RNA–Protein interactions for RNA: ENST00000543199.5

GPN3-203, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5 BASIC

Gene GPN3, Length 1,604 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-203ENST00000543199 KCNA6P17658 529 aa19.76■□□□□ 0.75
GPN3-203ENST00000543199 RBM33Q96EV2 1170 aaKnown RBP19.76■□□□□ 0.75
GPN3-203ENST00000543199 BCANQ96GW7 911 aa19.76■□□□□ 0.75
GPN3-203ENST00000543199 PROSER2Q86WR7 435 aaPredicted RBP19.73■□□□□ 0.75
GPN3-203ENST00000543199 GCC2Q8IWJ2 1684 aa19.71■□□□□ 0.75
GPN3-203ENST00000543199 MYO5BQ9ULV0 1848 aa19.71■□□□□ 0.75
GPN3-203ENST00000543199 ZFYVE9O95405 1425 aa19.71■□□□□ 0.75
GPN3-203ENST00000543199 FAM135BQ49AJ0 1406 aa19.71■□□□□ 0.75
GPN3-203ENST00000543199 UNC13BO14795 1591 aa19.7■□□□□ 0.74
GPN3-203ENST00000543199 NWD1Q149M9 1564 aa19.7■□□□□ 0.74
GPN3-203ENST00000543199 PPP1R15AO75807 674 aaPredicted RBP19.7■□□□□ 0.74
GPN3-203ENST00000543199 NKTRP30414 1462 aaKnown RBP19.7■□□□□ 0.74
GPN3-203ENST00000543199 RIMS2Q9UQ26 1411 aa19.69■□□□□ 0.74
GPN3-203ENST00000543199 CHGAP10645 457 aaKnown RBP19.69■□□□□ 0.74
GPN3-203ENST00000543199 PLEKHG1Q9ULL1 1385 aa19.68■□□□□ 0.74
GPN3-203ENST00000543199 TMEM131LA2VDJ0 1609 aa19.68■□□□□ 0.74
GPN3-203ENST00000543199 ROBO1Q9Y6N7 1651 aa19.67■□□□□ 0.74
GPN3-203ENST00000543199 ITGAEP38570 1179 aa19.66■□□□□ 0.74
GPN3-203ENST00000543199 E9PCH4 1651 aa19.66■□□□□ 0.74
GPN3-203ENST00000543199 ROCK1Q13464 1354 aa19.66■□□□□ 0.74
GPN3-203ENST00000543199 HDGFP51858 240 aaKnown RBP19.65■□□□□ 0.74
GPN3-203ENST00000543199 MSH6P52701 1360 aa19.65■□□□□ 0.74
GPN3-203ENST00000543199 NUTM2DQ5VT03 806 aaPredicted RBP19.65■□□□□ 0.74
GPN3-203ENST00000543199 PPARGC1BQ86YN6 1023 aaKnown RBP19.64■□□□□ 0.73
GPN3-203ENST00000543199 IQGAP3Q86VI3 1631 aa19.63■□□□□ 0.73
GPN3-203ENST00000543199 RGS17Q9UGC6 210 aaPredicted RBP19.63■□□□□ 0.73
GPN3-203ENST00000543199 NUP155O75694 1391 aa19.62■□□□□ 0.73
GPN3-203ENST00000543199 CHD2O14647 1828 aaKnown RBP19.61■□□□□ 0.73
GPN3-203ENST00000543199 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.61■□□□□ 0.73
GPN3-203ENST00000543199 SLAIN2Q9P270 581 aa19.59■□□□□ 0.73
GPN3-203ENST00000543199 TBX22Q9Y458 520 aa19.59■□□□□ 0.73
GPN3-203ENST00000543199 ADAMTS13Q76LX8 1427 aa19.58■□□□□ 0.72
GPN3-203ENST00000543199 C14orf37Q86TY3 774 aa19.57■□□□□ 0.72
GPN3-203ENST00000543199 DIP2AQ14689 1571 aa19.54■□□□□ 0.72
GPN3-203ENST00000543199 PHLPP1O60346 1717 aa19.54■□□□□ 0.72
GPN3-203ENST00000543199 POTEAQ6S8J7 498 aa19.52■□□□□ 0.72
GPN3-203ENST00000543199 NCOA3Q9Y6Q9 1424 aa19.52■□□□□ 0.71
GPN3-203ENST00000543199 PIK3R4Q99570 1358 aa19.51■□□□□ 0.71
GPN3-203ENST00000543199 TRPM2O94759 1503 aa19.5■□□□□ 0.71
GPN3-203ENST00000543199 JCADQ9P266 1359 aa19.5■□□□□ 0.71
GPN3-203ENST00000543199 AMOTL2Q9Y2J4 779 aa19.49■□□□□ 0.71
GPN3-203ENST00000543199 PTPRUQ92729 1446 aa19.49■□□□□ 0.71
GPN3-203ENST00000543199 SPHKAPQ2M3C7 1700 aa19.49■□□□□ 0.71
GPN3-203ENST00000543199 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.49■□□□□ 0.71
GPN3-203ENST00000543199 ATF3P18847 181 aa19.48■□□□□ 0.71
GPN3-203ENST00000543199 CADPS2Q86UW7 1296 aa19.48■□□□□ 0.71
GPN3-203ENST00000543199 C19orf44Q9H6X5 657 aa19.48■□□□□ 0.71
GPN3-203ENST00000543199 COL16A1Q07092 1604 aaPredicted RBP19.48■□□□□ 0.71
GPN3-203ENST00000543199 ZNF326Q5BKZ1 582 aaKnown RBP19.47■□□□□ 0.71
GPN3-203ENST00000543199 NRXN3Q9Y4C0 1643 aa19.46■□□□□ 0.71
GPN3-203ENST00000543199 SETBP1Q9Y6X0 1596 aa19.44■□□□□ 0.7
GPN3-203ENST00000543199 AHDC1Q5TGY3 1603 aaPredicted RBP19.42■□□□□ 0.7
GPN3-203ENST00000543199 XRN1Q8IZH2 1706 aaKnown RBP19.42■□□□□ 0.7
GPN3-203ENST00000543199 METP08581 1390 aa19.41■□□□□ 0.7
GPN3-203ENST00000543199 RRBP1Q9P2E9 1410 aaKnown RBP19.41■□□□□ 0.7
GPN3-203ENST00000543199 LRP6O75581 1613 aa19.41■□□□□ 0.7
GPN3-203ENST00000543199 CLTCL1P53675 1640 aa19.41■□□□□ 0.7
GPN3-203ENST00000543199 BRINP3Q76B58 766 aa19.4■□□□□ 0.7
GPN3-203ENST00000543199 NAIPQ13075 1403 aa19.4■□□□□ 0.7
GPN3-203ENST00000543199 SPATA31A6Q5VVP1 1343 aa19.4■□□□□ 0.7
GPN3-203ENST00000543199 MEX3CQ5U5Q3 659 aaKnown RBP19.39■□□□□ 0.69
GPN3-203ENST00000543199 NEXMIFQ5QGS0 1516 aa19.38■□□□□ 0.69
GPN3-203ENST00000543199 DCCP43146 1447 aa19.38■□□□□ 0.69
GPN3-203ENST00000543199 SETD1AO15047 1707 aaKnown RBP19.37■□□□□ 0.69
GPN3-203ENST00000543199 ASXL1Q8IXJ9 1541 aa19.36■□□□□ 0.69
GPN3-203ENST00000543199 SHPRHQ149N8 1683 aa19.36■□□□□ 0.69
GPN3-203ENST00000543199 MST1RQ04912 1400 aa19.35■□□□□ 0.69
GPN3-203ENST00000543199 TRIM52Q96A61 297 aa19.34■□□□□ 0.69
GPN3-203ENST00000543199 KIF1BO60333 1816 aa19.33■□□□□ 0.69
GPN3-203ENST00000543199 ADGRL3Q9HAR2 1447 aa19.33■□□□□ 0.68
GPN3-203ENST00000543199 NUTM2BA6NNL0 878 aaPredicted RBP19.33■□□□□ 0.68
GPN3-203ENST00000543199 NUTM2EB1AL46 878 aaPredicted RBP19.33■□□□□ 0.68
GPN3-203ENST00000543199 NUTM2AQ8IVF1 878 aaPredicted RBP19.33■□□□□ 0.68
GPN3-203ENST00000543199 ZNF772Q68DY9 489 aaPredicted RBP19.31■□□□□ 0.68
GPN3-203ENST00000543199 NALCNQ8IZF0 1738 aa19.31■□□□□ 0.68
GPN3-203ENST00000543199 HFM1A2PYH4 1435 aa19.31■□□□□ 0.68
GPN3-203ENST00000543199 DDX17Q92841 729 aaKnown RBP19.29■□□□□ 0.68
GPN3-203ENST00000543199 NHSL1Q5SYE7 1610 aa19.29■□□□□ 0.68
GPN3-203ENST00000543199 SLC4A1APQ9BWU0 796 aaKnown RBP19.29■□□□□ 0.68
GPN3-203ENST00000543199 SETD5Q9C0A6 1442 aa19.28■□□□□ 0.68
GPN3-203ENST00000543199 VGFO15240 615 aaPredicted RBP19.27■□□□□ 0.68
GPN3-203ENST00000543199 LRRC59Q96AG4 307 aaKnown RBP19.25■□□□□ 0.67
GPN3-203ENST00000543199 ROBO2Q9HCK4 1378 aa19.25■□□□□ 0.67
GPN3-203ENST00000543199 PTCH1Q13635 1447 aa19.25■□□□□ 0.67
GPN3-203ENST00000543199 C1orf167Q5SNV9 1468 aa19.23■□□□□ 0.67
GPN3-203ENST00000543199 AFF2P51816 1311 aa19.23■□□□□ 0.67
GPN3-203ENST00000543199 RXRBP28702 533 aa19.22■□□□□ 0.67
GPN3-203ENST00000543199 RPGRIP1LQ68CZ1 1315 aa19.22■□□□□ 0.67
GPN3-203ENST00000543199 PNPLA6Q8IY17 1366 aa19.22■□□□□ 0.67
GPN3-203ENST00000543199 C8orf37Q96NL8 207 aa19.21■□□□□ 0.67
GPN3-203ENST00000543199 PPLO60437 1756 aa19.2■□□□□ 0.66
GPN3-203ENST00000543199 ORAI2Q96SN7 254 aa19.19■□□□□ 0.66
GPN3-203ENST00000543199 PRAG1Q86YV5 1406 aa19.18■□□□□ 0.66
GPN3-203ENST00000543199 UPF1Q92900 1129 aaKnown RBP eCLIP19.18■□□□□ 0.66
GPN3-203ENST00000543199 ADAMTS2O95450 1211 aa19.16■□□□□ 0.66
GPN3-203ENST00000543199 CCDC144AA2RUR9 1427 aa19.16■□□□□ 0.66
GPN3-203ENST00000543199 RGL3Q3MIN7 710 aa19.15■□□□□ 0.66
GPN3-203ENST00000543199 ADGRF5Q8IZF2 1346 aa19.15■□□□□ 0.66
GPN3-203ENST00000543199 LAMC1P11047 1609 aa19.14■□□□□ 0.65
GPN3-203ENST00000543199 CDK12Q9NYV4 1490 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms