KC1-206ENST00000543354 CUX1P39880 1505 aa16.89■□□□□ 0.29
RPS6KC1-206ENST00000543354 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.88■□□□□ 0.29
RPS6KC1-206ENST00000543354 DIAPH3Q9NSV4 1193 aa16.88■□□□□ 0.29
RPS6KC1-206ENST00000543354 H3BQV1 296 aa16.88■□□□□ 0.29
RPS6KC1-206ENST00000543354 FOSBP53539 338 aa16.88■□□□□ 0.29
RPS6KC1-206ENST00000543354 IFFO2Q5TF58 517 aa16.88■□□□□ 0.29
RPS6KC1-206ENST00000543354 COG3Q96JB2 828 aa16.88■□□□□ 0.29
RPS6KC1-206ENST00000543354 VGFO15240 615 aaPredicted RBP16.87■□□□□ 0.29
RPS6KC1-206ENST00000543354 PTPRKQ15262 1439 aa16.87■□□□□ 0.29
RPS6KC1-206ENST00000543354 PTPRGP23470 1445 aa16.87■□□□□ 0.29
RPS6KC1-206ENST00000543354 GORABQ5T7V8 394 aa16.87■□□□□ 0.29
RPS6KC1-206ENST00000543354 TBC1D2Q9BYX2 928 aa16.87■□□□□ 0.29
RPS6KC1-206ENST00000543354 ATP6V1DQ9Y5K8 247 aa16.87■□□□□ 0.29
RPS6KC1-206ENST00000543354 CC2D2AQ9P2K1 1620 aa16.87■□□□□ 0.29
RPS6KC1-206ENST00000543354 KIAA1107Q9UPP5 1409 aa16.86■□□□□ 0.29
RPS6KC1-206ENST00000543354 UBE2Q2Q8WVN8 375 aa16.86■□□□□ 0.29
RPS6KC1-206ENST00000543354 GPATCH3Q96I76 525 aa16.86■□□□□ 0.29
RPS6KC1-206ENST00000543354 PRKAR2BP31323 418 aa16.86■□□□□ 0.29
RPS6KC1-206ENST00000543354 WWC1Q8IX03 1113 aa16.86■□□□□ 0.29
RPS6KC1-206ENST00000543354 BICD2Q8TD16 824 aa16.86■□□□□ 0.29
RPS6KC1-206ENST00000543354 ZNF428Q96B54 188 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms