RNA–Protein interactions for RNA: ENST00000542242.1

DDX11-219, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 795 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-219ENST00000542242 ADGRB3O60242 1522 aa20.98■□□□□ 0.95
DDX11-219ENST00000542242 IDI1Q13907 227 aa20.96■□□□□ 0.95
DDX11-219ENST00000542242 MED14O60244 1454 aa20.94■□□□□ 0.94
DDX11-219ENST00000542242 TRPM2O94759 1503 aa20.94■□□□□ 0.94
DDX11-219ENST00000542242 SLC52A1Q9NWF4 448 aa20.92■□□□□ 0.94
DDX11-219ENST00000542242 CLTCL1P53675 1640 aa20.91■□□□□ 0.94
DDX11-219ENST00000542242 THEMISQ8N1K5 641 aaPredicted RBP20.91■□□□□ 0.94
DDX11-219ENST00000542242 NCKAP5LQ9HCH0 1330 aa20.91■□□□□ 0.94
DDX11-219ENST00000542242 IQGAP1P46940 1657 aa20.89■□□□□ 0.93
DDX11-219ENST00000542242 L3MBTL2Q969R5 705 aa20.88■□□□□ 0.93
DDX11-219ENST00000542242 TMEM2Q9UHN6 1383 aa20.87■□□□□ 0.93
DDX11-219ENST00000542242 ZFYVE9O95405 1425 aa20.87■□□□□ 0.93
DDX11-219ENST00000542242 LTBP4Q8N2S1 1624 aa20.86■□□□□ 0.93
DDX11-219ENST00000542242 SCAF11Q99590 1463 aaKnown RBP20.85■□□□□ 0.93
DDX11-219ENST00000542242 KIF1BO60333 1816 aa20.85■□□□□ 0.93
DDX11-219ENST00000542242 LTKP29376 864 aa20.84■□□□□ 0.93
DDX11-219ENST00000542242 NPHP4O75161 1426 aaPredicted RBP20.82■□□□□ 0.92
DDX11-219ENST00000542242 ANKLE2Q86XL3 938 aa20.82■□□□□ 0.92
DDX11-219ENST00000542242 CCDC144AA2RUR9 1427 aa20.81■□□□□ 0.92
DDX11-219ENST00000542242 STRCP1A6NGW2 1772 aa20.81■□□□□ 0.92
DDX11-219ENST00000542242 DIEXFQ68CQ4 756 aaKnown RBP20.8■□□□□ 0.92
DDX11-219ENST00000542242 NEXMIFQ5QGS0 1516 aa20.76■□□□□ 0.91
DDX11-219ENST00000542242 RIMS2Q9UQ26 1411 aa20.76■□□□□ 0.91
DDX11-219ENST00000542242 TXNDC2Q86VQ3 553 aa20.75■□□□□ 0.91
DDX11-219ENST00000542242 IFT172Q9UG01 1749 aa20.75■□□□□ 0.91
DDX11-219ENST00000542242 PPLO60437 1756 aa20.74■□□□□ 0.91
DDX11-219ENST00000542242 NRXN3Q9Y4C0 1643 aa20.74■□□□□ 0.91
DDX11-219ENST00000542242 IQSEC2Q5JU85 1478 aa20.73■□□□□ 0.91
DDX11-219ENST00000542242 NBPF8Q3BBV2 869 aa20.72■□□□□ 0.91
DDX11-219ENST00000542242 ZNF335Q9H4Z2 1342 aaPredicted RBP20.72■□□□□ 0.91
DDX11-219ENST00000542242 SPATA31E1Q6ZUB1 1445 aa20.71■□□□□ 0.91
DDX11-219ENST00000542242 STAG3Q9UJ98 1225 aa20.71■□□□□ 0.91
DDX11-219ENST00000542242 PLEKHG1Q9ULL1 1385 aa20.71■□□□□ 0.91
DDX11-219ENST00000542242 CHD2O14647 1828 aaKnown RBP20.69■□□□□ 0.9
DDX11-219ENST00000542242 SETBP1Q9Y6X0 1596 aa20.68■□□□□ 0.9
DDX11-219ENST00000542242 SETD1AO15047 1707 aaKnown RBP20.68■□□□□ 0.9
DDX11-219ENST00000542242 EID1Q9Y6B2 187 aa20.68■□□□□ 0.9
DDX11-219ENST00000542242 XIRP1Q702N8 1843 aaKnown RBP20.68■□□□□ 0.9
DDX11-219ENST00000542242 ADAMTS13Q76LX8 1427 aa20.68■□□□□ 0.9
DDX11-219ENST00000542242 NWD1Q149M9 1564 aa20.67■□□□□ 0.9
DDX11-219ENST00000542242 UBAP1LF5GYI3 381 aa20.66■□□□□ 0.9
DDX11-219ENST00000542242 CPS1P31327 1500 aa20.66■□□□□ 0.9
DDX11-219ENST00000542242 DIP2AQ14689 1571 aa20.66■□□□□ 0.9
DDX11-219ENST00000542242 ZNF326Q5BKZ1 582 aaKnown RBP20.65■□□□□ 0.9
DDX11-219ENST00000542242 CHGAP10645 457 aaKnown RBP20.64■□□□□ 0.89
DDX11-219ENST00000542242 DCAF11Q8TEB1 546 aa20.64■□□□□ 0.89
DDX11-219ENST00000542242 RGL3Q3MIN7 710 aa20.63■□□□□ 0.89
DDX11-219ENST00000542242 KDM2AQ9Y2K7 1162 aa20.63■□□□□ 0.89
DDX11-219ENST00000542242 EIF4G2P78344 907 aaKnown RBP eCLIP20.62■□□□□ 0.89
DDX11-219ENST00000542242 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.62■□□□□ 0.89
DDX11-219ENST00000542242 RALGAPBQ86X10 1494 aa20.62■□□□□ 0.89
DDX11-219ENST00000542242 HSPA5P11021 654 aaKnown RBP20.61■□□□□ 0.89
DDX11-219ENST00000542242 KCNA4P22459 653 aa20.61■□□□□ 0.89
DDX11-219ENST00000542242 HIRIP3Q9BW71 556 aaPredicted RBP20.61■□□□□ 0.89
DDX11-219ENST00000542242 LRRC7Q96NW7 1537 aa20.59■□□□□ 0.89
DDX11-219ENST00000542242 RPGRIP1LQ68CZ1 1315 aa20.58■□□□□ 0.89
DDX11-219ENST00000542242 HDGFP51858 240 aaKnown RBP20.58■□□□□ 0.89
DDX11-219ENST00000542242 NUTM2DQ5VT03 806 aaPredicted RBP20.58■□□□□ 0.89
DDX11-219ENST00000542242 ALKQ9UM73 1620 aa20.57■□□□□ 0.88
DDX11-219ENST00000542242 PRAG1Q86YV5 1406 aa20.57■□□□□ 0.88
DDX11-219ENST00000542242 XRN1Q8IZH2 1706 aaKnown RBP20.57■□□□□ 0.88
DDX11-219ENST00000542242 SLC26A8Q96RN1 970 aa20.57■□□□□ 0.88
DDX11-219ENST00000542242 TBX22Q9Y458 520 aa20.57■□□□□ 0.88
DDX11-219ENST00000542242 TRPM1Q7Z4N2 1603 aa20.56■□□□□ 0.88
DDX11-219ENST00000542242 NRXN1Q9ULB1 1477 aa20.55■□□□□ 0.88
DDX11-219ENST00000542242 PIK3R4Q99570 1358 aa20.54■□□□□ 0.88
DDX11-219ENST00000542242 NKTRP30414 1462 aaKnown RBP20.54■□□□□ 0.88
DDX11-219ENST00000542242 PTPRUQ92729 1446 aa20.53■□□□□ 0.88
DDX11-219ENST00000542242 KCNA6P17658 529 aa20.52■□□□□ 0.88
DDX11-219ENST00000542242 SCAF1Q9H7N4 1312 aaKnown RBP20.52■□□□□ 0.87
DDX11-219ENST00000542242 MYOM2P54296 1465 aa20.51■□□□□ 0.87
DDX11-219ENST00000542242 STAC3Q96MF2 364 aa20.51■□□□□ 0.87
DDX11-219ENST00000542242 USP47Q96K76 1375 aa20.5■□□□□ 0.87
DDX11-219ENST00000542242 TOM1O60784 492 aa20.5■□□□□ 0.87
DDX11-219ENST00000542242 CARD11Q9BXL7 1154 aa20.49■□□□□ 0.87
DDX11-219ENST00000542242 PIK3C2GO75747 1445 aa20.49■□□□□ 0.87
DDX11-219ENST00000542242 ADGRF5Q8IZF2 1346 aa20.49■□□□□ 0.87
DDX11-219ENST00000542242 LAMC1P11047 1609 aa20.49■□□□□ 0.87
DDX11-219ENST00000542242 ASXL1Q8IXJ9 1541 aa20.48■□□□□ 0.87
DDX11-219ENST00000542242 ROCK2O75116 1388 aaKnown RBP20.48■□□□□ 0.87
DDX11-219ENST00000542242 METP08581 1390 aa20.48■□□□□ 0.87
DDX11-219ENST00000542242 VGFO15240 615 aaPredicted RBP20.48■□□□□ 0.87
DDX11-219ENST00000542242 DDX10Q13206 875 aaKnown RBP20.47■□□□□ 0.87
DDX11-219ENST00000542242 MIER1Q8N108 512 aa20.46■□□□□ 0.87
DDX11-219ENST00000542242 GPRASP1Q5JY77 1395 aa20.44■□□□□ 0.86
DDX11-219ENST00000542242 KNDC1Q76NI1 1749 aa20.43■□□□□ 0.86
DDX11-219ENST00000542242 KIAA1210Q9ULL0 1709 aa20.42■□□□□ 0.86
DDX11-219ENST00000542242 PIP4K2BP78356 416 aa20.42■□□□□ 0.86
DDX11-219ENST00000542242 TMEM94Q12767 1356 aa20.42■□□□□ 0.86
DDX11-219ENST00000542242 BCANQ96GW7 911 aa20.41■□□□□ 0.86
DDX11-219ENST00000542242 NBPF1Q3BBV0 1214 aa20.4■□□□□ 0.86
DDX11-219ENST00000542242 WASHC2AQ641Q2 1341 aa20.4■□□□□ 0.86
DDX11-219ENST00000542242 CCDC7Q96M83 1385 aa20.4■□□□□ 0.86
DDX11-219ENST00000542242 NCOA3Q9Y6Q9 1424 aa20.4■□□□□ 0.86
DDX11-219ENST00000542242 HSPA1LP34931 641 aa20.39■□□□□ 0.85
DDX11-219ENST00000542242 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.39■□□□□ 0.85
DDX11-219ENST00000542242 PTCH1Q13635 1447 aa20.38■□□□□ 0.85
DDX11-219ENST00000542242 AMOTL2Q9Y2J4 779 aa20.38■□□□□ 0.85
DDX11-219ENST00000542242 NALCNQ8IZF0 1738 aa20.38■□□□□ 0.85
DDX11-219ENST00000542242 ADGRB1O14514 1584 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms