RNA–Protein interactions for RNA: ENST00000541616.1

CACNA2D4-214, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 4

Gene CACNA2D4, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-214ENST00000541616 STRCP1A6NGW2 1772 aa25.72■■□□□ 1.71
CACNA2D4-214ENST00000541616 SPHKAPQ2M3C7 1700 aa25.72■■□□□ 1.71
CACNA2D4-214ENST00000541616 SLC26A8Q96RN1 970 aa25.72■■□□□ 1.71
CACNA2D4-214ENST00000541616 ZFYVE9O95405 1425 aa25.71■■□□□ 1.71
CACNA2D4-214ENST00000541616 LRRC7Q96NW7 1537 aa25.69■■□□□ 1.7
CACNA2D4-214ENST00000541616 PLEKHG1Q9ULL1 1385 aa25.69■■□□□ 1.7
CACNA2D4-214ENST00000541616 SCAF1Q9H7N4 1312 aaKnown RBP25.68■■□□□ 1.7
CACNA2D4-214ENST00000541616 SLC4A1APQ9BWU0 796 aaKnown RBP25.67■■□□□ 1.7
CACNA2D4-214ENST00000541616 KCNA6P17658 529 aa25.66■■□□□ 1.7
CACNA2D4-214ENST00000541616 PIP4K2BP78356 416 aa25.65■■□□□ 1.7
CACNA2D4-214ENST00000541616 SENP3Q9H4L4 574 aaPredicted RBP25.65■■□□□ 1.7
CACNA2D4-214ENST00000541616 ZNF326Q5BKZ1 582 aaKnown RBP25.63■■□□□ 1.69
CACNA2D4-214ENST00000541616 NUTM2DQ5VT03 806 aaPredicted RBP25.63■■□□□ 1.69
CACNA2D4-214ENST00000541616 TRPM2O94759 1503 aa25.62■■□□□ 1.69
CACNA2D4-214ENST00000541616 TBX22Q9Y458 520 aa25.6■■□□□ 1.69
CACNA2D4-214ENST00000541616 ACIN1Q9UKV3 1341 aaKnown RBP25.6■■□□□ 1.69
CACNA2D4-214ENST00000541616 PROSER2Q86WR7 435 aaPredicted RBP25.59■■□□□ 1.69
CACNA2D4-214ENST00000541616 CLTCL1P53675 1640 aa25.58■■□□□ 1.69
CACNA2D4-214ENST00000541616 KIF1BO60333 1816 aa25.56■■□□□ 1.68
CACNA2D4-214ENST00000541616 NKTRP30414 1462 aaKnown RBP25.55■■□□□ 1.68
CACNA2D4-214ENST00000541616 TMEM94Q12767 1356 aa25.55■■□□□ 1.68
CACNA2D4-214ENST00000541616 DIP2AQ14689 1571 aa25.54■■□□□ 1.68
CACNA2D4-214ENST00000541616 NWD1Q149M9 1564 aa25.54■■□□□ 1.68
CACNA2D4-214ENST00000541616 XIRP1Q702N8 1843 aaKnown RBP25.53■■□□□ 1.68
CACNA2D4-214ENST00000541616 SETD5Q9C0A6 1442 aa25.53■■□□□ 1.68
CACNA2D4-214ENST00000541616 CHD2O14647 1828 aaKnown RBP25.52■■□□□ 1.68
CACNA2D4-214ENST00000541616 ADAMTS13Q76LX8 1427 aa25.52■■□□□ 1.68
CACNA2D4-214ENST00000541616 MPHOSPH9Q99550 1183 aa25.51■■□□□ 1.67
CACNA2D4-214ENST00000541616 PIK3R4Q99570 1358 aa25.51■■□□□ 1.67
CACNA2D4-214ENST00000541616 ALKQ9UM73 1620 aa25.5■■□□□ 1.67
CACNA2D4-214ENST00000541616 HSPA1LP34931 641 aa25.49■■□□□ 1.67
CACNA2D4-214ENST00000541616 FOXD1Q16676 465 aa25.48■■□□□ 1.67
CACNA2D4-214ENST00000541616 RBM33Q96EV2 1170 aaKnown RBP25.47■■□□□ 1.67
CACNA2D4-214ENST00000541616 NEXMIFQ5QGS0 1516 aa25.45■■□□□ 1.66
CACNA2D4-214ENST00000541616 MSH6P52701 1360 aa25.44■■□□□ 1.66
CACNA2D4-214ENST00000541616 SETBP1Q9Y6X0 1596 aa25.44■■□□□ 1.66
CACNA2D4-214ENST00000541616 RPGRIP1LQ68CZ1 1315 aa25.44■■□□□ 1.66
CACNA2D4-214ENST00000541616 VGFO15240 615 aaPredicted RBP25.44■■□□□ 1.66
CACNA2D4-214ENST00000541616 CCDC144AA2RUR9 1427 aa25.43■■□□□ 1.66
CACNA2D4-214ENST00000541616 DISP3Q9P2K9 1392 aa25.43■■□□□ 1.66
CACNA2D4-214ENST00000541616 C14orf37Q86TY3 774 aa25.42■■□□□ 1.66
CACNA2D4-214ENST00000541616 AMOTL2Q9Y2J4 779 aa25.42■■□□□ 1.66
CACNA2D4-214ENST00000541616 RAB3GAP2Q9H2M9 1393 aa25.42■■□□□ 1.66
CACNA2D4-214ENST00000541616 NCOA3Q9Y6Q9 1424 aa25.4■■□□□ 1.66
CACNA2D4-214ENST00000541616 NRXN3Q9Y4C0 1643 aa25.4■■□□□ 1.66
CACNA2D4-214ENST00000541616 FAM135BQ49AJ0 1406 aa25.37■■□□□ 1.65
CACNA2D4-214ENST00000541616 PTPRUQ92729 1446 aa25.36■■□□□ 1.65
CACNA2D4-214ENST00000541616 METP08581 1390 aa25.34■■□□□ 1.65
CACNA2D4-214ENST00000541616 RGL3Q3MIN7 710 aa25.33■■□□□ 1.65
CACNA2D4-214ENST00000541616 C19orf44Q9H6X5 657 aa25.33■■□□□ 1.65
CACNA2D4-214ENST00000541616 SLAIN2Q9P270 581 aa25.33■■□□□ 1.65
CACNA2D4-214ENST00000541616 PPLO60437 1756 aa25.33■■□□□ 1.65
CACNA2D4-214ENST00000541616 ATF3P18847 181 aa25.31■■□□□ 1.64
CACNA2D4-214ENST00000541616 XRN1Q8IZH2 1706 aaKnown RBP25.31■■□□□ 1.64
CACNA2D4-214ENST00000541616 HRCP23327 699 aa25.3■■□□□ 1.64
CACNA2D4-214ENST00000541616 CADPS2Q86UW7 1296 aa25.3■■□□□ 1.64
CACNA2D4-214ENST00000541616 SPATA31E1Q6ZUB1 1445 aa25.29■■□□□ 1.64
CACNA2D4-214ENST00000541616 ROBO1Q9Y6N7 1651 aa25.28■■□□□ 1.64
CACNA2D4-214ENST00000541616 ANKRD30BQ9BXX2 1392 aa25.28■■□□□ 1.64
CACNA2D4-214ENST00000541616 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.26■■□□□ 1.63
CACNA2D4-214ENST00000541616 ADGRF5Q8IZF2 1346 aa25.22■■□□□ 1.63
CACNA2D4-214ENST00000541616 DCCP43146 1447 aa25.21■■□□□ 1.63
CACNA2D4-214ENST00000541616 SETD1AO15047 1707 aaKnown RBP25.21■■□□□ 1.63
CACNA2D4-214ENST00000541616 MED1Q15648 1581 aaPredicted RBP25.21■■□□□ 1.63
CACNA2D4-214ENST00000541616 IFT172Q9UG01 1749 aa25.19■■□□□ 1.62
CACNA2D4-214ENST00000541616 PTCH1Q13635 1447 aa25.18■■□□□ 1.62
CACNA2D4-214ENST00000541616 ADGRL3Q9HAR2 1447 aa25.17■■□□□ 1.62
CACNA2D4-214ENST00000541616 PHF23Q9BUL5 403 aaPredicted RBP25.15■■□□□ 1.62
CACNA2D4-214ENST00000541616 PHLPP1O60346 1717 aa25.15■■□□□ 1.62
CACNA2D4-214ENST00000541616 ILDR2Q71H61 639 aa25.13■■□□□ 1.61
CACNA2D4-214ENST00000541616 ROBO2Q9HCK4 1378 aa25.13■■□□□ 1.61
CACNA2D4-214ENST00000541616 PIK3C2GO75747 1445 aa25.12■■□□□ 1.61
CACNA2D4-214ENST00000541616 PRAG1Q86YV5 1406 aa25.12■■□□□ 1.61
CACNA2D4-214ENST00000541616 NALCNQ8IZF0 1738 aa25.1■■□□□ 1.61
CACNA2D4-214ENST00000541616 BRINP3Q76B58 766 aa25.09■■□□□ 1.61
CACNA2D4-214ENST00000541616 STK26Q9P289 416 aa25.09■■□□□ 1.61
CACNA2D4-214ENST00000541616 MST1RQ04912 1400 aa25.09■■□□□ 1.61
CACNA2D4-214ENST00000541616 MYOM2P54296 1465 aa25.09■■□□□ 1.61
CACNA2D4-214ENST00000541616 LRPPRCP42704 1394 aaKnown RBP25.07■■□□□ 1.6
CACNA2D4-214ENST00000541616 JCADQ9P266 1359 aa25.07■■□□□ 1.6
CACNA2D4-214ENST00000541616 TMEM132EQ6IEE7 984 aa25.07■■□□□ 1.6
CACNA2D4-214ENST00000541616 AHDC1Q5TGY3 1603 aaPredicted RBP25.06■■□□□ 1.6
CACNA2D4-214ENST00000541616 C14orf93Q9H972 538 aaKnown RBP25.06■■□□□ 1.6
CACNA2D4-214ENST00000541616 NRXN1Q9ULB1 1477 aa25.05■■□□□ 1.6
CACNA2D4-214ENST00000541616 ABCC11Q96J66 1382 aa25.05■■□□□ 1.6
CACNA2D4-214ENST00000541616 COL16A1Q07092 1604 aaPredicted RBP25.04■■□□□ 1.6
CACNA2D4-214ENST00000541616 TECPR2O15040 1411 aa25.03■■□□□ 1.6
CACNA2D4-214ENST00000541616 ASXL1Q8IXJ9 1541 aa25.03■■□□□ 1.6
CACNA2D4-214ENST00000541616 STAC3Q96MF2 364 aa25.03■■□□□ 1.6
CACNA2D4-214ENST00000541616 LAMC1P11047 1609 aa25.03■■□□□ 1.6
CACNA2D4-214ENST00000541616 DHX57Q6P158 1386 aaKnown RBP25.03■■□□□ 1.6
CACNA2D4-214ENST00000541616 CFAP70Q5T0N1 1121 aa25.02■■□□□ 1.6
CACNA2D4-214ENST00000541616 DCAF11Q8TEB1 546 aa25.02■■□□□ 1.6
CACNA2D4-214ENST00000541616 YTHDC2Q9H6S0 1430 aaKnown RBP25.02■■□□□ 1.6
CACNA2D4-214ENST00000541616 KDM2AQ9Y2K7 1162 aa25.01■■□□□ 1.59
CACNA2D4-214ENST00000541616 C1orf167Q5SNV9 1468 aa25■■□□□ 1.59
CACNA2D4-214ENST00000541616 KNDC1Q76NI1 1749 aa25■■□□□ 1.59
CACNA2D4-214ENST00000541616 WAPLQ7Z5K2 1190 aa24.99■■□□□ 1.59
CACNA2D4-214ENST00000541616 SIRT1Q96EB6 747 aa24.97■■□□□ 1.59
CACNA2D4-214ENST00000541616 SPATA31A6Q5VVP1 1343 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms