RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 ZNF335Q9H4Z2 1342 aaPredicted RBP19.77■□□□□ 0.76
PRPF19-204ENST00000539960 POLR1AO95602 1720 aaPredicted RBP19.77■□□□□ 0.76
PRPF19-204ENST00000539960 CLTCL1P53675 1640 aa19.76■□□□□ 0.75
PRPF19-204ENST00000539960 CERKQ8TCT0 537 aa19.76■□□□□ 0.75
PRPF19-204ENST00000539960 BCANQ96GW7 911 aa19.76■□□□□ 0.75
PRPF19-204ENST00000539960 CCDC144AA2RUR9 1427 aa19.75■□□□□ 0.75
PRPF19-204ENST00000539960 SLC26A8Q96RN1 970 aa19.74■□□□□ 0.75
PRPF19-204ENST00000539960 PLEKHG1Q9ULL1 1385 aa19.73■□□□□ 0.75
PRPF19-204ENST00000539960 SENP3Q9H4L4 574 aaPredicted RBP19.73■□□□□ 0.75
PRPF19-204ENST00000539960 MYO5BQ9ULV0 1848 aa19.73■□□□□ 0.75
PRPF19-204ENST00000539960 RPGRIP1LQ68CZ1 1315 aa19.73■□□□□ 0.75
PRPF19-204ENST00000539960 ANKRD30BQ9BXX2 1392 aa19.72■□□□□ 0.75
PRPF19-204ENST00000539960 IQGAP1P46940 1657 aa19.72■□□□□ 0.75
PRPF19-204ENST00000539960 RGL3Q3MIN7 710 aa19.71■□□□□ 0.75
PRPF19-204ENST00000539960 LTBP4Q8N2S1 1624 aa19.7■□□□□ 0.74
PRPF19-204ENST00000539960 VGFO15240 615 aaPredicted RBP19.7■□□□□ 0.74
PRPF19-204ENST00000539960 TBX22Q9Y458 520 aa19.7■□□□□ 0.74
PRPF19-204ENST00000539960 KIF1BO60333 1816 aa19.67■□□□□ 0.74
PRPF19-204ENST00000539960 SPATA31E1Q6ZUB1 1445 aa19.67■□□□□ 0.74
PRPF19-204ENST00000539960 KCNA6P17658 529 aa19.65■□□□□ 0.74
PRPF19-204ENST00000539960 NEXMIFQ5QGS0 1516 aa19.63■□□□□ 0.73
PRPF19-204ENST00000539960 ADAMTS13Q76LX8 1427 aa19.63■□□□□ 0.73
PRPF19-204ENST00000539960 FBXO41Q8TF61 875 aa19.61■□□□□ 0.73
PRPF19-204ENST00000539960 CPS1P31327 1500 aa19.61■□□□□ 0.73
PRPF19-204ENST00000539960 PCGF6Q9BYE7 350 aa19.6■□□□□ 0.73
PRPF19-204ENST00000539960 ADGRF5Q8IZF2 1346 aa19.59■□□□□ 0.73
PRPF19-204ENST00000539960 PIK3R4Q99570 1358 aa19.57■□□□□ 0.72
PRPF19-204ENST00000539960 PROSER2Q86WR7 435 aaPredicted RBP19.57■□□□□ 0.72
PRPF19-204ENST00000539960 IQSEC2Q5JU85 1478 aa19.56■□□□□ 0.72
PRPF19-204ENST00000539960 SETBP1Q9Y6X0 1596 aa19.56■□□□□ 0.72
PRPF19-204ENST00000539960 DHX57Q6P158 1386 aaKnown RBP19.56■□□□□ 0.72
PRPF19-204ENST00000539960 ILDR1Q86SU0 546 aaPredicted RBP19.55■□□□□ 0.72
PRPF19-204ENST00000539960 AMOTL2Q9Y2J4 779 aa19.55■□□□□ 0.72
PRPF19-204ENST00000539960 LRRC7Q96NW7 1537 aa19.55■□□□□ 0.72
PRPF19-204ENST00000539960 METP08581 1390 aa19.55■□□□□ 0.72
PRPF19-204ENST00000539960 STAC3Q96MF2 364 aa19.54■□□□□ 0.72
PRPF19-204ENST00000539960 STRCP1A6NGW2 1772 aa19.54■□□□□ 0.72
PRPF19-204ENST00000539960 DIP2AQ14689 1571 aa19.53■□□□□ 0.72
PRPF19-204ENST00000539960 DCAF11Q8TEB1 546 aa19.53■□□□□ 0.72
PRPF19-204ENST00000539960 PPLO60437 1756 aa19.52■□□□□ 0.72
PRPF19-204ENST00000539960 KDM2AQ9Y2K7 1162 aa19.52■□□□□ 0.72
PRPF19-204ENST00000539960 NRXN3Q9Y4C0 1643 aa19.51■□□□□ 0.71
PRPF19-204ENST00000539960 UBAP1LF5GYI3 381 aa19.51■□□□□ 0.71
PRPF19-204ENST00000539960 RBM33Q96EV2 1170 aaKnown RBP19.51■□□□□ 0.71
PRPF19-204ENST00000539960 SIN3AQ96ST3 1273 aa19.51■□□□□ 0.71
PRPF19-204ENST00000539960 PTPRUQ92729 1446 aa19.51■□□□□ 0.71
PRPF19-204ENST00000539960 TMEM94Q12767 1356 aa19.5■□□□□ 0.71
PRPF19-204ENST00000539960 C14orf93Q9H972 538 aaKnown RBP19.49■□□□□ 0.71
PRPF19-204ENST00000539960 CHD2O14647 1828 aaKnown RBP19.48■□□□□ 0.71
PRPF19-204ENST00000539960 NKTRP30414 1462 aaKnown RBP19.48■□□□□ 0.71
PRPF19-204ENST00000539960 ALKQ9UM73 1620 aa19.48■□□□□ 0.71
PRPF19-204ENST00000539960 TOM1O60784 492 aa19.48■□□□□ 0.71
PRPF19-204ENST00000539960 NEUROD1Q13562 356 aa19.48■□□□□ 0.71
PRPF19-204ENST00000539960 NWD1Q149M9 1564 aa19.48■□□□□ 0.71
PRPF19-204ENST00000539960 PIK3C2GO75747 1445 aa19.46■□□□□ 0.71
PRPF19-204ENST00000539960 CFAP70Q5T0N1 1121 aa19.46■□□□□ 0.71
PRPF19-204ENST00000539960 MYOM2P54296 1465 aa19.46■□□□□ 0.71
PRPF19-204ENST00000539960 IFT172Q9UG01 1749 aa19.45■□□□□ 0.7
PRPF19-204ENST00000539960 NRXN1Q9ULB1 1477 aa19.45■□□□□ 0.7
PRPF19-204ENST00000539960 TMEM132EQ6IEE7 984 aa19.44■□□□□ 0.7
PRPF19-204ENST00000539960 NCOA3Q9Y6Q9 1424 aa19.43■□□□□ 0.7
PRPF19-204ENST00000539960 C14orf37Q86TY3 774 aa19.42■□□□□ 0.7
PRPF19-204ENST00000539960 L3MBTL2Q969R5 705 aa19.42■□□□□ 0.7
PRPF19-204ENST00000539960 C19orf44Q9H6X5 657 aa19.41■□□□□ 0.7
PRPF19-204ENST00000539960 STK26Q9P289 416 aa19.41■□□□□ 0.7
PRPF19-204ENST00000539960 PIP4K2BP78356 416 aa19.4■□□□□ 0.7
PRPF19-204ENST00000539960 MSH6P52701 1360 aa19.4■□□□□ 0.7
PRPF19-204ENST00000539960 SETD1AO15047 1707 aaKnown RBP19.38■□□□□ 0.69
PRPF19-204ENST00000539960 LRPPRCP42704 1394 aaKnown RBP19.38■□□□□ 0.69
PRPF19-204ENST00000539960 XRN1Q8IZH2 1706 aaKnown RBP19.38■□□□□ 0.69
PRPF19-204ENST00000539960 ABCC11Q96J66 1382 aa19.38■□□□□ 0.69
PRPF19-204ENST00000539960 ROBO2Q9HCK4 1378 aa19.38■□□□□ 0.69
PRPF19-204ENST00000539960 XIRP1Q702N8 1843 aaKnown RBP19.37■□□□□ 0.69
PRPF19-204ENST00000539960 SCAF1Q9H7N4 1312 aaKnown RBP19.37■□□□□ 0.69
PRPF19-204ENST00000539960 SIRT1Q96EB6 747 aa19.36■□□□□ 0.69
PRPF19-204ENST00000539960 PRAG1Q86YV5 1406 aa19.35■□□□□ 0.69
PRPF19-204ENST00000539960 ATF3P18847 181 aa19.35■□□□□ 0.69
PRPF19-204ENST00000539960 SLAIN2Q9P270 581 aa19.35■□□□□ 0.69
PRPF19-204ENST00000539960 PTCH1Q13635 1447 aa19.34■□□□□ 0.69
PRPF19-204ENST00000539960 YTHDC2Q9H6S0 1430 aaKnown RBP19.34■□□□□ 0.69
PRPF19-204ENST00000539960 CADPS2Q86UW7 1296 aa19.34■□□□□ 0.69
PRPF19-204ENST00000539960 WAPLQ7Z5K2 1190 aa19.33■□□□□ 0.68
PRPF19-204ENST00000539960 TECPR2O15040 1411 aa19.33■□□□□ 0.68
PRPF19-204ENST00000539960 ASXL1Q8IXJ9 1541 aa19.32■□□□□ 0.68
PRPF19-204ENST00000539960 CLSPNQ9HAW4 1339 aa19.3■□□□□ 0.68
PRPF19-204ENST00000539960 LAMC1P11047 1609 aa19.29■□□□□ 0.68
PRPF19-204ENST00000539960 NBPF1Q3BBV0 1214 aa19.29■□□□□ 0.68
PRPF19-204ENST00000539960 TRAK1Q9UPV9 953 aa19.29■□□□□ 0.68
PRPF19-204ENST00000539960 TONSLQ96HA7 1378 aa19.29■□□□□ 0.68
PRPF19-204ENST00000539960 FAM135BQ49AJ0 1406 aa19.28■□□□□ 0.68
PRPF19-204ENST00000539960 ADGRL3Q9HAR2 1447 aa19.28■□□□□ 0.68
PRPF19-204ENST00000539960 ADGRB1O14514 1584 aa19.27■□□□□ 0.68
PRPF19-204ENST00000539960 DCCP43146 1447 aa19.27■□□□□ 0.68
PRPF19-204ENST00000539960 CCER1Q8TC90 406 aaPredicted RBP19.27■□□□□ 0.68
PRPF19-204ENST00000539960 PRAM1Q96QH2 718 aa19.27■□□□□ 0.68
PRPF19-204ENST00000539960 POGKQ9P215 609 aa19.27■□□□□ 0.68
PRPF19-204ENST00000539960 PLEKHH1Q9ULM0 1364 aa19.27■□□□□ 0.68
PRPF19-204ENST00000539960 HSPA1LP34931 641 aa19.26■□□□□ 0.67
PRPF19-204ENST00000539960 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.25■□□□□ 0.67
PRPF19-204ENST00000539960 NBPF8Q3BBV2 869 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms