RNA–Protein interactions for RNA: ENST00000541167.5

RAP1B-223, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-223	ENST00000541167	RIMS2	Q9UQ26	1411 aa		29.77	■■■□□ 2.36
RAP1B-223	ENST00000541167	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	29.76	■■■□□ 2.36
RAP1B-223	ENST00000541167	ZFYVE9	O95405	1425 aa		29.76	■■■□□ 2.35
RAP1B-223	ENST00000541167	PPP1R15A	O75807	674 aa	Predicted RBP	29.7	■■■□□ 2.35
RAP1B-223	ENST00000541167	HRC	P23327	699 aa		29.7	■■■□□ 2.35
RAP1B-223	ENST00000541167	HDGF	P51858	240 aa	Known RBP	29.7	■■■□□ 2.35
RAP1B-223	ENST00000541167	DISP3	Q9P2K9	1392 aa		29.68	■■■□□ 2.34
RAP1B-223	ENST00000541167	ZNF326	Q5BKZ1	582 aa	Known RBP	29.67	■■■□□ 2.34
RAP1B-223	ENST00000541167	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	29.67	■■■□□ 2.34
RAP1B-223	ENST00000541167	CCDC144A	A2RUR9	1427 aa		29.66	■■■□□ 2.34
RAP1B-223	ENST00000541167	NUTM2D	Q5VT03	806 aa	Predicted RBP	29.65	■■■□□ 2.34
RAP1B-223	ENST00000541167	BCAN	Q96GW7	911 aa		29.65	■■■□□ 2.34
RAP1B-223	ENST00000541167	PLEKHG1	Q9ULL1	1385 aa		29.64	■■■□□ 2.34
RAP1B-223	ENST00000541167	STRCP1	A6NGW2	1772 aa		29.63	■■■□□ 2.33
RAP1B-223	ENST00000541167	SOCS7	O14512	581 aa		29.63	■■■□□ 2.33
RAP1B-223	ENST00000541167	SENP3	Q9H4L4	574 aa	Predicted RBP	29.63	■■■□□ 2.33
RAP1B-223	ENST00000541167	CPS1	P31327	1500 aa		29.62	■■■□□ 2.33
RAP1B-223	ENST00000541167	NEXMIF	Q5QGS0	1516 aa		29.61	■■■□□ 2.33
RAP1B-223	ENST00000541167	ILDR2	Q71H61	639 aa		29.59	■■■□□ 2.33
RAP1B-223	ENST00000541167	SLC26A8	Q96RN1	970 aa		29.59	■■■□□ 2.33
RAP1B-223	ENST00000541167	IQSEC2	Q5JU85	1478 aa		29.57	■■■□□ 2.32
RAP1B-223	ENST00000541167	TRIM26	Q12899	539 aa	Predicted RBP	29.57	■■■□□ 2.32
RAP1B-223	ENST00000541167	PPL	O60437	1756 aa		29.55	■■■□□ 2.32
RAP1B-223	ENST00000541167	DIP2A	Q14689	1571 aa		29.54	■■■□□ 2.32
RAP1B-223	ENST00000541167	NRXN3	Q9Y4C0	1643 aa		29.51	■■■□□ 2.31
RAP1B-223	ENST00000541167	ADAMTS13	Q76LX8	1427 aa		29.51	■■■□□ 2.31
RAP1B-223	ENST00000541167	SPATA31E1	Q6ZUB1	1445 aa		29.5	■■■□□ 2.31
RAP1B-223	ENST00000541167	SETBP1	Q9Y6X0	1596 aa		29.5	■■■□□ 2.31
RAP1B-223	ENST00000541167	ANKRD30B	Q9BXX2	1392 aa		29.49	■■■□□ 2.31
RAP1B-223	ENST00000541167	IFT172	Q9UG01	1749 aa		29.48	■■■□□ 2.31
RAP1B-223	ENST00000541167	RPGRIP1L	Q68CZ1	1315 aa		29.48	■■■□□ 2.31
RAP1B-223	ENST00000541167	NWD1	Q149M9	1564 aa		29.48	■■■□□ 2.31
RAP1B-223	ENST00000541167	CHD2	O14647	1828 aa	Known RBP	29.48	■■■□□ 2.31
RAP1B-223	ENST00000541167	TBX22	Q9Y458	520 aa		29.47	■■■□□ 2.31
RAP1B-223	ENST00000541167	LRRC7	Q96NW7	1537 aa		29.46	■■■□□ 2.31
RAP1B-223	ENST00000541167	RGL3	Q3MIN7	710 aa		29.46	■■■□□ 2.31
RAP1B-223	ENST00000541167	KCNA6	P17658	529 aa		29.45	■■■□□ 2.31
RAP1B-223	ENST00000541167	VGF	O15240	615 aa	Predicted RBP	29.43	■■■□□ 2.3
RAP1B-223	ENST00000541167	NKTR	P30414	1462 aa	Known RBP	29.42	■■■□□ 2.3
RAP1B-223	ENST00000541167	XIRP1	Q702N8	1843 aa	Known RBP	29.41	■■■□□ 2.3
RAP1B-223	ENST00000541167	PIK3R4	Q99570	1358 aa		29.39	■■■□□ 2.3
RAP1B-223	ENST00000541167	SETD1A	O15047	1707 aa	Known RBP	29.37	■■■□□ 2.29
RAP1B-223	ENST00000541167	UBAP1L	F5GYI3	381 aa		29.34	■■■□□ 2.29
RAP1B-223	ENST00000541167	ALK	Q9UM73	1620 aa		29.34	■■■□□ 2.29
RAP1B-223	ENST00000541167	PROSER2	Q86WR7	435 aa	Predicted RBP	29.33	■■■□□ 2.29
RAP1B-223	ENST00000541167	XRN1	Q8IZH2	1706 aa	Known RBP	29.32	■■■□□ 2.28
RAP1B-223	ENST00000541167	TMEM94	Q12767	1356 aa		29.32	■■■□□ 2.28
RAP1B-223	ENST00000541167	ADGRF5	Q8IZF2	1346 aa		29.32	■■■□□ 2.28
RAP1B-223	ENST00000541167	PTPRU	Q92729	1446 aa		29.31	■■■□□ 2.28
RAP1B-223	ENST00000541167	MET	P08581	1390 aa		29.31	■■■□□ 2.28
RAP1B-223	ENST00000541167	MYOM2	P54296	1465 aa		29.29	■■■□□ 2.28
RAP1B-223	ENST00000541167	RBM33	Q96EV2	1170 aa	Known RBP	29.28	■■■□□ 2.28
RAP1B-223	ENST00000541167	AMOTL2	Q9Y2J4	779 aa		29.28	■■■□□ 2.28
RAP1B-223	ENST00000541167	TOM1	O60784	492 aa		29.26	■■■□□ 2.27
RAP1B-223	ENST00000541167	PIK3C2G	O75747	1445 aa		29.26	■■■□□ 2.27
RAP1B-223	ENST00000541167	DHX57	Q6P158	1386 aa	Known RBP	29.25	■■■□□ 2.27
RAP1B-223	ENST00000541167	NRXN1	Q9ULB1	1477 aa		29.23	■■■□□ 2.27
RAP1B-223	ENST00000541167	LAMC1	P11047	1609 aa		29.21	■■■□□ 2.27
RAP1B-223	ENST00000541167	SCAF1	Q9H7N4	1312 aa	Known RBP	29.2	■■■□□ 2.26
RAP1B-223	ENST00000541167	MSH6	P52701	1360 aa		29.19	■■■□□ 2.26
RAP1B-223	ENST00000541167	PIP4K2B	P78356	416 aa		29.18	■■■□□ 2.26
RAP1B-223	ENST00000541167	DCAF11	Q8TEB1	546 aa		29.18	■■■□□ 2.26
RAP1B-223	ENST00000541167	NCOA3	Q9Y6Q9	1424 aa		29.18	■■■□□ 2.26
RAP1B-223	ENST00000541167	C14orf37	Q86TY3	774 aa		29.17	■■■□□ 2.26
RAP1B-223	ENST00000541167	KDM2A	Q9Y2K7	1162 aa		29.17	■■■□□ 2.26
RAP1B-223	ENST00000541167	ASXL1	Q8IXJ9	1541 aa		29.16	■■■□□ 2.26
RAP1B-223	ENST00000541167	PTCH1	Q13635	1447 aa		29.13	■■■□□ 2.25
RAP1B-223	ENST00000541167	PCGF6	Q9BYE7	350 aa		29.13	■■■□□ 2.25
RAP1B-223	ENST00000541167	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	29.13	■■■□□ 2.25
RAP1B-223	ENST00000541167	PRAG1	Q86YV5	1406 aa		29.11	■■■□□ 2.25
RAP1B-223	ENST00000541167	KNDC1	Q76NI1	1749 aa		29.11	■■■□□ 2.25
RAP1B-223	ENST00000541167	C14orf93	Q9H972	538 aa	Known RBP	29.11	■■■□□ 2.25
RAP1B-223	ENST00000541167	CFAP70	Q5T0N1	1121 aa		29.1	■■■□□ 2.25
RAP1B-223	ENST00000541167	STAC3	Q96MF2	364 aa		29.1	■■■□□ 2.25
RAP1B-223	ENST00000541167	SIN3A	Q96ST3	1273 aa		29.1	■■■□□ 2.25
RAP1B-223	ENST00000541167	NALCN	Q8IZF0	1738 aa		29.09	■■■□□ 2.25
RAP1B-223	ENST00000541167	TMEM132E	Q6IEE7	984 aa		29.09	■■■□□ 2.25
RAP1B-223	ENST00000541167	ROBO2	Q9HCK4	1378 aa		29.09	■■■□□ 2.25
RAP1B-223	ENST00000541167	LRPPRC	P42704	1394 aa	Known RBP	29.07	■■■□□ 2.24
RAP1B-223	ENST00000541167	STK26	Q9P289	416 aa		29.07	■■■□□ 2.24
RAP1B-223	ENST00000541167	NEUROD1	Q13562	356 aa		29.06	■■■□□ 2.24
RAP1B-223	ENST00000541167	C19orf44	Q9H6X5	657 aa		29.06	■■■□□ 2.24
RAP1B-223	ENST00000541167	YTHDC2	Q9H6S0	1430 aa	Known RBP	29.05	■■■□□ 2.24
RAP1B-223	ENST00000541167	TECPR2	O15040	1411 aa		29.04	■■■□□ 2.24
RAP1B-223	ENST00000541167	ADGRL3	Q9HAR2	1447 aa		29.04	■■■□□ 2.24
RAP1B-223	ENST00000541167	ROBO1	Q9Y6N7	1651 aa		29.02	■■■□□ 2.24
RAP1B-223	ENST00000541167	ATF3	P18847	181 aa		29.02	■■■□□ 2.24
RAP1B-223	ENST00000541167	DCC	P43146	1447 aa		29.02	■■■□□ 2.24
RAP1B-223	ENST00000541167	ABCC11	Q96J66	1382 aa		29.01	■■■□□ 2.24
RAP1B-223	ENST00000541167	CADPS2	Q86UW7	1296 aa		29.01	■■■□□ 2.23
RAP1B-223	ENST00000541167	ADGRB1	O14514	1584 aa		29.01	■■■□□ 2.23
RAP1B-223	ENST00000541167	KIAA1210	Q9ULL0	1709 aa		28.99	■■■□□ 2.23
RAP1B-223	ENST00000541167	FAM135B	Q49AJ0	1406 aa		28.97	■■■□□ 2.23
RAP1B-223	ENST00000541167	HSPA1L	P34931	641 aa		28.97	■■■□□ 2.23
RAP1B-223	ENST00000541167	L3MBTL2	Q969R5	705 aa		28.97	■■■□□ 2.23
RAP1B-223	ENST00000541167	SLAIN2	Q9P270	581 aa		28.97	■■■□□ 2.23
RAP1B-223	ENST00000541167	WAPL	Q7Z5K2	1190 aa		28.94	■■■□□ 2.22
RAP1B-223	ENST00000541167	PLEKHH1	Q9ULM0	1364 aa		28.92	■■■□□ 2.22
RAP1B-223	ENST00000541167	DLC1	Q96QB1	1528 aa		28.92	■■■□□ 2.22
RAP1B-223	ENST00000541167	MST1R	Q04912	1400 aa		28.91	■■■□□ 2.22

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms