RNA–Protein interactions for RNA: ENST00000542966.1

SCNN1A-219, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 560 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-219ENST00000542966 RIMS2Q9UQ26 1411 aa24.86■■□□□ 1.57
SCNN1A-219ENST00000542966 MYO5BQ9ULV0 1848 aa24.86■■□□□ 1.57
SCNN1A-219ENST00000542966 PPP1R15AO75807 674 aaPredicted RBP24.86■■□□□ 1.57
SCNN1A-219ENST00000542966 ZFYVE9O95405 1425 aa24.86■■□□□ 1.57
SCNN1A-219ENST00000542966 SCAF1Q9H7N4 1312 aaKnown RBP24.86■■□□□ 1.57
SCNN1A-219ENST00000542966 PIP4K2BP78356 416 aa24.85■■□□□ 1.57
SCNN1A-219ENST00000542966 LRRC7Q96NW7 1537 aa24.85■■□□□ 1.57
SCNN1A-219ENST00000542966 TOM1O60784 492 aa24.83■■□□□ 1.57
SCNN1A-219ENST00000542966 HSPA1LP34931 641 aa24.83■■□□□ 1.57
SCNN1A-219ENST00000542966 HDGFP51858 240 aaKnown RBP24.83■■□□□ 1.57
SCNN1A-219ENST00000542966 NUTM2DQ5VT03 806 aaPredicted RBP24.82■■□□□ 1.56
SCNN1A-219ENST00000542966 SPHKAPQ2M3C7 1700 aa24.81■■□□□ 1.56
SCNN1A-219ENST00000542966 PLEKHG1Q9ULL1 1385 aa24.8■■□□□ 1.56
SCNN1A-219ENST00000542966 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.79■■□□□ 1.56
SCNN1A-219ENST00000542966 SLC4A1APQ9BWU0 796 aaKnown RBP24.77■■□□□ 1.56
SCNN1A-219ENST00000542966 KCNA6P17658 529 aa24.76■■□□□ 1.55
SCNN1A-219ENST00000542966 ZNF326Q5BKZ1 582 aaKnown RBP24.74■■□□□ 1.55
SCNN1A-219ENST00000542966 TRPM2O94759 1503 aa24.72■■□□□ 1.55
SCNN1A-219ENST00000542966 CLTCL1P53675 1640 aa24.72■■□□□ 1.55
SCNN1A-219ENST00000542966 ALKQ9UM73 1620 aa24.71■■□□□ 1.55
SCNN1A-219ENST00000542966 PROSER2Q86WR7 435 aaPredicted RBP24.7■■□□□ 1.54
SCNN1A-219ENST00000542966 RBM33Q96EV2 1170 aaKnown RBP24.7■■□□□ 1.54
SCNN1A-219ENST00000542966 TMEM94Q12767 1356 aa24.69■■□□□ 1.54
SCNN1A-219ENST00000542966 TBX22Q9Y458 520 aa24.69■■□□□ 1.54
SCNN1A-219ENST00000542966 FOXD1Q16676 465 aa24.68■■□□□ 1.54
SCNN1A-219ENST00000542966 ADAMTS13Q76LX8 1427 aa24.68■■□□□ 1.54
SCNN1A-219ENST00000542966 NWD1Q149M9 1564 aa24.67■■□□□ 1.54
SCNN1A-219ENST00000542966 XIRP1Q702N8 1843 aaKnown RBP24.67■■□□□ 1.54
SCNN1A-219ENST00000542966 NKTRP30414 1462 aaKnown RBP24.65■■□□□ 1.54
SCNN1A-219ENST00000542966 SETD5Q9C0A6 1442 aa24.62■■□□□ 1.53
SCNN1A-219ENST00000542966 MPHOSPH9Q99550 1183 aa24.62■■□□□ 1.53
SCNN1A-219ENST00000542966 DIP2AQ14689 1571 aa24.62■■□□□ 1.53
SCNN1A-219ENST00000542966 CHD2O14647 1828 aaKnown RBP24.61■■□□□ 1.53
SCNN1A-219ENST00000542966 KIF1BO60333 1816 aa24.61■■□□□ 1.53
SCNN1A-219ENST00000542966 MED1Q15648 1581 aaPredicted RBP24.6■■□□□ 1.53
SCNN1A-219ENST00000542966 NEXMIFQ5QGS0 1516 aa24.6■■□□□ 1.53
SCNN1A-219ENST00000542966 PIK3R4Q99570 1358 aa24.57■■□□□ 1.52
SCNN1A-219ENST00000542966 NRXN3Q9Y4C0 1643 aa24.57■■□□□ 1.52
SCNN1A-219ENST00000542966 SETBP1Q9Y6X0 1596 aa24.56■■□□□ 1.52
SCNN1A-219ENST00000542966 PHF23Q9BUL5 403 aaPredicted RBP24.56■■□□□ 1.52
SCNN1A-219ENST00000542966 MSH6P52701 1360 aa24.55■■□□□ 1.52
SCNN1A-219ENST00000542966 RAB3GAP2Q9H2M9 1393 aa24.55■■□□□ 1.52
SCNN1A-219ENST00000542966 AMOTL2Q9Y2J4 779 aa24.55■■□□□ 1.52
SCNN1A-219ENST00000542966 PTPRUQ92729 1446 aa24.54■■□□□ 1.52
SCNN1A-219ENST00000542966 CCDC144AA2RUR9 1427 aa24.53■■□□□ 1.52
SCNN1A-219ENST00000542966 C14orf37Q86TY3 774 aa24.52■■□□□ 1.52
SCNN1A-219ENST00000542966 ACIN1Q9UKV3 1341 aaKnown RBP24.52■■□□□ 1.52
SCNN1A-219ENST00000542966 METP08581 1390 aa24.51■■□□□ 1.51
SCNN1A-219ENST00000542966 VGFO15240 615 aaPredicted RBP24.5■■□□□ 1.51
SCNN1A-219ENST00000542966 RPGRIP1LQ68CZ1 1315 aa24.5■■□□□ 1.51
SCNN1A-219ENST00000542966 FAM135BQ49AJ0 1406 aa24.47■■□□□ 1.51
SCNN1A-219ENST00000542966 NCOA3Q9Y6Q9 1424 aa24.47■■□□□ 1.51
SCNN1A-219ENST00000542966 RGL3Q3MIN7 710 aa24.47■■□□□ 1.51
SCNN1A-219ENST00000542966 SLAIN2Q9P270 581 aa24.44■■□□□ 1.5
SCNN1A-219ENST00000542966 XRN1Q8IZH2 1706 aaKnown RBP24.44■■□□□ 1.5
SCNN1A-219ENST00000542966 C19orf44Q9H6X5 657 aa24.43■■□□□ 1.5
SCNN1A-219ENST00000542966 PPLO60437 1756 aa24.43■■□□□ 1.5
SCNN1A-219ENST00000542966 ROBO1Q9Y6N7 1651 aa24.43■■□□□ 1.5
SCNN1A-219ENST00000542966 SPATA31E1Q6ZUB1 1445 aa24.43■■□□□ 1.5
SCNN1A-219ENST00000542966 ATF3P18847 181 aa24.41■■□□□ 1.5
SCNN1A-219ENST00000542966 ADGRF5Q8IZF2 1346 aa24.39■■□□□ 1.5
SCNN1A-219ENST00000542966 CADPS2Q86UW7 1296 aa24.39■■□□□ 1.49
SCNN1A-219ENST00000542966 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.38■■□□□ 1.49
SCNN1A-219ENST00000542966 RGS17Q9UGC6 210 aaPredicted RBP24.37■■□□□ 1.49
SCNN1A-219ENST00000542966 SETD1AO15047 1707 aaKnown RBP24.36■■□□□ 1.49
SCNN1A-219ENST00000542966 ANKRD30BQ9BXX2 1392 aa24.35■■□□□ 1.49
SCNN1A-219ENST00000542966 HRCP23327 699 aa24.33■■□□□ 1.49
SCNN1A-219ENST00000542966 IFT172Q9UG01 1749 aa24.32■■□□□ 1.48
SCNN1A-219ENST00000542966 ROBO2Q9HCK4 1378 aa24.31■■□□□ 1.48
SCNN1A-219ENST00000542966 DCCP43146 1447 aa24.3■■□□□ 1.48
SCNN1A-219ENST00000542966 PTCH1Q13635 1447 aa24.3■■□□□ 1.48
SCNN1A-219ENST00000542966 ADGRL3Q9HAR2 1447 aa24.29■■□□□ 1.48
SCNN1A-219ENST00000542966 PHLPP1O60346 1717 aa24.27■■□□□ 1.48
SCNN1A-219ENST00000542966 PIK3C2GO75747 1445 aa24.27■■□□□ 1.48
SCNN1A-219ENST00000542966 STK26Q9P289 416 aa24.26■■□□□ 1.47
SCNN1A-219ENST00000542966 NALCNQ8IZF0 1738 aa24.26■■□□□ 1.47
SCNN1A-219ENST00000542966 TMEM132EQ6IEE7 984 aa24.25■■□□□ 1.47
SCNN1A-219ENST00000542966 BRINP3Q76B58 766 aa24.25■■□□□ 1.47
SCNN1A-219ENST00000542966 MST1RQ04912 1400 aa24.25■■□□□ 1.47
SCNN1A-219ENST00000542966 PRAG1Q86YV5 1406 aa24.24■■□□□ 1.47
SCNN1A-219ENST00000542966 ASXL1Q8IXJ9 1541 aa24.21■■□□□ 1.47
SCNN1A-219ENST00000542966 MYOM2P54296 1465 aa24.21■■□□□ 1.47
SCNN1A-219ENST00000542966 POTEAQ6S8J7 498 aa24.21■■□□□ 1.47
SCNN1A-219ENST00000542966 COL16A1Q07092 1604 aaPredicted RBP24.21■■□□□ 1.47
SCNN1A-219ENST00000542966 LRPPRCP42704 1394 aaKnown RBP24.19■■□□□ 1.46
SCNN1A-219ENST00000542966 JCADQ9P266 1359 aa24.19■■□□□ 1.46
SCNN1A-219ENST00000542966 CFAP70Q5T0N1 1121 aa24.19■■□□□ 1.46
SCNN1A-219ENST00000542966 C14orf93Q9H972 538 aaKnown RBP24.19■■□□□ 1.46
SCNN1A-219ENST00000542966 AHDC1Q5TGY3 1603 aaPredicted RBP24.19■■□□□ 1.46
SCNN1A-219ENST00000542966 NRXN1Q9ULB1 1477 aa24.19■■□□□ 1.46
SCNN1A-219ENST00000542966 WAPLQ7Z5K2 1190 aa24.18■■□□□ 1.46
SCNN1A-219ENST00000542966 KDM2AQ9Y2K7 1162 aa24.17■■□□□ 1.46
SCNN1A-219ENST00000542966 TECPR2O15040 1411 aa24.16■■□□□ 1.46
SCNN1A-219ENST00000542966 YTHDC2Q9H6S0 1430 aaKnown RBP24.16■■□□□ 1.46
SCNN1A-219ENST00000542966 ABCC11Q96J66 1382 aa24.16■■□□□ 1.46
SCNN1A-219ENST00000542966 C1orf167Q5SNV9 1468 aa24.15■■□□□ 1.46
SCNN1A-219ENST00000542966 DCAF11Q8TEB1 546 aa24.15■■□□□ 1.46
SCNN1A-219ENST00000542966 DDX17Q92841 729 aaKnown RBP24.15■■□□□ 1.46
SCNN1A-219ENST00000542966 PLEKHH1Q9ULM0 1364 aa24.14■■□□□ 1.45
SCNN1A-219ENST00000542966 KNDC1Q76NI1 1749 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms