RNA–Protein interactions for RNA: ENST00000541614.5

LRTOMT-218, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-218ENST00000541614 STRCP1A6NGW2 1772 aa9.4□□□□□ -0.91
LRTOMT-218ENST00000541614 SETD5Q9C0A6 1442 aa9.39□□□□□ -0.91
LRTOMT-218ENST00000541614 ACIN1Q9UKV3 1341 aaKnown RBP9.39□□□□□ -0.91
LRTOMT-218ENST00000541614 KIF1BO60333 1816 aa9.39□□□□□ -0.91
LRTOMT-218ENST00000541614 RIMS2Q9UQ26 1411 aa9.39□□□□□ -0.91
LRTOMT-218ENST00000541614 SLC4A1APQ9BWU0 796 aaKnown RBP9.38□□□□□ -0.91
LRTOMT-218ENST00000541614 PLEKHG1Q9ULL1 1385 aa9.37□□□□□ -0.91
LRTOMT-218ENST00000541614 CHGAP10645 457 aaKnown RBP9.36□□□□□ -0.91
LRTOMT-218ENST00000541614 HDGFP51858 240 aaKnown RBP9.36□□□□□ -0.91
LRTOMT-218ENST00000541614 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.36□□□□□ -0.91
LRTOMT-218ENST00000541614 DIP2AQ14689 1571 aa9.36□□□□□ -0.91
LRTOMT-218ENST00000541614 NWD1Q149M9 1564 aa9.36□□□□□ -0.91
LRTOMT-218ENST00000541614 RAB3GAP2Q9H2M9 1393 aa9.36□□□□□ -0.91
LRTOMT-218ENST00000541614 NEXMIFQ5QGS0 1516 aa9.35□□□□□ -0.91
LRTOMT-218ENST00000541614 LRRC7Q96NW7 1537 aa9.35□□□□□ -0.91
LRTOMT-218ENST00000541614 CHD2O14647 1828 aaKnown RBP9.34□□□□□ -0.91
LRTOMT-218ENST00000541614 PPP1R15AO75807 674 aaPredicted RBP9.34□□□□□ -0.91
LRTOMT-218ENST00000541614 MPHOSPH9Q99550 1183 aa9.34□□□□□ -0.91
LRTOMT-218ENST00000541614 SETBP1Q9Y6X0 1596 aa9.33□□□□□ -0.92
LRTOMT-218ENST00000541614 XIRP1Q702N8 1843 aaKnown RBP9.33□□□□□ -0.92
LRTOMT-218ENST00000541614 ADAMTS13Q76LX8 1427 aa9.33□□□□□ -0.92
LRTOMT-218ENST00000541614 SLC26A8Q96RN1 970 aa9.33□□□□□ -0.92
LRTOMT-218ENST00000541614 NRXN3Q9Y4C0 1643 aa9.33□□□□□ -0.92
LRTOMT-218ENST00000541614 NKTRP30414 1462 aaKnown RBP9.33□□□□□ -0.92
LRTOMT-218ENST00000541614 PPLO60437 1756 aa9.32□□□□□ -0.92
LRTOMT-218ENST00000541614 CCDC144AA2RUR9 1427 aa9.31□□□□□ -0.92
LRTOMT-218ENST00000541614 KCNA6P17658 529 aa9.31□□□□□ -0.92
LRTOMT-218ENST00000541614 HRCP23327 699 aa9.31□□□□□ -0.92
LRTOMT-218ENST00000541614 ZNF326Q5BKZ1 582 aaKnown RBP9.31□□□□□ -0.92
LRTOMT-218ENST00000541614 BCANQ96GW7 911 aa9.31□□□□□ -0.92
LRTOMT-218ENST00000541614 TBX22Q9Y458 520 aa9.31□□□□□ -0.92
LRTOMT-218ENST00000541614 PIK3R4Q99570 1358 aa9.31□□□□□ -0.92
LRTOMT-218ENST00000541614 IFT172Q9UG01 1749 aa9.31□□□□□ -0.92
LRTOMT-218ENST00000541614 ALKQ9UM73 1620 aa9.31□□□□□ -0.92
LRTOMT-218ENST00000541614 UBAP1LF5GYI3 381 aa9.3□□□□□ -0.92
LRTOMT-218ENST00000541614 NUTM2DQ5VT03 806 aaPredicted RBP9.3□□□□□ -0.92
LRTOMT-218ENST00000541614 SPATA31E1Q6ZUB1 1445 aa9.3□□□□□ -0.92
LRTOMT-218ENST00000541614 SETD1AO15047 1707 aaKnown RBP9.29□□□□□ -0.92
LRTOMT-218ENST00000541614 RPGRIP1LQ68CZ1 1315 aa9.29□□□□□ -0.92
LRTOMT-218ENST00000541614 XRN1Q8IZH2 1706 aaKnown RBP9.28□□□□□ -0.92
LRTOMT-218ENST00000541614 TOM1O60784 492 aa9.28□□□□□ -0.92
LRTOMT-218ENST00000541614 TMEM94Q12767 1356 aa9.27□□□□□ -0.93
LRTOMT-218ENST00000541614 PTPRUQ92729 1446 aa9.26□□□□□ -0.93
LRTOMT-218ENST00000541614 VGFO15240 615 aaPredicted RBP9.26□□□□□ -0.93
LRTOMT-218ENST00000541614 NCOA3Q9Y6Q9 1424 aa9.25□□□□□ -0.93
LRTOMT-218ENST00000541614 MSH5O43196 834 aa9.25□□□□□ -0.93
LRTOMT-218ENST00000541614 PROSER2Q86WR7 435 aaPredicted RBP9.25□□□□□ -0.93
LRTOMT-218ENST00000541614 ANKRD30BQ9BXX2 1392 aa9.24□□□□□ -0.93
LRTOMT-218ENST00000541614 METP08581 1390 aa9.24□□□□□ -0.93
LRTOMT-218ENST00000541614 PRAG1Q86YV5 1406 aa9.23□□□□□ -0.93
LRTOMT-218ENST00000541614 MYOM2P54296 1465 aa9.23□□□□□ -0.93
LRTOMT-218ENST00000541614 AMOTL2Q9Y2J4 779 aa9.23□□□□□ -0.93
LRTOMT-218ENST00000541614 MSH6P52701 1360 aa9.23□□□□□ -0.93
LRTOMT-218ENST00000541614 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.22□□□□□ -0.93
LRTOMT-218ENST00000541614 PIP4K2BP78356 416 aa9.22□□□□□ -0.93
LRTOMT-218ENST00000541614 RGL3Q3MIN7 710 aa9.22□□□□□ -0.93
LRTOMT-218ENST00000541614 RBM33Q96EV2 1170 aaKnown RBP9.22□□□□□ -0.93
LRTOMT-218ENST00000541614 LAMC1P11047 1609 aa9.22□□□□□ -0.93
LRTOMT-218ENST00000541614 SCAF1Q9H7N4 1312 aaKnown RBP9.22□□□□□ -0.93
LRTOMT-218ENST00000541614 PIK3C2GO75747 1445 aa9.22□□□□□ -0.93
LRTOMT-218ENST00000541614 PTCH1Q13635 1447 aa9.22□□□□□ -0.93
LRTOMT-218ENST00000541614 NRXN1Q9ULB1 1477 aa9.21□□□□□ -0.93
LRTOMT-218ENST00000541614 KNDC1Q76NI1 1749 aa9.21□□□□□ -0.94
LRTOMT-218ENST00000541614 NALCNQ8IZF0 1738 aa9.21□□□□□ -0.94
LRTOMT-218ENST00000541614 ADGRF5Q8IZF2 1346 aa9.21□□□□□ -0.94
LRTOMT-218ENST00000541614 ASXL1Q8IXJ9 1541 aa9.21□□□□□ -0.94
LRTOMT-218ENST00000541614 ROBO1Q9Y6N7 1651 aa9.2□□□□□ -0.94
LRTOMT-218ENST00000541614 DCCP43146 1447 aa9.2□□□□□ -0.94
LRTOMT-218ENST00000541614 FAM135BQ49AJ0 1406 aa9.2□□□□□ -0.94
LRTOMT-218ENST00000541614 HSPA1LP34931 641 aa9.19□□□□□ -0.94
LRTOMT-218ENST00000541614 ADGRL3Q9HAR2 1447 aa9.19□□□□□ -0.94
LRTOMT-218ENST00000541614 TECPR2O15040 1411 aa9.18□□□□□ -0.94
LRTOMT-218ENST00000541614 C14orf37Q86TY3 774 aa9.18□□□□□ -0.94
LRTOMT-218ENST00000541614 C19orf44Q9H6X5 657 aa9.18□□□□□ -0.94
LRTOMT-218ENST00000541614 ROBO2Q9HCK4 1378 aa9.17□□□□□ -0.94
LRTOMT-218ENST00000541614 CADPS2Q86UW7 1296 aa9.17□□□□□ -0.94
LRTOMT-218ENST00000541614 LRPPRCP42704 1394 aaKnown RBP9.16□□□□□ -0.94
LRTOMT-218ENST00000541614 ATF3P18847 181 aa9.16□□□□□ -0.94
LRTOMT-218ENST00000541614 TRIM26Q12899 539 aaPredicted RBP9.16□□□□□ -0.94
LRTOMT-218ENST00000541614 STAC3Q96MF2 364 aa9.16□□□□□ -0.94
LRTOMT-218ENST00000541614 C14orf93Q9H972 538 aaKnown RBP9.16□□□□□ -0.94
LRTOMT-218ENST00000541614 SLAIN2Q9P270 581 aa9.16□□□□□ -0.94
LRTOMT-218ENST00000541614 MST1RQ04912 1400 aa9.15□□□□□ -0.94
LRTOMT-218ENST00000541614 YTHDC2Q9H6S0 1430 aaKnown RBP9.15□□□□□ -0.94
LRTOMT-218ENST00000541614 DHX57Q6P158 1386 aaKnown RBP9.15□□□□□ -0.94
LRTOMT-218ENST00000541614 ABCC11Q96J66 1382 aa9.15□□□□□ -0.94
LRTOMT-218ENST00000541614 PHLPP1O60346 1717 aa9.15□□□□□ -0.94
LRTOMT-218ENST00000541614 AHDC1Q5TGY3 1603 aaPredicted RBP9.15□□□□□ -0.94
LRTOMT-218ENST00000541614 ADGRB1O14514 1584 aa9.15□□□□□ -0.95
LRTOMT-218ENST00000541614 CDC42BPGQ6DT37 1551 aa9.15□□□□□ -0.95
LRTOMT-218ENST00000541614 KIAA1210Q9ULL0 1709 aa9.14□□□□□ -0.95
LRTOMT-218ENST00000541614 COL16A1Q07092 1604 aaPredicted RBP9.13□□□□□ -0.95
LRTOMT-218ENST00000541614 NHSL1Q5SYE7 1610 aa9.13□□□□□ -0.95
LRTOMT-218ENST00000541614 MED1Q15648 1581 aaPredicted RBP9.13□□□□□ -0.95
LRTOMT-218ENST00000541614 CFAP70Q5T0N1 1121 aa9.13□□□□□ -0.95
LRTOMT-218ENST00000541614 TMEM132EQ6IEE7 984 aa9.13□□□□□ -0.95
LRTOMT-218ENST00000541614 DCAF11Q8TEB1 546 aa9.13□□□□□ -0.95
LRTOMT-218ENST00000541614 DLC1Q96QB1 1528 aa9.13□□□□□ -0.95
LRTOMT-218ENST00000541614 SIRT1Q96EB6 747 aa9.12□□□□□ -0.95
LRTOMT-218ENST00000541614 FMN2Q9NZ56 1722 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms