RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 KCNA6P17658 529 aa25.4■■□□□ 1.66
DDB1-215ENST00000539712 PLEKHG1Q9ULL1 1385 aa25.4■■□□□ 1.66
DDB1-215ENST00000539712 CHGAP10645 457 aaKnown RBP25.39■■□□□ 1.66
DDB1-215ENST00000539712 XIRP1Q702N8 1843 aaKnown RBP25.38■■□□□ 1.65
DDB1-215ENST00000539712 SENP3Q9H4L4 574 aaPredicted RBP25.37■■□□□ 1.65
DDB1-215ENST00000539712 HSPA1LP34931 641 aa25.36■■□□□ 1.65
DDB1-215ENST00000539712 HDGFP51858 240 aaKnown RBP25.35■■□□□ 1.65
DDB1-215ENST00000539712 NUTM2DQ5VT03 806 aaPredicted RBP25.35■■□□□ 1.65
DDB1-215ENST00000539712 SCAF1Q9H7N4 1312 aaKnown RBP25.35■■□□□ 1.65
DDB1-215ENST00000539712 SPHKAPQ2M3C7 1700 aa25.34■■□□□ 1.65
DDB1-215ENST00000539712 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.34■■□□□ 1.65
DDB1-215ENST00000539712 PPP1R15AO75807 674 aaPredicted RBP25.33■■□□□ 1.65
DDB1-215ENST00000539712 TMEM94Q12767 1356 aa25.32■■□□□ 1.64
DDB1-215ENST00000539712 BCANQ96GW7 911 aa25.32■■□□□ 1.64
DDB1-215ENST00000539712 NWD1Q149M9 1564 aa25.31■■□□□ 1.64
DDB1-215ENST00000539712 ADAMTS13Q76LX8 1427 aa25.31■■□□□ 1.64
DDB1-215ENST00000539712 TBX22Q9Y458 520 aa25.31■■□□□ 1.64
DDB1-215ENST00000539712 RBM33Q96EV2 1170 aaKnown RBP25.3■■□□□ 1.64
DDB1-215ENST00000539712 PROSER2Q86WR7 435 aaPredicted RBP25.28■■□□□ 1.64
DDB1-215ENST00000539712 TRIM52Q96A61 297 aa25.28■■□□□ 1.64
DDB1-215ENST00000539712 TRPM2O94759 1503 aa25.27■■□□□ 1.64
DDB1-215ENST00000539712 CLTCL1P53675 1640 aa25.27■■□□□ 1.64
DDB1-215ENST00000539712 DISP3Q9P2K9 1392 aa25.27■■□□□ 1.64
DDB1-215ENST00000539712 NKTRP30414 1462 aaKnown RBP25.27■■□□□ 1.64
DDB1-215ENST00000539712 CHD2O14647 1828 aaKnown RBP25.26■■□□□ 1.63
DDB1-215ENST00000539712 SLC4A1APQ9BWU0 796 aaKnown RBP25.23■■□□□ 1.63
DDB1-215ENST00000539712 DIP2AQ14689 1571 aa25.2■■□□□ 1.62
DDB1-215ENST00000539712 PIK3R4Q99570 1358 aa25.19■■□□□ 1.62
DDB1-215ENST00000539712 NRXN3Q9Y4C0 1643 aa25.19■■□□□ 1.62
DDB1-215ENST00000539712 ZNF326Q5BKZ1 582 aaKnown RBP25.19■■□□□ 1.62
DDB1-215ENST00000539712 ILDR2Q71H61 639 aa25.19■■□□□ 1.62
DDB1-215ENST00000539712 PTPRUQ92729 1446 aa25.18■■□□□ 1.62
DDB1-215ENST00000539712 NEXMIFQ5QGS0 1516 aa25.17■■□□□ 1.62
DDB1-215ENST00000539712 FAM135BQ49AJ0 1406 aa25.17■■□□□ 1.62
DDB1-215ENST00000539712 SETBP1Q9Y6X0 1596 aa25.17■■□□□ 1.62
DDB1-215ENST00000539712 FOXD1Q16676 465 aa25.16■■□□□ 1.62
DDB1-215ENST00000539712 AMOTL2Q9Y2J4 779 aa25.13■■□□□ 1.61
DDB1-215ENST00000539712 KIF1BO60333 1816 aa25.13■■□□□ 1.61
DDB1-215ENST00000539712 NCOA3Q9Y6Q9 1424 aa25.12■■□□□ 1.61
DDB1-215ENST00000539712 MPHOSPH9Q99550 1183 aa25.12■■□□□ 1.61
DDB1-215ENST00000539712 METP08581 1390 aa25.12■■□□□ 1.61
DDB1-215ENST00000539712 MSH6P52701 1360 aa25.11■■□□□ 1.61
DDB1-215ENST00000539712 SLAIN2Q9P270 581 aa25.08■■□□□ 1.61
DDB1-215ENST00000539712 MED1Q15648 1581 aaPredicted RBP25.07■■□□□ 1.6
DDB1-215ENST00000539712 SETD5Q9C0A6 1442 aa25.07■■□□□ 1.6
DDB1-215ENST00000539712 XRN1Q8IZH2 1706 aaKnown RBP25.06■■□□□ 1.6
DDB1-215ENST00000539712 ROBO1Q9Y6N7 1651 aa25.06■■□□□ 1.6
DDB1-215ENST00000539712 RPGRIP1LQ68CZ1 1315 aa25.05■■□□□ 1.6
DDB1-215ENST00000539712 C19orf44Q9H6X5 657 aa25.04■■□□□ 1.6
DDB1-215ENST00000539712 VGFO15240 615 aaPredicted RBP25.03■■□□□ 1.6
DDB1-215ENST00000539712 SPATA31E1Q6ZUB1 1445 aa25.02■■□□□ 1.6
DDB1-215ENST00000539712 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.01■■□□□ 1.59
DDB1-215ENST00000539712 C14orf37Q86TY3 774 aa25■■□□□ 1.59
DDB1-215ENST00000539712 CCDC144AA2RUR9 1427 aa24.99■■□□□ 1.59
DDB1-215ENST00000539712 SETD1AO15047 1707 aaKnown RBP24.99■■□□□ 1.59
DDB1-215ENST00000539712 PPLO60437 1756 aa24.99■■□□□ 1.59
DDB1-215ENST00000539712 RAB3GAP2Q9H2M9 1393 aa24.99■■□□□ 1.59
DDB1-215ENST00000539712 ACIN1Q9UKV3 1341 aaKnown RBP24.98■■□□□ 1.59
DDB1-215ENST00000539712 CADPS2Q86UW7 1296 aa24.97■■□□□ 1.59
DDB1-215ENST00000539712 ATF3P18847 181 aa24.95■■□□□ 1.58
DDB1-215ENST00000539712 ADGRF5Q8IZF2 1346 aa24.94■■□□□ 1.58
DDB1-215ENST00000539712 RGL3Q3MIN7 710 aa24.94■■□□□ 1.58
DDB1-215ENST00000539712 DCCP43146 1447 aa24.92■■□□□ 1.58
DDB1-215ENST00000539712 SOCS7O14512 581 aa24.91■■□□□ 1.58
DDB1-215ENST00000539712 ROBO2Q9HCK4 1378 aa24.91■■□□□ 1.58
DDB1-215ENST00000539712 PRAG1Q86YV5 1406 aa24.9■■□□□ 1.58
DDB1-215ENST00000539712 PTCH1Q13635 1447 aa24.88■■□□□ 1.57
DDB1-215ENST00000539712 ADGRL3Q9HAR2 1447 aa24.88■■□□□ 1.57
DDB1-215ENST00000539712 BRINP3Q76B58 766 aa24.88■■□□□ 1.57
DDB1-215ENST00000539712 PHLPP1O60346 1717 aa24.88■■□□□ 1.57
DDB1-215ENST00000539712 IFT172Q9UG01 1749 aa24.88■■□□□ 1.57
DDB1-215ENST00000539712 ANKRD30BQ9BXX2 1392 aa24.88■■□□□ 1.57
DDB1-215ENST00000539712 MST1RQ04912 1400 aa24.87■■□□□ 1.57
DDB1-215ENST00000539712 RGS17Q9UGC6 210 aaPredicted RBP24.87■■□□□ 1.57
DDB1-215ENST00000539712 COL16A1Q07092 1604 aaPredicted RBP24.86■■□□□ 1.57
DDB1-215ENST00000539712 HRCP23327 699 aa24.85■■□□□ 1.57
DDB1-215ENST00000539712 NALCNQ8IZF0 1738 aa24.85■■□□□ 1.57
DDB1-215ENST00000539712 AHDC1Q5TGY3 1603 aaPredicted RBP24.84■■□□□ 1.57
DDB1-215ENST00000539712 PHF23Q9BUL5 403 aaPredicted RBP24.83■■□□□ 1.57
DDB1-215ENST00000539712 PIK3C2GO75747 1445 aa24.82■■□□□ 1.56
DDB1-215ENST00000539712 JCADQ9P266 1359 aa24.81■■□□□ 1.56
DDB1-215ENST00000539712 ASXL1Q8IXJ9 1541 aa24.8■■□□□ 1.56
DDB1-215ENST00000539712 NRXN1Q9ULB1 1477 aa24.78■■□□□ 1.56
DDB1-215ENST00000539712 TMEM132EQ6IEE7 984 aa24.78■■□□□ 1.56
DDB1-215ENST00000539712 TECPR2O15040 1411 aa24.77■■□□□ 1.56
DDB1-215ENST00000539712 LRPPRCP42704 1394 aaKnown RBP24.76■■□□□ 1.55
DDB1-215ENST00000539712 C14orf93Q9H972 538 aaKnown RBP24.75■■□□□ 1.55
DDB1-215ENST00000539712 ABCC11Q96J66 1382 aa24.75■■□□□ 1.55
DDB1-215ENST00000539712 C1orf167Q5SNV9 1468 aa24.75■■□□□ 1.55
DDB1-215ENST00000539712 STK26Q9P289 416 aa24.74■■□□□ 1.55
DDB1-215ENST00000539712 MYOM2P54296 1465 aa24.73■■□□□ 1.55
DDB1-215ENST00000539712 DDX17Q92841 729 aaKnown RBP24.73■■□□□ 1.55
DDB1-215ENST00000539712 NHSL1Q5SYE7 1610 aa24.72■■□□□ 1.55
DDB1-215ENST00000539712 WAPLQ7Z5K2 1190 aa24.72■■□□□ 1.55
DDB1-215ENST00000539712 CFAP70Q5T0N1 1121 aa24.71■■□□□ 1.55
DDB1-215ENST00000539712 LRP6O75581 1613 aa24.71■■□□□ 1.55
DDB1-215ENST00000539712 PLEKHH1Q9ULM0 1364 aa24.7■■□□□ 1.55
DDB1-215ENST00000539712 SPATA31A6Q5VVP1 1343 aa24.7■■□□□ 1.54
DDB1-215ENST00000539712 ORAI2Q96SN7 254 aa24.7■■□□□ 1.54
DDB1-215ENST00000539712 YTHDC2Q9H6S0 1430 aaKnown RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms