RNA–Protein interactions for RNA: ENST00000542820.5

ZNF664-212, Transcript of zinc finger protein 664, human

TSL 1 (best)

Gene ZNF664, Length 802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF664-212	ENST00000542820	RIMS2	Q9UQ26	1411 aa		32.93	■■■□□ 2.86
ZNF664-212	ENST00000542820	RAB3GAP2	Q9H2M9	1393 aa		32.87	■■■□□ 2.85
ZNF664-212	ENST00000542820	KIF1B	O60333	1816 aa		32.86	■■■□□ 2.85
ZNF664-212	ENST00000542820	PLEKHG1	Q9ULL1	1385 aa		32.86	■■■□□ 2.85
ZNF664-212	ENST00000542820	MPHOSPH9	Q99550	1183 aa		32.85	■■■□□ 2.85
ZNF664-212	ENST00000542820	CHGA	P10645	457 aa	Known RBP	32.84	■■■□□ 2.85
ZNF664-212	ENST00000542820	HDGF	P51858	240 aa	Known RBP	32.83	■■■□□ 2.85
ZNF664-212	ENST00000542820	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.82	■■■□□ 2.84
ZNF664-212	ENST00000542820	HRC	P23327	699 aa		32.81	■■■□□ 2.84
ZNF664-212	ENST00000542820	FOXD1	Q16676	465 aa		32.77	■■■□□ 2.84
ZNF664-212	ENST00000542820	LRRC7	Q96NW7	1537 aa		32.77	■■■□□ 2.84
ZNF664-212	ENST00000542820	NEXMIF	Q5QGS0	1516 aa		32.76	■■■□□ 2.83
ZNF664-212	ENST00000542820	ADAMTS13	Q76LX8	1427 aa		32.76	■■■□□ 2.83
ZNF664-212	ENST00000542820	SLC26A8	Q96RN1	970 aa		32.74	■■■□□ 2.83
ZNF664-212	ENST00000542820	CHD2	O14647	1828 aa	Known RBP	32.74	■■■□□ 2.83
ZNF664-212	ENST00000542820	NWD1	Q149M9	1564 aa		32.74	■■■□□ 2.83
ZNF664-212	ENST00000542820	XIRP1	Q702N8	1843 aa	Known RBP	32.72	■■■□□ 2.83
ZNF664-212	ENST00000542820	NRXN3	Q9Y4C0	1643 aa		32.72	■■■□□ 2.83
ZNF664-212	ENST00000542820	DIP2A	Q14689	1571 aa		32.71	■■■□□ 2.83
ZNF664-212	ENST00000542820	PPP1R15A	O75807	674 aa	Predicted RBP	32.71	■■■□□ 2.83
ZNF664-212	ENST00000542820	TBX22	Q9Y458	520 aa		32.71	■■■□□ 2.83
ZNF664-212	ENST00000542820	KCNA6	P17658	529 aa		32.7	■■■□□ 2.83
ZNF664-212	ENST00000542820	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.7	■■■□□ 2.83
ZNF664-212	ENST00000542820	SETBP1	Q9Y6X0	1596 aa		32.7	■■■□□ 2.82
ZNF664-212	ENST00000542820	ALK	Q9UM73	1620 aa		32.66	■■■□□ 2.82
ZNF664-212	ENST00000542820	PPL	O60437	1756 aa		32.65	■■■□□ 2.82
ZNF664-212	ENST00000542820	CCDC144A	A2RUR9	1427 aa		32.65	■■■□□ 2.82
ZNF664-212	ENST00000542820	SPATA31E1	Q6ZUB1	1445 aa		32.65	■■■□□ 2.82
ZNF664-212	ENST00000542820	ZNF326	Q5BKZ1	582 aa	Known RBP	32.64	■■■□□ 2.82
ZNF664-212	ENST00000542820	NKTR	P30414	1462 aa	Known RBP	32.63	■■■□□ 2.81
ZNF664-212	ENST00000542820	RPGRIP1L	Q68CZ1	1315 aa		32.63	■■■□□ 2.81
ZNF664-212	ENST00000542820	PIK3R4	Q99570	1358 aa		32.62	■■■□□ 2.81
ZNF664-212	ENST00000542820	BCAN	Q96GW7	911 aa		32.61	■■■□□ 2.81
ZNF664-212	ENST00000542820	IFT172	Q9UG01	1749 aa		32.58	■■■□□ 2.81
ZNF664-212	ENST00000542820	UBAP1L	F5GYI3	381 aa		32.58	■■■□□ 2.81
ZNF664-212	ENST00000542820	SENP3	Q9H4L4	574 aa	Predicted RBP	32.58	■■■□□ 2.81
ZNF664-212	ENST00000542820	ANKRD30B	Q9BXX2	1392 aa		32.56	■■■□□ 2.8
ZNF664-212	ENST00000542820	SETD1A	O15047	1707 aa	Known RBP	32.55	■■■□□ 2.8
ZNF664-212	ENST00000542820	PTPRU	Q92729	1446 aa		32.53	■■■□□ 2.8
ZNF664-212	ENST00000542820	VGF	O15240	615 aa	Predicted RBP	32.53	■■■□□ 2.8
ZNF664-212	ENST00000542820	TMEM94	Q12767	1356 aa		32.53	■■■□□ 2.8
ZNF664-212	ENST00000542820	XRN1	Q8IZH2	1706 aa	Known RBP	32.51	■■■□□ 2.79
ZNF664-212	ENST00000542820	TOM1	O60784	492 aa		32.5	■■■□□ 2.79
ZNF664-212	ENST00000542820	PROSER2	Q86WR7	435 aa	Predicted RBP	32.48	■■■□□ 2.79
ZNF664-212	ENST00000542820	MET	P08581	1390 aa		32.47	■■■□□ 2.79
ZNF664-212	ENST00000542820	NCOA3	Q9Y6Q9	1424 aa		32.46	■■■□□ 2.79
ZNF664-212	ENST00000542820	AMOTL2	Q9Y2J4	779 aa		32.43	■■■□□ 2.78
ZNF664-212	ENST00000542820	RGL3	Q3MIN7	710 aa		32.42	■■■□□ 2.78
ZNF664-212	ENST00000542820	ADGRF5	Q8IZF2	1346 aa		32.41	■■■□□ 2.78
ZNF664-212	ENST00000542820	RBM33	Q96EV2	1170 aa	Known RBP	32.4	■■■□□ 2.78
ZNF664-212	ENST00000542820	PRAG1	Q86YV5	1406 aa		32.38	■■■□□ 2.77
ZNF664-212	ENST00000542820	NRXN1	Q9ULB1	1477 aa		32.37	■■■□□ 2.77
ZNF664-212	ENST00000542820	PIK3C2G	O75747	1445 aa		32.35	■■■□□ 2.77
ZNF664-212	ENST00000542820	MYOM2	P54296	1465 aa		32.35	■■■□□ 2.77
ZNF664-212	ENST00000542820	PIP4K2B	P78356	416 aa		32.33	■■■□□ 2.77
ZNF664-212	ENST00000542820	MSH6	P52701	1360 aa		32.32	■■■□□ 2.76
ZNF664-212	ENST00000542820	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.31	■■■□□ 2.76
ZNF664-212	ENST00000542820	PTCH1	Q13635	1447 aa		32.28	■■■□□ 2.76
ZNF664-212	ENST00000542820	FAM135B	Q49AJ0	1406 aa		32.28	■■■□□ 2.76
ZNF664-212	ENST00000542820	ASXL1	Q8IXJ9	1541 aa		32.27	■■■□□ 2.76
ZNF664-212	ENST00000542820	TRIM26	Q12899	539 aa	Predicted RBP	32.27	■■■□□ 2.76
ZNF664-212	ENST00000542820	HSPA1L	P34931	641 aa		32.25	■■■□□ 2.75
ZNF664-212	ENST00000542820	C19orf44	Q9H6X5	657 aa		32.25	■■■□□ 2.75
ZNF664-212	ENST00000542820	SCAF1	Q9H7N4	1312 aa	Known RBP	32.24	■■■□□ 2.75
ZNF664-212	ENST00000542820	DHX57	Q6P158	1386 aa	Known RBP	32.22	■■■□□ 2.75
ZNF664-212	ENST00000542820	ROBO2	Q9HCK4	1378 aa		32.22	■■■□□ 2.75
ZNF664-212	ENST00000542820	DCC	P43146	1447 aa		32.22	■■■□□ 2.75
ZNF664-212	ENST00000542820	C14orf93	Q9H972	538 aa	Known RBP	32.21	■■■□□ 2.75
ZNF664-212	ENST00000542820	LAMC1	P11047	1609 aa		32.21	■■■□□ 2.75
ZNF664-212	ENST00000542820	ROBO1	Q9Y6N7	1651 aa		32.21	■■■□□ 2.75
ZNF664-212	ENST00000542820	NALCN	Q8IZF0	1738 aa		32.2	■■■□□ 2.75
ZNF664-212	ENST00000542820	TECPR2	O15040	1411 aa		32.2	■■■□□ 2.75
ZNF664-212	ENST00000542820	KNDC1	Q76NI1	1749 aa		32.2	■■■□□ 2.74
ZNF664-212	ENST00000542820	ADGRL3	Q9HAR2	1447 aa		32.18	■■■□□ 2.74
ZNF664-212	ENST00000542820	STAC3	Q96MF2	364 aa		32.18	■■■□□ 2.74
ZNF664-212	ENST00000542820	SLAIN2	Q9P270	581 aa		32.18	■■■□□ 2.74
ZNF664-212	ENST00000542820	LRPPRC	P42704	1394 aa	Known RBP	32.17	■■■□□ 2.74
ZNF664-212	ENST00000542820	CADPS2	Q86UW7	1296 aa		32.16	■■■□□ 2.74
ZNF664-212	ENST00000542820	ABCC11	Q96J66	1382 aa		32.16	■■■□□ 2.74
ZNF664-212	ENST00000542820	C14orf37	Q86TY3	774 aa		32.13	■■■□□ 2.73
ZNF664-212	ENST00000542820	CFAP70	Q5T0N1	1121 aa		32.12	■■■□□ 2.73
ZNF664-212	ENST00000542820	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.11	■■■□□ 2.73
ZNF664-212	ENST00000542820	TMEM132E	Q6IEE7	984 aa		32.11	■■■□□ 2.73
ZNF664-212	ENST00000542820	DCAF11	Q8TEB1	546 aa		32.11	■■■□□ 2.73
ZNF664-212	ENST00000542820	ATF3	P18847	181 aa		32.1	■■■□□ 2.73
ZNF664-212	ENST00000542820	ADGRB1	O14514	1584 aa		32.1	■■■□□ 2.73
ZNF664-212	ENST00000542820	MST1R	Q04912	1400 aa		32.09	■■■□□ 2.73
ZNF664-212	ENST00000542820	SIRT1	Q96EB6	747 aa		32.06	■■■□□ 2.72
ZNF664-212	ENST00000542820	KDM2A	Q9Y2K7	1162 aa		32.04	■■■□□ 2.72
ZNF664-212	ENST00000542820	STK26	Q9P289	416 aa		32.01	■■■□□ 2.71
ZNF664-212	ENST00000542820	DLC1	Q96QB1	1528 aa		32	■■■□□ 2.71
ZNF664-212	ENST00000542820	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32	■■■□□ 2.71
ZNF664-212	ENST00000542820	CDC42BPG	Q6DT37	1551 aa		31.99	■■■□□ 2.71
ZNF664-212	ENST00000542820	PLEKHH1	Q9ULM0	1364 aa		31.99	■■■□□ 2.71
ZNF664-212	ENST00000542820	WAPL	Q7Z5K2	1190 aa		31.99	■■■□□ 2.71
ZNF664-212	ENST00000542820	PHLPP1	O60346	1717 aa		31.99	■■■□□ 2.71
ZNF664-212	ENST00000542820	KIAA1210	Q9ULL0	1709 aa		31.99	■■■□□ 2.71
ZNF664-212	ENST00000542820	COL16A1	Q07092	1604 aa	Predicted RBP	31.97	■■■□□ 2.71
ZNF664-212	ENST00000542820	BRINP3	Q76B58	766 aa		31.97	■■■□□ 2.71
ZNF664-212	ENST00000542820	SIN3A	Q96ST3	1273 aa		31.97	■■■□□ 2.71

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms