RNA–Protein interactions for RNA: ENST00000538753.5

COPS7A-209, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 754 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-209ENST00000538753 CHD2O14647 1828 aaKnown RBP22.06■■□□□ 1.12
COPS7A-209ENST00000538753 SLC26A8Q96RN1 970 aa22.04■■□□□ 1.12
COPS7A-209ENST00000538753 HSPA1LP34931 641 aa22.03■■□□□ 1.12
COPS7A-209ENST00000538753 RIMS2Q9UQ26 1411 aa22.03■■□□□ 1.12
COPS7A-209ENST00000538753 HDGFP51858 240 aaKnown RBP22.02■■□□□ 1.12
COPS7A-209ENST00000538753 NWD1Q149M9 1564 aa22.02■■□□□ 1.12
COPS7A-209ENST00000538753 KCNA6P17658 529 aa22.01■■□□□ 1.11
COPS7A-209ENST00000538753 PLEKHG1Q9ULL1 1385 aa22■■□□□ 1.11
COPS7A-209ENST00000538753 CHGAP10645 457 aaKnown RBP21.99■■□□□ 1.11
COPS7A-209ENST00000538753 BCANQ96GW7 911 aa21.99■■□□□ 1.11
COPS7A-209ENST00000538753 NAIPQ13075 1403 aa21.98■■□□□ 1.11
COPS7A-209ENST00000538753 PPP1R15AO75807 674 aaPredicted RBP21.97■■□□□ 1.11
COPS7A-209ENST00000538753 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.97■■□□□ 1.11
COPS7A-209ENST00000538753 KIF1BO60333 1816 aa21.96■■□□□ 1.11
COPS7A-209ENST00000538753 NKTRP30414 1462 aaKnown RBP21.96■■□□□ 1.11
COPS7A-209ENST00000538753 SENP3Q9H4L4 574 aaPredicted RBP21.95■■□□□ 1.1
COPS7A-209ENST00000538753 TMEM94Q12767 1356 aa21.95■■□□□ 1.1
COPS7A-209ENST00000538753 ILDR2Q71H61 639 aa21.94■■□□□ 1.1
COPS7A-209ENST00000538753 DIP2AQ14689 1571 aa21.93■■□□□ 1.1
COPS7A-209ENST00000538753 PROSER2Q86WR7 435 aaPredicted RBP21.93■■□□□ 1.1
COPS7A-209ENST00000538753 MED1Q15648 1581 aaPredicted RBP21.91■■□□□ 1.1
COPS7A-209ENST00000538753 HFM1A2PYH4 1435 aa21.91■■□□□ 1.1
COPS7A-209ENST00000538753 NUTM2DQ5VT03 806 aaPredicted RBP21.91■■□□□ 1.1
COPS7A-209ENST00000538753 TBX22Q9Y458 520 aa21.91■■□□□ 1.1
COPS7A-209ENST00000538753 CLTCL1P53675 1640 aa21.91■■□□□ 1.1
COPS7A-209ENST00000538753 TRPM2O94759 1503 aa21.89■■□□□ 1.09
COPS7A-209ENST00000538753 ADAMTS13Q76LX8 1427 aa21.89■■□□□ 1.09
COPS7A-209ENST00000538753 RBM33Q96EV2 1170 aaKnown RBP21.88■■□□□ 1.09
COPS7A-209ENST00000538753 ROBO1Q9Y6N7 1651 aa21.88■■□□□ 1.09
COPS7A-209ENST00000538753 NRXN3Q9Y4C0 1643 aa21.87■■□□□ 1.09
COPS7A-209ENST00000538753 FAM135BQ49AJ0 1406 aa21.85■■□□□ 1.09
COPS7A-209ENST00000538753 MSH6P52701 1360 aa21.84■■□□□ 1.09
COPS7A-209ENST00000538753 PIK3R4Q99570 1358 aa21.84■■□□□ 1.09
COPS7A-209ENST00000538753 SETBP1Q9Y6X0 1596 aa21.83■■□□□ 1.09
COPS7A-209ENST00000538753 TRIM52Q96A61 297 aa21.83■■□□□ 1.09
COPS7A-209ENST00000538753 ZNF326Q5BKZ1 582 aaKnown RBP21.82■■□□□ 1.08
COPS7A-209ENST00000538753 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.82■■□□□ 1.08
COPS7A-209ENST00000538753 NCOA3Q9Y6Q9 1424 aa21.8■■□□□ 1.08
COPS7A-209ENST00000538753 NEXMIFQ5QGS0 1516 aa21.8■■□□□ 1.08
COPS7A-209ENST00000538753 XRN1Q8IZH2 1706 aaKnown RBP21.79■■□□□ 1.08
COPS7A-209ENST00000538753 SOCS7O14512 581 aa21.78■■□□□ 1.08
COPS7A-209ENST00000538753 PHLPP1O60346 1717 aa21.77■■□□□ 1.08
COPS7A-209ENST00000538753 SLC4A1APQ9BWU0 796 aaKnown RBP21.77■■□□□ 1.08
COPS7A-209ENST00000538753 PTPRUQ92729 1446 aa21.77■■□□□ 1.08
COPS7A-209ENST00000538753 PPLO60437 1756 aa21.76■■□□□ 1.07
COPS7A-209ENST00000538753 SLAIN2Q9P270 581 aa21.76■■□□□ 1.07
COPS7A-209ENST00000538753 AMOTL2Q9Y2J4 779 aa21.75■■□□□ 1.07
COPS7A-209ENST00000538753 SETD1AO15047 1707 aaKnown RBP21.73■■□□□ 1.07
COPS7A-209ENST00000538753 C14orf37Q86TY3 774 aa21.73■■□□□ 1.07
COPS7A-209ENST00000538753 C19orf44Q9H6X5 657 aa21.71■■□□□ 1.07
COPS7A-209ENST00000538753 PHF23Q9BUL5 403 aaPredicted RBP21.7■■□□□ 1.06
COPS7A-209ENST00000538753 METP08581 1390 aa21.7■■□□□ 1.06
COPS7A-209ENST00000538753 CADPS2Q86UW7 1296 aa21.68■■□□□ 1.06
COPS7A-209ENST00000538753 VGFO15240 615 aaPredicted RBP21.67■■□□□ 1.06
COPS7A-209ENST00000538753 ATF3P18847 181 aa21.67■■□□□ 1.06
COPS7A-209ENST00000538753 RPGRIP1LQ68CZ1 1315 aa21.66■■□□□ 1.06
COPS7A-209ENST00000538753 FOXD1Q16676 465 aa21.66■■□□□ 1.06
COPS7A-209ENST00000538753 NALCNQ8IZF0 1738 aa21.66■■□□□ 1.06
COPS7A-209ENST00000538753 IFT172Q9UG01 1749 aa21.66■■□□□ 1.06
COPS7A-209ENST00000538753 COL16A1Q07092 1604 aaPredicted RBP21.66■■□□□ 1.06
COPS7A-209ENST00000538753 DCCP43146 1447 aa21.64■■□□□ 1.06
COPS7A-209ENST00000538753 MPHOSPH9Q99550 1183 aa21.63■■□□□ 1.05
COPS7A-209ENST00000538753 AHDC1Q5TGY3 1603 aaPredicted RBP21.62■■□□□ 1.05
COPS7A-209ENST00000538753 ACIN1Q9UKV3 1341 aaKnown RBP21.61■■□□□ 1.05
COPS7A-209ENST00000538753 CCDC144AA2RUR9 1427 aa21.61■■□□□ 1.05
COPS7A-209ENST00000538753 SETD5Q9C0A6 1442 aa21.6■■□□□ 1.05
COPS7A-209ENST00000538753 SHPRHQ149N8 1683 aa21.59■■□□□ 1.05
COPS7A-209ENST00000538753 JCADQ9P266 1359 aa21.59■■□□□ 1.05
COPS7A-209ENST00000538753 ADGRL3Q9HAR2 1447 aa21.58■■□□□ 1.05
COPS7A-209ENST00000538753 NHSL1Q5SYE7 1610 aa21.58■■□□□ 1.04
COPS7A-209ENST00000538753 SPATA31E1Q6ZUB1 1445 aa21.57■■□□□ 1.04
COPS7A-209ENST00000538753 RGS17Q9UGC6 210 aaPredicted RBP21.57■■□□□ 1.04
COPS7A-209ENST00000538753 MST1RQ04912 1400 aa21.56■■□□□ 1.04
COPS7A-209ENST00000538753 PTCH1Q13635 1447 aa21.55■■□□□ 1.04
COPS7A-209ENST00000538753 BRINP3Q76B58 766 aa21.55■■□□□ 1.04
COPS7A-209ENST00000538753 ASXL1Q8IXJ9 1541 aa21.55■■□□□ 1.04
COPS7A-209ENST00000538753 PRAG1Q86YV5 1406 aa21.55■■□□□ 1.04
COPS7A-209ENST00000538753 RGL3Q3MIN7 710 aa21.53■■□□□ 1.04
COPS7A-209ENST00000538753 ANKRD30BQ9BXX2 1392 aa21.51■■□□□ 1.03
COPS7A-209ENST00000538753 RAB3GAP2Q9H2M9 1393 aa21.51■■□□□ 1.03
COPS7A-209ENST00000538753 ROBO2Q9HCK4 1378 aa21.51■■□□□ 1.03
COPS7A-209ENST00000538753 ADGRF5Q8IZF2 1346 aa21.51■■□□□ 1.03
COPS7A-209ENST00000538753 SPATA31A6Q5VVP1 1343 aa21.49■■□□□ 1.03
COPS7A-209ENST00000538753 KNDC1Q76NI1 1749 aa21.49■■□□□ 1.03
COPS7A-209ENST00000538753 LAMC1P11047 1609 aa21.47■■□□□ 1.03
COPS7A-209ENST00000538753 LRP6O75581 1613 aa21.46■■□□□ 1.03
COPS7A-209ENST00000538753 PIK3C2GO75747 1445 aa21.45■■□□□ 1.02
COPS7A-209ENST00000538753 C1orf167Q5SNV9 1468 aa21.45■■□□□ 1.02
COPS7A-209ENST00000538753 POTEAQ6S8J7 498 aa21.44■■□□□ 1.02
COPS7A-209ENST00000538753 TECPR2O15040 1411 aa21.42■■□□□ 1.02
COPS7A-209ENST00000538753 CDC42BPGQ6DT37 1551 aa21.41■■□□□ 1.02
COPS7A-209ENST00000538753 LRRC59Q96AG4 307 aaKnown RBP21.4■■□□□ 1.02
COPS7A-209ENST00000538753 NRXN1Q9ULB1 1477 aa21.39■■□□□ 1.02
COPS7A-209ENST00000538753 LRPPRCP42704 1394 aaKnown RBP21.39■■□□□ 1.02
COPS7A-209ENST00000538753 MEX3CQ5U5Q3 659 aaKnown RBP21.39■■□□□ 1.01
COPS7A-209ENST00000538753 DDX17Q92841 729 aaKnown RBP21.39■■□□□ 1.01
COPS7A-209ENST00000538753 STK26Q9P289 416 aa21.39■■□□□ 1.01
COPS7A-209ENST00000538753 MYOM2P54296 1465 aa21.39■■□□□ 1.01
COPS7A-209ENST00000538753 ABCC11Q96J66 1382 aa21.38■■□□□ 1.01
COPS7A-209ENST00000538753 TMEM132EQ6IEE7 984 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms