RNA–Protein interactions for RNA: ENST00000542778.5

NELFA-216, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best) BASIC

Gene NELFA, Length 2,465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-216ENST00000542778 TET3O43151 1660 aa22.61■■□□□ 1.21
NELFA-216ENST00000542778 CEP152O94986 1710 aa22.61■■□□□ 1.21
NELFA-216ENST00000542778 SPHKAPQ2M3C7 1700 aa22.61■■□□□ 1.21
NELFA-216ENST00000542778 POLR3GLQ9BT43 218 aa22.6■■□□□ 1.21
NELFA-216ENST00000542778 BACH2Q9BYV9 841 aa22.6■■□□□ 1.21
NELFA-216ENST00000542778 PRAG1Q86YV5 1406 aa22.6■■□□□ 1.21
NELFA-216ENST00000542778 CLTCL1P53675 1640 aa22.6■■□□□ 1.21
NELFA-216ENST00000542778 RICTORQ6R327 1708 aa22.6■■□□□ 1.21
NELFA-216ENST00000542778 KANK1Q14678 1352 aa22.59■■□□□ 1.21
NELFA-216ENST00000542778 YEATS2Q9ULM3 1422 aa22.59■■□□□ 1.21
NELFA-216ENST00000542778 GSE1Q14687 1217 aa22.59■■□□□ 1.21
NELFA-216ENST00000542778 PPRC1Q5VV67 1664 aaKnown RBP22.57■■□□□ 1.2
NELFA-216ENST00000542778 ROCK2O75116 1388 aaKnown RBP22.57■■□□□ 1.2
NELFA-216ENST00000542778 GLI2P10070 1586 aa22.57■■□□□ 1.2
NELFA-216ENST00000542778 TRPM2O94759 1503 aa22.56■■□□□ 1.2
NELFA-216ENST00000542778 TRPM1Q7Z4N2 1603 aa22.56■■□□□ 1.2
NELFA-216ENST00000542778 ST20-MTHFSA0A0A6YYL1 179 aa22.56■■□□□ 1.2
NELFA-216ENST00000542778 PTPRTO14522 1441 aa22.56■■□□□ 1.2
NELFA-216ENST00000542778 MS4A1P11836 297 aa22.55■■□□□ 1.2
NELFA-216ENST00000542778 DIP2CQ9Y2E4 1556 aa22.54■■□□□ 1.2
NELFA-216ENST00000542778 EIF5BO60841 1220 aaKnown RBP22.54■■□□□ 1.2
NELFA-216ENST00000542778 CNGB1Q14028 1251 aaPredicted RBP22.52■■□□□ 1.2
NELFA-216ENST00000542778 RNF17Q9BXT8 1623 aaKnown RBP22.52■■□□□ 1.2
NELFA-216ENST00000542778 EFCAB6Q5THR3 1501 aa22.52■■□□□ 1.2
NELFA-216ENST00000542778 EXOC6Q8TAG9 804 aa22.51■■□□□ 1.19
NELFA-216ENST00000542778 RRP1P56182 461 aaKnown RBP22.5■■□□□ 1.19
NELFA-216ENST00000542778 SENP3-EIF4A1A0A087X0R7 540 aa22.48■■□□□ 1.19
NELFA-216ENST00000542778 DDRGK1Q96HY6 314 aa22.48■■□□□ 1.19
NELFA-216ENST00000542778 NFKBIBQ15653 356 aa22.47■■□□□ 1.19
NELFA-216ENST00000542778 FRAT1Q92837 279 aaPredicted RBP22.47■■□□□ 1.19
NELFA-216ENST00000542778 NPATQ14207 1427 aa22.47■■□□□ 1.19
NELFA-216ENST00000542778 PNISRQ8TF01 805 aaKnown RBP22.46■■□□□ 1.19
NELFA-216ENST00000542778 KIF13AQ9H1H9 1805 aa22.45■■□□□ 1.19
NELFA-216ENST00000542778 MROH2AA6NES4 1674 aa22.44■■□□□ 1.18
NELFA-216ENST00000542778 ABCC3O15438 1527 aa22.43■■□□□ 1.18
NELFA-216ENST00000542778 LMTK2Q8IWU2 1503 aa22.43■■□□□ 1.18
NELFA-216ENST00000542778 MADDQ8WXG6 1647 aa22.42■■□□□ 1.18
NELFA-216ENST00000542778 SIGLEC1Q9BZZ2 1709 aa22.42■■□□□ 1.18
NELFA-216ENST00000542778 CHGAP10645 457 aaKnown RBP22.41■■□□□ 1.18
NELFA-216ENST00000542778 RSPH6AQ9H0K4 717 aa22.41■■□□□ 1.18
NELFA-216ENST00000542778 COL17A1Q9UMD9 1497 aaPredicted RBP22.41■■□□□ 1.18
NELFA-216ENST00000542778 GPRASP1Q5JY77 1395 aa22.39■■□□□ 1.18
NELFA-216ENST00000542778 ADGRF5Q8IZF2 1346 aa22.38■■□□□ 1.17
NELFA-216ENST00000542778 KIF1BO60333 1816 aa22.38■■□□□ 1.17
NELFA-216ENST00000542778 CAMSAP1Q5T5Y3 1602 aa22.37■■□□□ 1.17
NELFA-216ENST00000542778 LRPPRCP42704 1394 aaKnown RBP22.37■■□□□ 1.17
NELFA-216ENST00000542778 RCAN3Q9UKA8 241 aa22.37■■□□□ 1.17
NELFA-216ENST00000542778 FAM43AQ8N2R8 423 aa22.36■■□□□ 1.17
NELFA-216ENST00000542778 TMC1Q8TDI8 760 aa22.35■■□□□ 1.17
NELFA-216ENST00000542778 SENP3Q9H4L4 574 aaPredicted RBP22.35■■□□□ 1.17
NELFA-216ENST00000542778 NUTM2DQ5VT03 806 aaPredicted RBP22.34■■□□□ 1.17
NELFA-216ENST00000542778 TESK2Q96S53 571 aa22.34■■□□□ 1.17
NELFA-216ENST00000542778 DISP3Q9P2K9 1392 aa22.34■■□□□ 1.17
NELFA-216ENST00000542778 CFAP70Q5T0N1 1121 aa22.33■■□□□ 1.17
NELFA-216ENST00000542778 ZMYM4Q5VZL5 1548 aa22.33■■□□□ 1.17
NELFA-216ENST00000542778 SLC4A3P48751 1232 aa22.31■■□□□ 1.16
NELFA-216ENST00000542778 MLECQ14165 292 aa22.31■■□□□ 1.16
NELFA-216ENST00000542778 SYNMO15061 1565 aa22.3■■□□□ 1.16
NELFA-216ENST00000542778 LAMC1P11047 1609 aa22.3■■□□□ 1.16
NELFA-216ENST00000542778 IFT172Q9UG01 1749 aa22.29■■□□□ 1.16
NELFA-216ENST00000542778 FBXO31Q5XUX0 539 aaPredicted RBP22.29■■□□□ 1.16
NELFA-216ENST00000542778 NOS1P29475 1434 aa22.29■■□□□ 1.16
NELFA-216ENST00000542778 ADGRB3O60242 1522 aa22.28■■□□□ 1.16
NELFA-216ENST00000542778 SKAP1Q86WV1 359 aa22.28■■□□□ 1.16
NELFA-216ENST00000542778 ARID4BQ4LE39 1312 aaPredicted RBP22.26■■□□□ 1.15
NELFA-216ENST00000542778 IQGAP1P46940 1657 aa22.26■■□□□ 1.15
NELFA-216ENST00000542778 BRD4O60885 1362 aaPredicted RBP22.26■■□□□ 1.15
NELFA-216ENST00000542778 DAXXQ9UER7 740 aaPredicted RBP22.25■■□□□ 1.15
NELFA-216ENST00000542778 IDI1Q13907 227 aa22.24■■□□□ 1.15
NELFA-216ENST00000542778 PKNOX2Q96KN3 472 aa22.24■■□□□ 1.15
NELFA-216ENST00000542778 FRAT2O75474 233 aaPredicted RBP22.22■■□□□ 1.15
NELFA-216ENST00000542778 NEURL4Q96JN8 1562 aa22.22■■□□□ 1.15
NELFA-216ENST00000542778 PDE3BQ13370 1112 aa22.21■■□□□ 1.15
NELFA-216ENST00000542778 MYOM2P54296 1465 aa22.21■■□□□ 1.15
NELFA-216ENST00000542778 PPLO60437 1756 aa22.21■■□□□ 1.15
NELFA-216ENST00000542778 MYO5BQ9ULV0 1848 aa22.21■■□□□ 1.15
NELFA-216ENST00000542778 PIK3C2BO00750 1634 aa22.2■■□□□ 1.14
NELFA-216ENST00000542778 ZC3H13Q5T200 1668 aaKnown RBP22.2■■□□□ 1.14
NELFA-216ENST00000542778 MYBBP1AQ9BQG0 1328 aaKnown RBP22.2■■□□□ 1.14
NELFA-216ENST00000542778 SCAF11Q99590 1463 aaKnown RBP22.19■■□□□ 1.14
NELFA-216ENST00000542778 TMEM132EQ6IEE7 984 aa22.19■■□□□ 1.14
NELFA-216ENST00000542778 PREX1Q8TCU6 1659 aa22.19■■□□□ 1.14
NELFA-216ENST00000542778 ARHGAP31Q2M1Z3 1444 aa22.18■■□□□ 1.14
NELFA-216ENST00000542778 CRBNQ96SW2 442 aa22.17■■□□□ 1.14
NELFA-216ENST00000542778 CLTCQ00610 1675 aaKnown RBP22.17■■□□□ 1.14
NELFA-216ENST00000542778 NRXN1Q9ULB1 1477 aa22.17■■□□□ 1.14
NELFA-216ENST00000542778 PLIN1O60240 522 aa22.17■■□□□ 1.14
NELFA-216ENST00000542778 KTN1Q86UP2 1357 aaKnown RBP22.16■■□□□ 1.14
NELFA-216ENST00000542778 TMF1P82094 1093 aa22.16■■□□□ 1.14
NELFA-216ENST00000542778 STAC3Q96MF2 364 aa22.15■■□□□ 1.14
NELFA-216ENST00000542778 KIAA1210Q9ULL0 1709 aa22.15■■□□□ 1.14
NELFA-216ENST00000542778 RALBP1Q15311 655 aa22.14■■□□□ 1.13
NELFA-216ENST00000542778 PANK3Q9H999 370 aa22.14■■□□□ 1.13
NELFA-216ENST00000542778 PER1O15534 1290 aaPredicted RBP22.13■■□□□ 1.13
NELFA-216ENST00000542778 CDCA7LQ96GN5 454 aa22.13■■□□□ 1.13
NELFA-216ENST00000542778 ARHGEF40Q8TER5 1519 aa22.13■■□□□ 1.13
NELFA-216ENST00000542778 PIK3C2GO75747 1445 aa22.13■■□□□ 1.13
NELFA-216ENST00000542778 KDM2BQ8NHM5 1336 aa22.13■■□□□ 1.13
NELFA-216ENST00000542778 NEXMIFQ5QGS0 1516 aa22.12■■□□□ 1.13
NELFA-216ENST00000542778 TRAK1Q9UPV9 953 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms