RNA–Protein interactions for RNA: ENST00000540781.5

RAP1B-222, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-222	ENST00000540781	PPP1R15A	O75807	674 aa	Predicted RBP	29.85	■■■□□ 2.37
RAP1B-222	ENST00000540781	SLC26A8	Q96RN1	970 aa		29.84	■■■□□ 2.37
RAP1B-222	ENST00000540781	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	29.82	■■■□□ 2.36
RAP1B-222	ENST00000540781	SLC4A1AP	Q9BWU0	796 aa	Known RBP	29.81	■■■□□ 2.36
RAP1B-222	ENST00000540781	SENP3	Q9H4L4	574 aa	Predicted RBP	29.81	■■■□□ 2.36
RAP1B-222	ENST00000540781	PLEKHG1	Q9ULL1	1385 aa		29.8	■■■□□ 2.36
RAP1B-222	ENST00000540781	LRRC7	Q96NW7	1537 aa		29.8	■■■□□ 2.36
RAP1B-222	ENST00000540781	NUTM2D	Q5VT03	806 aa	Predicted RBP	29.78	■■■□□ 2.36
RAP1B-222	ENST00000540781	TOM1	O60784	492 aa		29.76	■■■□□ 2.35
RAP1B-222	ENST00000540781	TRPM2	O94759	1503 aa		29.76	■■■□□ 2.35
RAP1B-222	ENST00000540781	KCNA6	P17658	529 aa		29.75	■■■□□ 2.35
RAP1B-222	ENST00000540781	ZNF326	Q5BKZ1	582 aa	Known RBP	29.73	■■■□□ 2.35
RAP1B-222	ENST00000540781	CLTCL1	P53675	1640 aa		29.73	■■■□□ 2.35
RAP1B-222	ENST00000540781	SETD5	Q9C0A6	1442 aa		29.7	■■■□□ 2.34
RAP1B-222	ENST00000540781	SCAF1	Q9H7N4	1312 aa	Known RBP	29.7	■■■□□ 2.34
RAP1B-222	ENST00000540781	PIP4K2B	P78356	416 aa		29.69	■■■□□ 2.34
RAP1B-222	ENST00000540781	TBX22	Q9Y458	520 aa		29.69	■■■□□ 2.34
RAP1B-222	ENST00000540781	PROSER2	Q86WR7	435 aa	Predicted RBP	29.66	■■■□□ 2.34
RAP1B-222	ENST00000540781	MPHOSPH9	Q99550	1183 aa		29.66	■■■□□ 2.34
RAP1B-222	ENST00000540781	ACIN1	Q9UKV3	1341 aa	Known RBP	29.66	■■■□□ 2.34
RAP1B-222	ENST00000540781	KIF1B	O60333	1816 aa		29.66	■■■□□ 2.34
RAP1B-222	ENST00000540781	FOXD1	Q16676	465 aa		29.65	■■■□□ 2.34
RAP1B-222	ENST00000540781	ADAMTS13	Q76LX8	1427 aa		29.64	■■■□□ 2.34
RAP1B-222	ENST00000540781	NWD1	Q149M9	1564 aa		29.64	■■■□□ 2.33
RAP1B-222	ENST00000540781	TMEM94	Q12767	1356 aa		29.63	■■■□□ 2.33
RAP1B-222	ENST00000540781	XIRP1	Q702N8	1843 aa	Known RBP	29.62	■■■□□ 2.33
RAP1B-222	ENST00000540781	NKTR	P30414	1462 aa	Known RBP	29.61	■■■□□ 2.33
RAP1B-222	ENST00000540781	ALK	Q9UM73	1620 aa		29.61	■■■□□ 2.33
RAP1B-222	ENST00000540781	DIP2A	Q14689	1571 aa		29.6	■■■□□ 2.33
RAP1B-222	ENST00000540781	CHD2	O14647	1828 aa	Known RBP	29.6	■■■□□ 2.33
RAP1B-222	ENST00000540781	RBM33	Q96EV2	1170 aa	Known RBP	29.58	■■■□□ 2.33
RAP1B-222	ENST00000540781	RAB3GAP2	Q9H2M9	1393 aa		29.58	■■■□□ 2.33
RAP1B-222	ENST00000540781	NEXMIF	Q5QGS0	1516 aa		29.57	■■■□□ 2.32
RAP1B-222	ENST00000540781	PIK3R4	Q99570	1358 aa		29.56	■■■□□ 2.32
RAP1B-222	ENST00000540781	SETBP1	Q9Y6X0	1596 aa		29.53	■■■□□ 2.32
RAP1B-222	ENST00000540781	HSPA1L	P34931	641 aa		29.53	■■■□□ 2.32
RAP1B-222	ENST00000540781	CCDC144A	A2RUR9	1427 aa		29.53	■■■□□ 2.32
RAP1B-222	ENST00000540781	NRXN3	Q9Y4C0	1643 aa		29.52	■■■□□ 2.32
RAP1B-222	ENST00000540781	RPGRIP1L	Q68CZ1	1315 aa		29.51	■■■□□ 2.32
RAP1B-222	ENST00000540781	VGF	O15240	615 aa	Predicted RBP	29.5	■■■□□ 2.31
RAP1B-222	ENST00000540781	AMOTL2	Q9Y2J4	779 aa		29.49	■■■□□ 2.31
RAP1B-222	ENST00000540781	PTPRU	Q92729	1446 aa		29.47	■■■□□ 2.31
RAP1B-222	ENST00000540781	MSH6	P52701	1360 aa		29.47	■■■□□ 2.31
RAP1B-222	ENST00000540781	MET	P08581	1390 aa		29.43	■■■□□ 2.3
RAP1B-222	ENST00000540781	RGL3	Q3MIN7	710 aa		29.43	■■■□□ 2.3
RAP1B-222	ENST00000540781	C14orf37	Q86TY3	774 aa		29.43	■■■□□ 2.3
RAP1B-222	ENST00000540781	NCOA3	Q9Y6Q9	1424 aa		29.43	■■■□□ 2.3
RAP1B-222	ENST00000540781	PPL	O60437	1756 aa		29.41	■■■□□ 2.3
RAP1B-222	ENST00000540781	HRC	P23327	699 aa		29.41	■■■□□ 2.3
RAP1B-222	ENST00000540781	SPATA31E1	Q6ZUB1	1445 aa		29.4	■■■□□ 2.3
RAP1B-222	ENST00000540781	FAM135B	Q49AJ0	1406 aa		29.38	■■■□□ 2.29
RAP1B-222	ENST00000540781	XRN1	Q8IZH2	1706 aa	Known RBP	29.38	■■■□□ 2.29
RAP1B-222	ENST00000540781	DISP3	Q9P2K9	1392 aa		29.37	■■■□□ 2.29
RAP1B-222	ENST00000540781	C19orf44	Q9H6X5	657 aa		29.34	■■■□□ 2.29
RAP1B-222	ENST00000540781	SLAIN2	Q9P270	581 aa		29.34	■■■□□ 2.29
RAP1B-222	ENST00000540781	ANKRD30B	Q9BXX2	1392 aa		29.32	■■■□□ 2.28
RAP1B-222	ENST00000540781	ADGRF5	Q8IZF2	1346 aa		29.32	■■■□□ 2.28
RAP1B-222	ENST00000540781	ATF3	P18847	181 aa		29.3	■■■□□ 2.28
RAP1B-222	ENST00000540781	SETD1A	O15047	1707 aa	Known RBP	29.3	■■■□□ 2.28
RAP1B-222	ENST00000540781	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	29.3	■■■□□ 2.28
RAP1B-222	ENST00000540781	ROBO1	Q9Y6N7	1651 aa		29.3	■■■□□ 2.28
RAP1B-222	ENST00000540781	CADPS2	Q86UW7	1296 aa		29.29	■■■□□ 2.28
RAP1B-222	ENST00000540781	IFT172	Q9UG01	1749 aa		29.28	■■■□□ 2.28
RAP1B-222	ENST00000540781	DCC	P43146	1447 aa		29.2	■■■□□ 2.27
RAP1B-222	ENST00000540781	PTCH1	Q13635	1447 aa		29.2	■■■□□ 2.27
RAP1B-222	ENST00000540781	ADGRL3	Q9HAR2	1447 aa		29.2	■■■□□ 2.26
RAP1B-222	ENST00000540781	ROBO2	Q9HCK4	1378 aa		29.19	■■■□□ 2.26
RAP1B-222	ENST00000540781	PIK3C2G	O75747	1445 aa		29.19	■■■□□ 2.26
RAP1B-222	ENST00000540781	MED1	Q15648	1581 aa	Predicted RBP	29.18	■■■□□ 2.26
RAP1B-222	ENST00000540781	PRAG1	Q86YV5	1406 aa		29.17	■■■□□ 2.26
RAP1B-222	ENST00000540781	MYOM2	P54296	1465 aa		29.15	■■■□□ 2.26
RAP1B-222	ENST00000540781	TMEM132E	Q6IEE7	984 aa		29.14	■■■□□ 2.26
RAP1B-222	ENST00000540781	STK26	Q9P289	416 aa		29.14	■■■□□ 2.26
RAP1B-222	ENST00000540781	NALCN	Q8IZF0	1738 aa		29.14	■■■□□ 2.25
RAP1B-222	ENST00000540781	PHLPP1	O60346	1717 aa		29.13	■■■□□ 2.25
RAP1B-222	ENST00000540781	NRXN1	Q9ULB1	1477 aa		29.12	■■■□□ 2.25
RAP1B-222	ENST00000540781	C14orf93	Q9H972	538 aa	Known RBP	29.12	■■■□□ 2.25
RAP1B-222	ENST00000540781	LRPPRC	P42704	1394 aa	Known RBP	29.12	■■■□□ 2.25
RAP1B-222	ENST00000540781	MST1R	Q04912	1400 aa		29.11	■■■□□ 2.25
RAP1B-222	ENST00000540781	BRINP3	Q76B58	766 aa		29.1	■■■□□ 2.25
RAP1B-222	ENST00000540781	ASXL1	Q8IXJ9	1541 aa		29.1	■■■□□ 2.25
RAP1B-222	ENST00000540781	CFAP70	Q5T0N1	1121 aa		29.09	■■■□□ 2.25
RAP1B-222	ENST00000540781	ILDR2	Q71H61	639 aa		29.09	■■■□□ 2.25
RAP1B-222	ENST00000540781	DCAF11	Q8TEB1	546 aa		29.07	■■■□□ 2.24
RAP1B-222	ENST00000540781	ABCC11	Q96J66	1382 aa		29.07	■■■□□ 2.24
RAP1B-222	ENST00000540781	KDM2A	Q9Y2K7	1162 aa		29.07	■■■□□ 2.24
RAP1B-222	ENST00000540781	TECPR2	O15040	1411 aa		29.06	■■■□□ 2.24
RAP1B-222	ENST00000540781	YTHDC2	Q9H6S0	1430 aa	Known RBP	29.05	■■■□□ 2.24
RAP1B-222	ENST00000540781	PHF23	Q9BUL5	403 aa	Predicted RBP	29.05	■■■□□ 2.24
RAP1B-222	ENST00000540781	LAMC1	P11047	1609 aa		29.05	■■■□□ 2.24
RAP1B-222	ENST00000540781	AHDC1	Q5TGY3	1603 aa	Predicted RBP	29.05	■■■□□ 2.24
RAP1B-222	ENST00000540781	WAPL	Q7Z5K2	1190 aa		29.04	■■■□□ 2.24
RAP1B-222	ENST00000540781	COL16A1	Q07092	1604 aa	Predicted RBP	29.03	■■■□□ 2.24
RAP1B-222	ENST00000540781	KNDC1	Q76NI1	1749 aa		29.03	■■■□□ 2.24
RAP1B-222	ENST00000540781	DHX57	Q6P158	1386 aa	Known RBP	29.02	■■■□□ 2.24
RAP1B-222	ENST00000540781	JCAD	Q9P266	1359 aa		29.02	■■■□□ 2.24
RAP1B-222	ENST00000540781	STAC3	Q96MF2	364 aa		29.02	■■■□□ 2.24
RAP1B-222	ENST00000540781	C1orf167	Q5SNV9	1468 aa		29.01	■■■□□ 2.23
RAP1B-222	ENST00000540781	PLEKHH1	Q9ULM0	1364 aa		28.99	■■■□□ 2.23
RAP1B-222	ENST00000540781	SIRT1	Q96EB6	747 aa		28.98	■■■□□ 2.23

Retrieved 100 of 20,778 RNA–protein pairs in 83 ms