RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 ZFYVE9O95405 1425 aa24.78■■□□□ 1.56
CCND1-205ENST00000542367 SENP3Q9H4L4 574 aaPredicted RBP24.77■■□□□ 1.56
CCND1-205ENST00000542367 RIMS2Q9UQ26 1411 aa24.77■■□□□ 1.56
CCND1-205ENST00000542367 PPP1R15AO75807 674 aaPredicted RBP24.75■■□□□ 1.55
CCND1-205ENST00000542367 HFM1A2PYH4 1435 aa24.74■■□□□ 1.55
CCND1-205ENST00000542367 KCNA6P17658 529 aa24.73■■□□□ 1.55
CCND1-205ENST00000542367 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.73■■□□□ 1.55
CCND1-205ENST00000542367 TRIM52Q96A61 297 aa24.73■■□□□ 1.55
CCND1-205ENST00000542367 PLEKHG1Q9ULL1 1385 aa24.72■■□□□ 1.55
CCND1-205ENST00000542367 NUTM2DQ5VT03 806 aaPredicted RBP24.72■■□□□ 1.55
CCND1-205ENST00000542367 SPHKAPQ2M3C7 1700 aa24.69■■□□□ 1.54
CCND1-205ENST00000542367 ALKQ9UM73 1620 aa24.68■■□□□ 1.54
CCND1-205ENST00000542367 HSPA1LP34931 641 aa24.67■■□□□ 1.54
CCND1-205ENST00000542367 PROSER2Q86WR7 435 aaPredicted RBP24.66■■□□□ 1.54
CCND1-205ENST00000542367 TBX22Q9Y458 520 aa24.65■■□□□ 1.54
CCND1-205ENST00000542367 XIRP1Q702N8 1843 aaKnown RBP24.65■■□□□ 1.54
CCND1-205ENST00000542367 RBM33Q96EV2 1170 aaKnown RBP24.64■■□□□ 1.54
CCND1-205ENST00000542367 SLC4A1APQ9BWU0 796 aaKnown RBP24.64■■□□□ 1.54
CCND1-205ENST00000542367 TMEM94Q12767 1356 aa24.64■■□□□ 1.53
CCND1-205ENST00000542367 DISP3Q9P2K9 1392 aa24.63■■□□□ 1.53
CCND1-205ENST00000542367 ZNF326Q5BKZ1 582 aaKnown RBP24.62■■□□□ 1.53
CCND1-205ENST00000542367 NWD1Q149M9 1564 aa24.6■■□□□ 1.53
CCND1-205ENST00000542367 ADAMTS13Q76LX8 1427 aa24.6■■□□□ 1.53
CCND1-205ENST00000542367 CLTCL1P53675 1640 aa24.59■■□□□ 1.53
CCND1-205ENST00000542367 TRPM2O94759 1503 aa24.59■■□□□ 1.53
CCND1-205ENST00000542367 CHD2O14647 1828 aaKnown RBP24.58■■□□□ 1.53
CCND1-205ENST00000542367 NKTRP30414 1462 aaKnown RBP24.58■■□□□ 1.53
CCND1-205ENST00000542367 DIP2AQ14689 1571 aa24.54■■□□□ 1.52
CCND1-205ENST00000542367 PIK3R4Q99570 1358 aa24.53■■□□□ 1.52
CCND1-205ENST00000542367 KIF1BO60333 1816 aa24.52■■□□□ 1.52
CCND1-205ENST00000542367 FOXD1Q16676 465 aa24.52■■□□□ 1.52
CCND1-205ENST00000542367 MPHOSPH9Q99550 1183 aa24.5■■□□□ 1.51
CCND1-205ENST00000542367 MSH6P52701 1360 aa24.5■■□□□ 1.51
CCND1-205ENST00000542367 AMOTL2Q9Y2J4 779 aa24.49■■□□□ 1.51
CCND1-205ENST00000542367 NEXMIFQ5QGS0 1516 aa24.48■■□□□ 1.51
CCND1-205ENST00000542367 SETBP1Q9Y6X0 1596 aa24.47■■□□□ 1.51
CCND1-205ENST00000542367 FAM135BQ49AJ0 1406 aa24.47■■□□□ 1.51
CCND1-205ENST00000542367 NRXN3Q9Y4C0 1643 aa24.46■■□□□ 1.51
CCND1-205ENST00000542367 PTPRUQ92729 1446 aa24.46■■□□□ 1.51
CCND1-205ENST00000542367 SETD5Q9C0A6 1442 aa24.45■■□□□ 1.51
CCND1-205ENST00000542367 ILDR2Q71H61 639 aa24.45■■□□□ 1.5
CCND1-205ENST00000542367 C14orf37Q86TY3 774 aa24.45■■□□□ 1.5
CCND1-205ENST00000542367 NCOA3Q9Y6Q9 1424 aa24.44■■□□□ 1.5
CCND1-205ENST00000542367 VGFO15240 615 aaPredicted RBP24.44■■□□□ 1.5
CCND1-205ENST00000542367 SLAIN2Q9P270 581 aa24.43■■□□□ 1.5
CCND1-205ENST00000542367 METP08581 1390 aa24.42■■□□□ 1.5
CCND1-205ENST00000542367 RPGRIP1LQ68CZ1 1315 aa24.42■■□□□ 1.5
CCND1-205ENST00000542367 ACIN1Q9UKV3 1341 aaKnown RBP24.42■■□□□ 1.5
CCND1-205ENST00000542367 C19orf44Q9H6X5 657 aa24.4■■□□□ 1.5
CCND1-205ENST00000542367 CCDC144AA2RUR9 1427 aa24.39■■□□□ 1.5
CCND1-205ENST00000542367 ROBO1Q9Y6N7 1651 aa24.39■■□□□ 1.49
CCND1-205ENST00000542367 MED1Q15648 1581 aaPredicted RBP24.37■■□□□ 1.49
CCND1-205ENST00000542367 RAB3GAP2Q9H2M9 1393 aa24.37■■□□□ 1.49
CCND1-205ENST00000542367 ATF3P18847 181 aa24.36■■□□□ 1.49
CCND1-205ENST00000542367 RGL3Q3MIN7 710 aa24.36■■□□□ 1.49
CCND1-205ENST00000542367 CADPS2Q86UW7 1296 aa24.36■■□□□ 1.49
CCND1-205ENST00000542367 XRN1Q8IZH2 1706 aaKnown RBP24.35■■□□□ 1.49
CCND1-205ENST00000542367 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.35■■□□□ 1.49
CCND1-205ENST00000542367 PPLO60437 1756 aa24.33■■□□□ 1.49
CCND1-205ENST00000542367 SPATA31E1Q6ZUB1 1445 aa24.3■■□□□ 1.48
CCND1-205ENST00000542367 ADGRF5Q8IZF2 1346 aa24.29■■□□□ 1.48
CCND1-205ENST00000542367 SETD1AO15047 1707 aaKnown RBP24.27■■□□□ 1.48
CCND1-205ENST00000542367 PHF23Q9BUL5 403 aaPredicted RBP24.27■■□□□ 1.48
CCND1-205ENST00000542367 ANKRD30BQ9BXX2 1392 aa24.25■■□□□ 1.47
CCND1-205ENST00000542367 DCCP43146 1447 aa24.25■■□□□ 1.47
CCND1-205ENST00000542367 PHLPP1O60346 1717 aa24.24■■□□□ 1.47
CCND1-205ENST00000542367 ROBO2Q9HCK4 1378 aa24.22■■□□□ 1.47
CCND1-205ENST00000542367 SOCS7O14512 581 aa24.22■■□□□ 1.47
CCND1-205ENST00000542367 HRCP23327 699 aa24.22■■□□□ 1.47
CCND1-205ENST00000542367 ADGRL3Q9HAR2 1447 aa24.21■■□□□ 1.47
CCND1-205ENST00000542367 BRINP3Q76B58 766 aa24.21■■□□□ 1.47
CCND1-205ENST00000542367 IFT172Q9UG01 1749 aa24.21■■□□□ 1.47
CCND1-205ENST00000542367 PTCH1Q13635 1447 aa24.2■■□□□ 1.46
CCND1-205ENST00000542367 MST1RQ04912 1400 aa24.18■■□□□ 1.46
CCND1-205ENST00000542367 NALCNQ8IZF0 1738 aa24.18■■□□□ 1.46
CCND1-205ENST00000542367 JCADQ9P266 1359 aa24.17■■□□□ 1.46
CCND1-205ENST00000542367 PRAG1Q86YV5 1406 aa24.17■■□□□ 1.46
CCND1-205ENST00000542367 COL16A1Q07092 1604 aaPredicted RBP24.17■■□□□ 1.46
CCND1-205ENST00000542367 STK26Q9P289 416 aa24.16■■□□□ 1.46
CCND1-205ENST00000542367 AHDC1Q5TGY3 1603 aaPredicted RBP24.15■■□□□ 1.46
CCND1-205ENST00000542367 TMEM132EQ6IEE7 984 aa24.15■■□□□ 1.46
CCND1-205ENST00000542367 PIK3C2GO75747 1445 aa24.15■■□□□ 1.46
CCND1-205ENST00000542367 RGS17Q9UGC6 210 aaPredicted RBP24.13■■□□□ 1.45
CCND1-205ENST00000542367 ASXL1Q8IXJ9 1541 aa24.12■■□□□ 1.45
CCND1-205ENST00000542367 LRPPRCP42704 1394 aaKnown RBP24.11■■□□□ 1.45
CCND1-205ENST00000542367 C14orf93Q9H972 538 aaKnown RBP24.1■■□□□ 1.45
CCND1-205ENST00000542367 WAPLQ7Z5K2 1190 aa24.09■■□□□ 1.45
CCND1-205ENST00000542367 C1orf167Q5SNV9 1468 aa24.08■■□□□ 1.45
CCND1-205ENST00000542367 ABCC11Q96J66 1382 aa24.08■■□□□ 1.45
CCND1-205ENST00000542367 CFAP70Q5T0N1 1121 aa24.08■■□□□ 1.45
CCND1-205ENST00000542367 MYOM2P54296 1465 aa24.07■■□□□ 1.44
CCND1-205ENST00000542367 NRXN1Q9ULB1 1477 aa24.07■■□□□ 1.44
CCND1-205ENST00000542367 DDX17Q92841 729 aaKnown RBP24.07■■□□□ 1.44
CCND1-205ENST00000542367 TECPR2O15040 1411 aa24.07■■□□□ 1.44
CCND1-205ENST00000542367 ORAI2Q96SN7 254 aa24.06■■□□□ 1.44
CCND1-205ENST00000542367 SPATA31A6Q5VVP1 1343 aa24.06■■□□□ 1.44
CCND1-205ENST00000542367 YTHDC2Q9H6S0 1430 aaKnown RBP24.05■■□□□ 1.44
CCND1-205ENST00000542367 NHSL1Q5SYE7 1610 aa24.05■■□□□ 1.44
CCND1-205ENST00000542367 KDM2AQ9Y2K7 1162 aa24.04■■□□□ 1.44
CCND1-205ENST00000542367 DCAF11Q8TEB1 546 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms