RNA–Protein interactions for RNA: ENST00000540935.5

DDX11-217, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-217ENST00000540935 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.39■■□□□ 1.17
DDX11-217ENST00000540935 PLEKHG1Q9ULL1 1385 aa22.38■■□□□ 1.17
DDX11-217ENST00000540935 CHGAP10645 457 aaKnown RBP22.38■■□□□ 1.17
DDX11-217ENST00000540935 KCNA6P17658 529 aa22.38■■□□□ 1.17
DDX11-217ENST00000540935 BCANQ96GW7 911 aa22.38■■□□□ 1.17
DDX11-217ENST00000540935 SLC26A8Q96RN1 970 aa22.38■■□□□ 1.17
DDX11-217ENST00000540935 DISP3Q9P2K9 1392 aa22.37■■□□□ 1.17
DDX11-217ENST00000540935 HFM1A2PYH4 1435 aa22.35■■□□□ 1.17
DDX11-217ENST00000540935 ALKQ9UM73 1620 aa22.35■■□□□ 1.17
DDX11-217ENST00000540935 SPHKAPQ2M3C7 1700 aa22.34■■□□□ 1.17
DDX11-217ENST00000540935 NKTRP30414 1462 aaKnown RBP22.33■■□□□ 1.16
DDX11-217ENST00000540935 NWD1Q149M9 1564 aa22.33■■□□□ 1.16
DDX11-217ENST00000540935 HSPA1LP34931 641 aa22.32■■□□□ 1.16
DDX11-217ENST00000540935 XIRP1Q702N8 1843 aaKnown RBP22.31■■□□□ 1.16
DDX11-217ENST00000540935 TMEM94Q12767 1356 aa22.3■■□□□ 1.16
DDX11-217ENST00000540935 TBX22Q9Y458 520 aa22.3■■□□□ 1.16
DDX11-217ENST00000540935 PROSER2Q86WR7 435 aaPredicted RBP22.29■■□□□ 1.16
DDX11-217ENST00000540935 DIP2AQ14689 1571 aa22.28■■□□□ 1.16
DDX11-217ENST00000540935 CHD2O14647 1828 aaKnown RBP22.27■■□□□ 1.15
DDX11-217ENST00000540935 TRIM52Q96A61 297 aa22.26■■□□□ 1.15
DDX11-217ENST00000540935 TRPM2O94759 1503 aa22.26■■□□□ 1.15
DDX11-217ENST00000540935 PIK3R4Q99570 1358 aa22.25■■□□□ 1.15
DDX11-217ENST00000540935 ADAMTS13Q76LX8 1427 aa22.24■■□□□ 1.15
DDX11-217ENST00000540935 NUTM2DQ5VT03 806 aaPredicted RBP22.24■■□□□ 1.15
DDX11-217ENST00000540935 SENP3Q9H4L4 574 aaPredicted RBP22.23■■□□□ 1.15
DDX11-217ENST00000540935 ZNF326Q5BKZ1 582 aaKnown RBP22.22■■□□□ 1.15
DDX11-217ENST00000540935 SLC4A1APQ9BWU0 796 aaKnown RBP22.21■■□□□ 1.15
DDX11-217ENST00000540935 MSH6P52701 1360 aa22.21■■□□□ 1.15
DDX11-217ENST00000540935 CLTCL1P53675 1640 aa22.2■■□□□ 1.15
DDX11-217ENST00000540935 FAM135BQ49AJ0 1406 aa22.2■■□□□ 1.14
DDX11-217ENST00000540935 NCOA3Q9Y6Q9 1424 aa22.2■■□□□ 1.14
DDX11-217ENST00000540935 KIF1BO60333 1816 aa22.19■■□□□ 1.14
DDX11-217ENST00000540935 SETBP1Q9Y6X0 1596 aa22.17■■□□□ 1.14
DDX11-217ENST00000540935 ACIN1Q9UKV3 1341 aaKnown RBP22.17■■□□□ 1.14
DDX11-217ENST00000540935 RBM33Q96EV2 1170 aaKnown RBP22.17■■□□□ 1.14
DDX11-217ENST00000540935 MED1Q15648 1581 aaPredicted RBP22.14■■□□□ 1.13
DDX11-217ENST00000540935 ILDR2Q71H61 639 aa22.14■■□□□ 1.13
DDX11-217ENST00000540935 NEXMIFQ5QGS0 1516 aa22.14■■□□□ 1.13
DDX11-217ENST00000540935 NRXN3Q9Y4C0 1643 aa22.13■■□□□ 1.13
DDX11-217ENST00000540935 AMOTL2Q9Y2J4 779 aa22.12■■□□□ 1.13
DDX11-217ENST00000540935 C14orf37Q86TY3 774 aa22.11■■□□□ 1.13
DDX11-217ENST00000540935 SLAIN2Q9P270 581 aa22.11■■□□□ 1.13
DDX11-217ENST00000540935 ROBO1Q9Y6N7 1651 aa22.11■■□□□ 1.13
DDX11-217ENST00000540935 RPGRIP1LQ68CZ1 1315 aa22.1■■□□□ 1.13
DDX11-217ENST00000540935 VGFO15240 615 aaPredicted RBP22.09■■□□□ 1.13
DDX11-217ENST00000540935 C19orf44Q9H6X5 657 aa22.09■■□□□ 1.13
DDX11-217ENST00000540935 PTPRUQ92729 1446 aa22.08■■□□□ 1.13
DDX11-217ENST00000540935 CADPS2Q86UW7 1296 aa22.08■■□□□ 1.13
DDX11-217ENST00000540935 XRN1Q8IZH2 1706 aaKnown RBP22.07■■□□□ 1.12
DDX11-217ENST00000540935 MPHOSPH9Q99550 1183 aa22.06■■□□□ 1.12
DDX11-217ENST00000540935 METP08581 1390 aa22.05■■□□□ 1.12
DDX11-217ENST00000540935 ATF3P18847 181 aa22.05■■□□□ 1.12
DDX11-217ENST00000540935 CCDC144AA2RUR9 1427 aa22.05■■□□□ 1.12
DDX11-217ENST00000540935 SETD5Q9C0A6 1442 aa22.05■■□□□ 1.12
DDX11-217ENST00000540935 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.04■■□□□ 1.12
DDX11-217ENST00000540935 SOCS7O14512 581 aa22.03■■□□□ 1.12
DDX11-217ENST00000540935 PHF23Q9BUL5 403 aaPredicted RBP22.03■■□□□ 1.12
DDX11-217ENST00000540935 DCCP43146 1447 aa22.03■■□□□ 1.12
DDX11-217ENST00000540935 FOXD1Q16676 465 aa22.02■■□□□ 1.12
DDX11-217ENST00000540935 PPLO60437 1756 aa22■■□□□ 1.11
DDX11-217ENST00000540935 PHLPP1O60346 1717 aa21.97■■□□□ 1.11
DDX11-217ENST00000540935 SETD1AO15047 1707 aaKnown RBP21.96■■□□□ 1.11
DDX11-217ENST00000540935 ANKRD30BQ9BXX2 1392 aa21.95■■□□□ 1.1
DDX11-217ENST00000540935 PTCH1Q13635 1447 aa21.95■■□□□ 1.1
DDX11-217ENST00000540935 SPATA31E1Q6ZUB1 1445 aa21.95■■□□□ 1.1
DDX11-217ENST00000540935 RAB3GAP2Q9H2M9 1393 aa21.94■■□□□ 1.1
DDX11-217ENST00000540935 PRAG1Q86YV5 1406 aa21.94■■□□□ 1.1
DDX11-217ENST00000540935 ADGRL3Q9HAR2 1447 aa21.94■■□□□ 1.1
DDX11-217ENST00000540935 JCADQ9P266 1359 aa21.93■■□□□ 1.1
DDX11-217ENST00000540935 RGL3Q3MIN7 710 aa21.92■■□□□ 1.1
DDX11-217ENST00000540935 COL16A1Q07092 1604 aaPredicted RBP21.91■■□□□ 1.1
DDX11-217ENST00000540935 AHDC1Q5TGY3 1603 aaPredicted RBP21.91■■□□□ 1.1
DDX11-217ENST00000540935 MST1RQ04912 1400 aa21.89■■□□□ 1.1
DDX11-217ENST00000540935 IFT172Q9UG01 1749 aa21.89■■□□□ 1.1
DDX11-217ENST00000540935 BRINP3Q76B58 766 aa21.89■■□□□ 1.09
DDX11-217ENST00000540935 NALCNQ8IZF0 1738 aa21.89■■□□□ 1.09
DDX11-217ENST00000540935 ADGRF5Q8IZF2 1346 aa21.88■■□□□ 1.09
DDX11-217ENST00000540935 ROBO2Q9HCK4 1378 aa21.87■■□□□ 1.09
DDX11-217ENST00000540935 ASXL1Q8IXJ9 1541 aa21.86■■□□□ 1.09
DDX11-217ENST00000540935 HRCP23327 699 aa21.86■■□□□ 1.09
DDX11-217ENST00000540935 SPATA31A6Q5VVP1 1343 aa21.84■■□□□ 1.09
DDX11-217ENST00000540935 PIK3C2GO75747 1445 aa21.83■■□□□ 1.09
DDX11-217ENST00000540935 RGS17Q9UGC6 210 aaPredicted RBP21.83■■□□□ 1.09
DDX11-217ENST00000540935 SHPRHQ149N8 1683 aa21.82■■□□□ 1.08
DDX11-217ENST00000540935 TECPR2O15040 1411 aa21.8■■□□□ 1.08
DDX11-217ENST00000540935 NHSL1Q5SYE7 1610 aa21.8■■□□□ 1.08
DDX11-217ENST00000540935 C1orf167Q5SNV9 1468 aa21.8■■□□□ 1.08
DDX11-217ENST00000540935 MYOM2P54296 1465 aa21.79■■□□□ 1.08
DDX11-217ENST00000540935 LRPPRCP42704 1394 aaKnown RBP21.79■■□□□ 1.08
DDX11-217ENST00000540935 ABCC11Q96J66 1382 aa21.78■■□□□ 1.08
DDX11-217ENST00000540935 NRXN1Q9ULB1 1477 aa21.77■■□□□ 1.08
DDX11-217ENST00000540935 LRRC59Q96AG4 307 aaKnown RBP21.77■■□□□ 1.08
DDX11-217ENST00000540935 KNDC1Q76NI1 1749 aa21.76■■□□□ 1.07
DDX11-217ENST00000540935 LAMC1P11047 1609 aa21.76■■□□□ 1.07
DDX11-217ENST00000540935 CDC42BPGQ6DT37 1551 aa21.75■■□□□ 1.07
DDX11-217ENST00000540935 C14orf93Q9H972 538 aaKnown RBP21.75■■□□□ 1.07
DDX11-217ENST00000540935 STK26Q9P289 416 aa21.75■■□□□ 1.07
DDX11-217ENST00000540935 TMEM132EQ6IEE7 984 aa21.74■■□□□ 1.07
DDX11-217ENST00000540935 YTHDC2Q9H6S0 1430 aaKnown RBP21.73■■□□□ 1.07
DDX11-217ENST00000540935 MEX3CQ5U5Q3 659 aaKnown RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms