RNA–Protein interactions for RNA: ENST00000538318.5

PTPN6-210, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-210ENST00000538318 SENP3Q9H4L4 574 aaPredicted RBP25.67■■□□□ 1.7
PTPN6-210ENST00000538318 E9PCH4 1651 aa25.67■■□□□ 1.7
PTPN6-210ENST00000538318 NWD1Q149M9 1564 aa25.66■■□□□ 1.7
PTPN6-210ENST00000538318 HDGFP51858 240 aaKnown RBP25.66■■□□□ 1.7
PTPN6-210ENST00000538318 PROSER2Q86WR7 435 aaPredicted RBP25.66■■□□□ 1.7
PTPN6-210ENST00000538318 PLEKHG1Q9ULL1 1385 aa25.66■■□□□ 1.7
PTPN6-210ENST00000538318 IQGAP3Q86VI3 1631 aa25.66■■□□□ 1.7
PTPN6-210ENST00000538318 RIMS2Q9UQ26 1411 aa25.65■■□□□ 1.7
PTPN6-210ENST00000538318 NKTRP30414 1462 aaKnown RBP25.65■■□□□ 1.7
PTPN6-210ENST00000538318 FAM135BQ49AJ0 1406 aa25.64■■□□□ 1.7
PTPN6-210ENST00000538318 BCANQ96GW7 911 aa25.64■■□□□ 1.7
PTPN6-210ENST00000538318 NUP155O75694 1391 aa25.6■■□□□ 1.69
PTPN6-210ENST00000538318 PPP1R15AO75807 674 aaPredicted RBP25.6■■□□□ 1.69
PTPN6-210ENST00000538318 ITGAEP38570 1179 aa25.6■■□□□ 1.69
PTPN6-210ENST00000538318 RBM33Q96EV2 1170 aaKnown RBP25.6■■□□□ 1.69
PTPN6-210ENST00000538318 CHD2O14647 1828 aaKnown RBP25.6■■□□□ 1.69
PTPN6-210ENST00000538318 PPARGC1BQ86YN6 1023 aaKnown RBP25.59■■□□□ 1.69
PTPN6-210ENST00000538318 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.59■■□□□ 1.69
PTPN6-210ENST00000538318 PHF23Q9BUL5 403 aaPredicted RBP25.59■■□□□ 1.69
PTPN6-210ENST00000538318 CHGAP10645 457 aaKnown RBP25.58■■□□□ 1.69
PTPN6-210ENST00000538318 TBX22Q9Y458 520 aa25.58■■□□□ 1.69
PTPN6-210ENST00000538318 ROBO1Q9Y6N7 1651 aa25.55■■□□□ 1.68
PTPN6-210ENST00000538318 MSH6P52701 1360 aa25.54■■□□□ 1.68
PTPN6-210ENST00000538318 ADAMTS13Q76LX8 1427 aa25.52■■□□□ 1.68
PTPN6-210ENST00000538318 NUTM2DQ5VT03 806 aaPredicted RBP25.51■■□□□ 1.67
PTPN6-210ENST00000538318 DIP2AQ14689 1571 aa25.5■■□□□ 1.67
PTPN6-210ENST00000538318 NCOA3Q9Y6Q9 1424 aa25.49■■□□□ 1.67
PTPN6-210ENST00000538318 SLAIN2Q9P270 581 aa25.48■■□□□ 1.67
PTPN6-210ENST00000538318 PIK3R4Q99570 1358 aa25.47■■□□□ 1.67
PTPN6-210ENST00000538318 RRBP1Q9P2E9 1410 aaKnown RBP25.46■■□□□ 1.67
PTPN6-210ENST00000538318 SPHKAPQ2M3C7 1700 aa25.45■■□□□ 1.66
PTPN6-210ENST00000538318 RGS17Q9UGC6 210 aaPredicted RBP25.44■■□□□ 1.66
PTPN6-210ENST00000538318 TRPM2O94759 1503 aa25.42■■□□□ 1.66
PTPN6-210ENST00000538318 PHLPP1O60346 1717 aa25.39■■□□□ 1.65
PTPN6-210ENST00000538318 NAIPQ13075 1403 aa25.38■■□□□ 1.65
PTPN6-210ENST00000538318 C14orf37Q86TY3 774 aa25.38■■□□□ 1.65
PTPN6-210ENST00000538318 C19orf44Q9H6X5 657 aa25.38■■□□□ 1.65
PTPN6-210ENST00000538318 AMOTL2Q9Y2J4 779 aa25.38■■□□□ 1.65
PTPN6-210ENST00000538318 PTPRUQ92729 1446 aa25.37■■□□□ 1.65
PTPN6-210ENST00000538318 NRXN3Q9Y4C0 1643 aa25.37■■□□□ 1.65
PTPN6-210ENST00000538318 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.37■■□□□ 1.65
PTPN6-210ENST00000538318 SETBP1Q9Y6X0 1596 aa25.36■■□□□ 1.65
PTPN6-210ENST00000538318 CADPS2Q86UW7 1296 aa25.36■■□□□ 1.65
PTPN6-210ENST00000538318 ZNF326Q5BKZ1 582 aaKnown RBP25.34■■□□□ 1.65
PTPN6-210ENST00000538318 CLTCL1P53675 1640 aa25.34■■□□□ 1.65
PTPN6-210ENST00000538318 JCADQ9P266 1359 aa25.33■■□□□ 1.65
PTPN6-210ENST00000538318 ATF3P18847 181 aa25.33■■□□□ 1.65
PTPN6-210ENST00000538318 XRN1Q8IZH2 1706 aaKnown RBP25.32■■□□□ 1.64
PTPN6-210ENST00000538318 COL16A1Q07092 1604 aaPredicted RBP25.31■■□□□ 1.64
PTPN6-210ENST00000538318 NEXMIFQ5QGS0 1516 aa25.29■■□□□ 1.64
PTPN6-210ENST00000538318 HFM1A2PYH4 1435 aa25.29■■□□□ 1.64
PTPN6-210ENST00000538318 POTEAQ6S8J7 498 aa25.28■■□□□ 1.64
PTPN6-210ENST00000538318 METP08581 1390 aa25.28■■□□□ 1.64
PTPN6-210ENST00000538318 KIF1BO60333 1816 aa25.28■■□□□ 1.64
PTPN6-210ENST00000538318 DCCP43146 1447 aa25.27■■□□□ 1.64
PTPN6-210ENST00000538318 AHDC1Q5TGY3 1603 aaPredicted RBP25.26■■□□□ 1.63
PTPN6-210ENST00000538318 TRIM52Q96A61 297 aa25.23■■□□□ 1.63
PTPN6-210ENST00000538318 BRINP3Q76B58 766 aa25.22■■□□□ 1.63
PTPN6-210ENST00000538318 SPATA31A6Q5VVP1 1343 aa25.21■■□□□ 1.63
PTPN6-210ENST00000538318 MST1RQ04912 1400 aa25.19■■□□□ 1.62
PTPN6-210ENST00000538318 SHPRHQ149N8 1683 aa25.18■■□□□ 1.62
PTPN6-210ENST00000538318 VGFO15240 615 aaPredicted RBP25.18■■□□□ 1.62
PTPN6-210ENST00000538318 SLC4A1APQ9BWU0 796 aaKnown RBP25.18■■□□□ 1.62
PTPN6-210ENST00000538318 LRP6O75581 1613 aa25.18■■□□□ 1.62
PTPN6-210ENST00000538318 ADGRL3Q9HAR2 1447 aa25.17■■□□□ 1.62
PTPN6-210ENST00000538318 ASXL1Q8IXJ9 1541 aa25.16■■□□□ 1.62
PTPN6-210ENST00000538318 RPGRIP1LQ68CZ1 1315 aa25.15■■□□□ 1.62
PTPN6-210ENST00000538318 SETD1AO15047 1707 aaKnown RBP25.14■■□□□ 1.61
PTPN6-210ENST00000538318 NALCNQ8IZF0 1738 aa25.12■■□□□ 1.61
PTPN6-210ENST00000538318 NHSL1Q5SYE7 1610 aa25.12■■□□□ 1.61
PTPN6-210ENST00000538318 PTCH1Q13635 1447 aa25.11■■□□□ 1.61
PTPN6-210ENST00000538318 SETD5Q9C0A6 1442 aa25.11■■□□□ 1.61
PTPN6-210ENST00000538318 PPLO60437 1756 aa25.1■■□□□ 1.61
PTPN6-210ENST00000538318 MEX3CQ5U5Q3 659 aaKnown RBP25.09■■□□□ 1.61
PTPN6-210ENST00000538318 PRAG1Q86YV5 1406 aa25.08■■□□□ 1.61
PTPN6-210ENST00000538318 ZNF772Q68DY9 489 aaPredicted RBP25.07■■□□□ 1.6
PTPN6-210ENST00000538318 ROBO2Q9HCK4 1378 aa25.06■■□□□ 1.6
PTPN6-210ENST00000538318 FOXD1Q16676 465 aa25.06■■□□□ 1.6
PTPN6-210ENST00000538318 LRRC59Q96AG4 307 aaKnown RBP25.06■■□□□ 1.6
PTPN6-210ENST00000538318 C1orf167Q5SNV9 1468 aa25.04■■□□□ 1.6
PTPN6-210ENST00000538318 NUTM2BA6NNL0 878 aaPredicted RBP25.02■■□□□ 1.6
PTPN6-210ENST00000538318 NUTM2EB1AL46 878 aaPredicted RBP25.02■■□□□ 1.6
PTPN6-210ENST00000538318 NUTM2AQ8IVF1 878 aaPredicted RBP25.02■■□□□ 1.6
PTPN6-210ENST00000538318 DDX17Q92841 729 aaKnown RBP25.02■■□□□ 1.6
PTPN6-210ENST00000538318 CCDC144AA2RUR9 1427 aa25.01■■□□□ 1.59
PTPN6-210ENST00000538318 MPHOSPH9Q99550 1183 aa25■■□□□ 1.59
PTPN6-210ENST00000538318 LAMC1P11047 1609 aa24.99■■□□□ 1.59
PTPN6-210ENST00000538318 SPATA31E1Q6ZUB1 1445 aa24.98■■□□□ 1.59
PTPN6-210ENST00000538318 PNPLA6Q8IY17 1366 aa24.98■■□□□ 1.59
PTPN6-210ENST00000538318 ADGRF5Q8IZF2 1346 aa24.97■■□□□ 1.59
PTPN6-210ENST00000538318 RGL3Q3MIN7 710 aa24.95■■□□□ 1.58
PTPN6-210ENST00000538318 ORAI2Q96SN7 254 aa24.95■■□□□ 1.58
PTPN6-210ENST00000538318 ANKRD30BQ9BXX2 1392 aa24.94■■□□□ 1.58
PTPN6-210ENST00000538318 IFT172Q9UG01 1749 aa24.94■■□□□ 1.58
PTPN6-210ENST00000538318 AFF2P51816 1311 aa24.93■■□□□ 1.58
PTPN6-210ENST00000538318 SOS2Q07890 1332 aaPredicted RBP24.93■■□□□ 1.58
PTPN6-210ENST00000538318 RXRBP28702 533 aa24.93■■□□□ 1.58
PTPN6-210ENST00000538318 ACIN1Q9UKV3 1341 aaKnown RBP24.91■■□□□ 1.58
PTPN6-210ENST00000538318 CDC42BPGQ6DT37 1551 aa24.9■■□□□ 1.58
PTPN6-210ENST00000538318 TECPR2O15040 1411 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms