RNA–Protein interactions for RNA: ENST00000539409.5

FAM60A-206, Transcript of Protein FAM60A, humanhuman

TSL 1 (best) BASIC

Gene FAM60A, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-206ENST00000539409 ZNF142P52746 1687 aaPredicted RBP16.36■□□□□ 0.21
FAM60A-206ENST00000539409 CEP170BQ9Y4F5 1589 aaPredicted RBP16.36■□□□□ 0.21
FAM60A-206ENST00000539409 RPGRIP1LQ68CZ1 1315 aa16.35■□□□□ 0.21
FAM60A-206ENST00000539409 STAG3Q9UJ98 1225 aa16.35■□□□□ 0.21
FAM60A-206ENST00000539409 NRXN1Q9ULB1 1477 aa16.34■□□□□ 0.21
FAM60A-206ENST00000539409 STAC3Q96MF2 364 aa16.34■□□□□ 0.21
FAM60A-206ENST00000539409 SETD1BQ9UPS6 1966 aaKnown RBP16.33■□□□□ 0.21
FAM60A-206ENST00000539409 TRPM1Q7Z4N2 1603 aa16.33■□□□□ 0.2
FAM60A-206ENST00000539409 PHF23Q9BUL5 403 aaPredicted RBP16.33■□□□□ 0.2
FAM60A-206ENST00000539409 RALGAPBQ86X10 1494 aa16.32■□□□□ 0.2
FAM60A-206ENST00000539409 ZFYVE9O95405 1425 aa16.32■□□□□ 0.2
FAM60A-206ENST00000539409 ADGRF5Q8IZF2 1346 aa16.31■□□□□ 0.2
FAM60A-206ENST00000539409 RIMS2Q9UQ26 1411 aa16.31■□□□□ 0.2
FAM60A-206ENST00000539409 PIK3C2GO75747 1445 aa16.3■□□□□ 0.2
FAM60A-206ENST00000539409 TMEM2Q9UHN6 1383 aa16.3■□□□□ 0.2
FAM60A-206ENST00000539409 SLIT1O75093 1534 aa16.29■□□□□ 0.2
FAM60A-206ENST00000539409 KIAA1210Q9ULL0 1709 aa16.29■□□□□ 0.2
FAM60A-206ENST00000539409 ARHGAP23Q9P227 1491 aa16.29■□□□□ 0.2
FAM60A-206ENST00000539409 NUTM2DQ5VT03 806 aaPredicted RBP16.28■□□□□ 0.2
FAM60A-206ENST00000539409 VGFO15240 615 aaPredicted RBP16.27■□□□□ 0.2
FAM60A-206ENST00000539409 THEMISQ8N1K5 641 aaPredicted RBP16.25■□□□□ 0.19
FAM60A-206ENST00000539409 LAMC1P11047 1609 aa16.25■□□□□ 0.19
FAM60A-206ENST00000539409 ROCK2O75116 1388 aaKnown RBP16.24■□□□□ 0.19
FAM60A-206ENST00000539409 GPRASP1Q5JY77 1395 aa16.24■□□□□ 0.19
FAM60A-206ENST00000539409 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.23■□□□□ 0.19
FAM60A-206ENST00000539409 NRXN3Q9Y4C0 1643 aa16.23■□□□□ 0.19
FAM60A-206ENST00000539409 NBPF1Q3BBV0 1214 aa16.23■□□□□ 0.19
FAM60A-206ENST00000539409 SETBP1Q9Y6X0 1596 aa16.22■□□□□ 0.19
FAM60A-206ENST00000539409 IQGAP1P46940 1657 aa16.22■□□□□ 0.19
FAM60A-206ENST00000539409 CFAP70Q5T0N1 1121 aa16.21■□□□□ 0.19
FAM60A-206ENST00000539409 LTKP29376 864 aa16.21■□□□□ 0.19
FAM60A-206ENST00000539409 HDGFP51858 240 aaKnown RBP16.21■□□□□ 0.19
FAM60A-206ENST00000539409 SCAF11Q99590 1463 aaKnown RBP16.21■□□□□ 0.18
FAM60A-206ENST00000539409 SETD1AO15047 1707 aaKnown RBP16.21■□□□□ 0.18
FAM60A-206ENST00000539409 C14orf93Q9H972 538 aaKnown RBP16.2■□□□□ 0.18
FAM60A-206ENST00000539409 ADGRB1O14514 1584 aa16.2■□□□□ 0.18
FAM60A-206ENST00000539409 ALKQ9UM73 1620 aa16.2■□□□□ 0.18
FAM60A-206ENST00000539409 CARD11Q9BXL7 1154 aa16.2■□□□□ 0.18
FAM60A-206ENST00000539409 PLEKHG1Q9ULL1 1385 aa16.19■□□□□ 0.18
FAM60A-206ENST00000539409 ASXL1Q8IXJ9 1541 aa16.19■□□□□ 0.18
FAM60A-206ENST00000539409 TXNDC2Q86VQ3 553 aa16.19■□□□□ 0.18
FAM60A-206ENST00000539409 EID1Q9Y6B2 187 aa16.18■□□□□ 0.18
FAM60A-206ENST00000539409 LMTK3Q96Q04 1460 aa16.18■□□□□ 0.18
FAM60A-206ENST00000539409 SENP3Q9H4L4 574 aaPredicted RBP16.18■□□□□ 0.18
FAM60A-206ENST00000539409 USP47Q96K76 1375 aa16.18■□□□□ 0.18
FAM60A-206ENST00000539409 POLR1AO95602 1720 aaPredicted RBP16.17■□□□□ 0.18
FAM60A-206ENST00000539409 EIF4G2P78344 907 aaKnown RBP eCLIP16.16■□□□□ 0.18
FAM60A-206ENST00000539409 ADAMTS13Q76LX8 1427 aa16.15■□□□□ 0.18
FAM60A-206ENST00000539409 HSPA5P11021 654 aaKnown RBP16.14■□□□□ 0.17
FAM60A-206ENST00000539409 MED14O60244 1454 aa16.14■□□□□ 0.17
FAM60A-206ENST00000539409 TMEM132EQ6IEE7 984 aa16.13■□□□□ 0.17
FAM60A-206ENST00000539409 ANKLE2Q86XL3 938 aa16.13■□□□□ 0.17
FAM60A-206ENST00000539409 DIP2AQ14689 1571 aa16.13■□□□□ 0.17
FAM60A-206ENST00000539409 HIRIP3Q9BW71 556 aaPredicted RBP16.12■□□□□ 0.17
FAM60A-206ENST00000539409 ZNF316A6NFI3 1004 aaPredicted RBP16.11■□□□□ 0.17
FAM60A-206ENST00000539409 METP08581 1390 aa16.11■□□□□ 0.17
FAM60A-206ENST00000539409 BCANQ96GW7 911 aa16.1■□□□□ 0.17
FAM60A-206ENST00000539409 ARHGEF28Q8N1W1 1705 aaKnown RBP16.1■□□□□ 0.17
FAM60A-206ENST00000539409 YTHDC2Q9H6S0 1430 aaKnown RBP16.1■□□□□ 0.17
FAM60A-206ENST00000539409 HSPA2P54652 639 aa16.09■□□□□ 0.17
FAM60A-206ENST00000539409 NPHP4O75161 1426 aaPredicted RBP16.09■□□□□ 0.17
FAM60A-206ENST00000539409 EIF3AQ14152 1382 aaKnown RBP16.08■□□□□ 0.17
FAM60A-206ENST00000539409 ST20-MTHFSA0A0A6YYL1 179 aa16.08■□□□□ 0.16
FAM60A-206ENST00000539409 SLC26A8Q96RN1 970 aa16.08■□□□□ 0.16
FAM60A-206ENST00000539409 NCKAP5LQ9HCH0 1330 aa16.07■□□□□ 0.16
FAM60A-206ENST00000539409 KNDC1Q76NI1 1749 aa16.07■□□□□ 0.16
FAM60A-206ENST00000539409 LRPPRCP42704 1394 aaKnown RBP16.06■□□□□ 0.16
FAM60A-206ENST00000539409 TRAK1Q9UPV9 953 aa16.06■□□□□ 0.16
FAM60A-206ENST00000539409 TBX22Q9Y458 520 aa16.06■□□□□ 0.16
FAM60A-206ENST00000539409 STRCQ7RTU9 1775 aa16.05■□□□□ 0.16
FAM60A-206ENST00000539409 DLC1Q96QB1 1528 aa16.05■□□□□ 0.16
FAM60A-206ENST00000539409 QRICH2Q9H0J4 1663 aa16.04■□□□□ 0.16
FAM60A-206ENST00000539409 TECPR2O15040 1411 aa16.04■□□□□ 0.16
FAM60A-206ENST00000539409 STK26Q9P289 416 aa16.04■□□□□ 0.16
FAM60A-206ENST00000539409 CPS1P31327 1500 aa16.04■□□□□ 0.16
FAM60A-206ENST00000539409 ABCC11Q96J66 1382 aa16.04■□□□□ 0.16
FAM60A-206ENST00000539409 PTPRUQ92729 1446 aa16.03■□□□□ 0.16
FAM60A-206ENST00000539409 TESK2Q96S53 571 aa16.03■□□□□ 0.16
FAM60A-206ENST00000539409 XRN1Q8IZH2 1706 aaKnown RBP16.03■□□□□ 0.16
FAM60A-206ENST00000539409 PIK3R4Q99570 1358 aa16.02■□□□□ 0.16
FAM60A-206ENST00000539409 CENPJQ9HC77 1338 aaPredicted RBP16.02■□□□□ 0.15
FAM60A-206ENST00000539409 CHD2O14647 1828 aaKnown RBP16.01■□□□□ 0.15
FAM60A-206ENST00000539409 SBNO2Q9Y2G9 1366 aa16■□□□□ 0.15
FAM60A-206ENST00000539409 C11orf95C9JLR9 678 aaPredicted RBP16■□□□□ 0.15
FAM60A-206ENST00000539409 WASHC2AQ641Q2 1341 aa15.99■□□□□ 0.15
FAM60A-206ENST00000539409 PRAM1Q96QH2 718 aa15.99■□□□□ 0.15
FAM60A-206ENST00000539409 PTCH1Q13635 1447 aa15.98■□□□□ 0.15
FAM60A-206ENST00000539409 FAM135BQ49AJ0 1406 aa15.98■□□□□ 0.15
FAM60A-206ENST00000539409 ROBO2Q9HCK4 1378 aa15.98■□□□□ 0.15
FAM60A-206ENST00000539409 DISP3Q9P2K9 1392 aa15.98■□□□□ 0.15
FAM60A-206ENST00000539409 CCDC7Q96M83 1385 aa15.98■□□□□ 0.15
FAM60A-206ENST00000539409 NWD1Q149M9 1564 aa15.97■□□□□ 0.15
FAM60A-206ENST00000539409 AMOTL2Q9Y2J4 779 aa15.97■□□□□ 0.15
FAM60A-206ENST00000539409 PLEKHH1Q9ULM0 1364 aa15.97■□□□□ 0.15
FAM60A-206ENST00000539409 KIF7Q2M1P5 1343 aa15.97■□□□□ 0.15
FAM60A-206ENST00000539409 SIRT1Q96EB6 747 aa15.96■□□□□ 0.15
FAM60A-206ENST00000539409 SAFB2Q14151 953 aaKnown RBP eCLIP15.95■□□□□ 0.144e-6■■■□□ 19
FAM60A-206ENST00000539409 WAPLQ7Z5K2 1190 aa15.95■□□□□ 0.14
FAM60A-206ENST00000539409 POGKQ9P215 609 aa15.95■□□□□ 0.14
FAM60A-206ENST00000539409 TMF1P82094 1093 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms