RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 FAM184AQ8NB25 1140 aa13.84□□□□□ -0.19
LINC00346-201ENST00000538077 ATF3P18847 181 aa13.84□□□□□ -0.19
LINC00346-201ENST00000538077 SLC4A3P48751 1232 aa13.84□□□□□ -0.19
LINC00346-201ENST00000538077 NLRP13Q86W25 1043 aa13.84□□□□□ -0.19
LINC00346-201ENST00000538077 MYBBP1AQ9BQG0 1328 aaKnown RBP13.83□□□□□ -0.2
LINC00346-201ENST00000538077 NEXNQ0ZGT2 675 aa13.83□□□□□ -0.2
LINC00346-201ENST00000538077 AMOTL1Q8IY63 956 aa13.82□□□□□ -0.2
LINC00346-201ENST00000538077 MTMR7Q9Y216 660 aa13.82□□□□□ -0.2
LINC00346-201ENST00000538077 UACAQ9BZF9 1416 aa13.82□□□□□ -0.2
LINC00346-201ENST00000538077 ST18O60284 1047 aa13.82□□□□□ -0.2
LINC00346-201ENST00000538077 PPP1R1BQ9UD71 204 aaPredicted RBP13.82□□□□□ -0.2
LINC00346-201ENST00000538077 ANO2Q9NQ90 1003 aa13.82□□□□□ -0.2
LINC00346-201ENST00000538077 RSPH4AQ5TD94 716 aa13.81□□□□□ -0.2
LINC00346-201ENST00000538077 PTMSP20962 102 aa13.81□□□□□ -0.2
LINC00346-201ENST00000538077 COG6Q9Y2V7 657 aa13.81□□□□□ -0.2
LINC00346-201ENST00000538077 CSPP1Q1MSJ5 1256 aa13.81□□□□□ -0.2
LINC00346-201ENST00000538077 CEP89Q96ST8 783 aa13.81□□□□□ -0.2
LINC00346-201ENST00000538077 CRBNQ96SW2 442 aa13.81□□□□□ -0.2
LINC00346-201ENST00000538077 BICRAQ9NZM4 1560 aa13.81□□□□□ -0.2
LINC00346-201ENST00000538077 RIPK4P57078 832 aa13.8□□□□□ -0.2
LINC00346-201ENST00000538077 CCDC34Q96HJ3 373 aa13.8□□□□□ -0.2
LINC00346-201ENST00000538077 DIAPH3Q9NSV4 1193 aa13.8□□□□□ -0.2
LINC00346-201ENST00000538077 CABP2Q9NPB3 220 aa13.8□□□□□ -0.2
LINC00346-201ENST00000538077 GOLGA6L3A6NEY3 463 aa13.8□□□□□ -0.2
LINC00346-201ENST00000538077 DIAPH1O60610 1272 aaKnown RBP13.8□□□□□ -0.2
LINC00346-201ENST00000538077 SYNE3Q6ZMZ3 975 aa13.8□□□□□ -0.2
LINC00346-201ENST00000538077 IFIT2P09913 472 aaKnown RBP13.79□□□□□ -0.2
LINC00346-201ENST00000538077 RBM33Q96EV2 1170 aaKnown RBP13.79□□□□□ -0.2
LINC00346-201ENST00000538077 NLRP2Q9NX02 1062 aa13.79□□□□□ -0.2
LINC00346-201ENST00000538077 NCAPD3P42695 1498 aa13.78□□□□□ -0.2
LINC00346-201ENST00000538077 NUTM2BA6NNL0 878 aaPredicted RBP13.78□□□□□ -0.2
LINC00346-201ENST00000538077 NUTM2EB1AL46 878 aaPredicted RBP13.78□□□□□ -0.2
LINC00346-201ENST00000538077 CCDC27Q2M243 656 aa13.78□□□□□ -0.2
LINC00346-201ENST00000538077 NUTM2AQ8IVF1 878 aaPredicted RBP13.78□□□□□ -0.2
LINC00346-201ENST00000538077 APAF1O14727 1248 aa13.78□□□□□ -0.2
LINC00346-201ENST00000538077 NFXL1Q6ZNB6 911 aa13.78□□□□□ -0.2
LINC00346-201ENST00000538077 ZKSCAN2Q63HK3 967 aa13.77□□□□□ -0.2
LINC00346-201ENST00000538077 FKBP5Q13451 457 aaPredicted RBP13.77□□□□□ -0.2
LINC00346-201ENST00000538077 TMEM132EQ6IEE7 984 aa13.77□□□□□ -0.2
LINC00346-201ENST00000538077 EXOC6Q8TAG9 804 aa13.77□□□□□ -0.2
LINC00346-201ENST00000538077 TSPYL4Q9UJ04 414 aa13.77□□□□□ -0.2
LINC00346-201ENST00000538077 CNKSR2Q8WXI2 1034 aa13.77□□□□□ -0.21
LINC00346-201ENST00000538077 USP47Q96K76 1375 aa13.77□□□□□ -0.21
LINC00346-201ENST00000538077 PCMTD1Q96MG8 357 aaPredicted RBP13.77□□□□□ -0.21
LINC00346-201ENST00000538077 STRN4Q9NRL3 753 aa13.77□□□□□ -0.21
LINC00346-201ENST00000538077 RAD54L2Q9Y4B4 1467 aa13.76□□□□□ -0.21
LINC00346-201ENST00000538077 ZNF644Q9H582 1327 aaPredicted RBP13.76□□□□□ -0.21
LINC00346-201ENST00000538077 RIC3Q7Z5B4 369 aa13.75□□□□□ -0.21
LINC00346-201ENST00000538077 NEUROD6Q96NK8 337 aa13.75□□□□□ -0.21
LINC00346-201ENST00000538077 TPM3P06753 285 aa13.75□□□□□ -0.21
LINC00346-201ENST00000538077 KRI1Q8N9T8 703 aaKnown RBP13.75□□□□□ -0.21
LINC00346-201ENST00000538077 ESCO1Q5FWF5 840 aa13.75□□□□□ -0.21
LINC00346-201ENST00000538077 GGNBP2Q9H3C7 697 aa13.75□□□□□ -0.21
LINC00346-201ENST00000538077 CCAR2Q8N163 923 aaKnown RBP13.74□□□□□ -0.21
LINC00346-201ENST00000538077 RAPGEF4Q8WZA2 1011 aa13.74□□□□□ -0.21
LINC00346-201ENST00000538077 TRIM29Q14134 588 aa13.74□□□□□ -0.21
LINC00346-201ENST00000538077 G3BP1Q13283 466 aaKnown RBP eCLIP13.73□□□□□ -0.21
LINC00346-201ENST00000538077 PHLDB1Q86UU1 1377 aa13.73□□□□□ -0.21
LINC00346-201ENST00000538077 E9PSI1 815 aa13.73□□□□□ -0.21
LINC00346-201ENST00000538077 RBM42Q9BTD8 480 aaKnown RBP13.73□□□□□ -0.21
LINC00346-201ENST00000538077 PIP4K2BP78356 416 aa13.73□□□□□ -0.21
LINC00346-201ENST00000538077 DDX58O95786 925 aaKnown RBP13.73□□□□□ -0.21
LINC00346-201ENST00000538077 KIF3AQ9Y496 699 aa13.72□□□□□ -0.21
LINC00346-201ENST00000538077 IPO9Q96P70 1041 aaKnown RBP13.72□□□□□ -0.21
LINC00346-201ENST00000538077 TPM2P07951 284 aa13.71□□□□□ -0.21
LINC00346-201ENST00000538077 GOLGA6L1Q8N7Z2 621 aa13.71□□□□□ -0.21
LINC00346-201ENST00000538077 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.71□□□□□ -0.21
LINC00346-201ENST00000538077 SYNJ1O43426 1573 aa13.7□□□□□ -0.22
LINC00346-201ENST00000538077 WASHC4Q2M389 1173 aa13.7□□□□□ -0.22
LINC00346-201ENST00000538077 STK11IPQ8N1F8 1099 aa13.7□□□□□ -0.22
LINC00346-201ENST00000538077 PHF14O94880 888 aa13.7□□□□□ -0.22
LINC00346-201ENST00000538077 RRP1P56182 461 aaKnown RBP13.7□□□□□ -0.22
LINC00346-201ENST00000538077 AQRO60306 1485 aaKnown RBP eCLIP13.7□□□□□ -0.22
LINC00346-201ENST00000538077 ERICH2A1L162 156 aa13.7□□□□□ -0.22
LINC00346-201ENST00000538077 ARHGAP5Q13017 1502 aa13.7□□□□□ -0.22
LINC00346-201ENST00000538077 CPLX1O14810 134 aa13.69□□□□□ -0.22
LINC00346-201ENST00000538077 NESP48681 1621 aa13.69□□□□□ -0.22
LINC00346-201ENST00000538077 TSR1Q2NL82 804 aaKnown RBP13.69□□□□□ -0.22
LINC00346-201ENST00000538077 BCL11BQ9C0K0 894 aaPredicted RBP13.69□□□□□ -0.22
LINC00346-201ENST00000538077 MRC2Q9UBG0 1479 aa13.69□□□□□ -0.22
LINC00346-201ENST00000538077 ABTB2Q8N961 1025 aa13.69□□□□□ -0.22
LINC00346-201ENST00000538077 PDE3BQ13370 1112 aa13.69□□□□□ -0.22
LINC00346-201ENST00000538077 NLRP6P59044 892 aa13.69□□□□□ -0.22
LINC00346-201ENST00000538077 CCDC43Q96MW1 224 aaKnown RBP13.69□□□□□ -0.22
LINC00346-201ENST00000538077 GAPVD1Q14C86 1478 aa13.69□□□□□ -0.22
LINC00346-201ENST00000538077 GOLGA6L19H0YKK7 550 aa13.68□□□□□ -0.22
LINC00346-201ENST00000538077 HMGXB3Q12766 1538 aa13.68□□□□□ -0.22
LINC00346-201ENST00000538077 CENPQQ7L2Z9 268 aaPredicted RBP13.68□□□□□ -0.22
LINC00346-201ENST00000538077 ZNF592Q92610 1267 aa13.68□□□□□ -0.22
LINC00346-201ENST00000538077 TRDNQ13061 729 aa13.67□□□□□ -0.22
LINC00346-201ENST00000538077 IKQ13123 557 aaPredicted RBP13.67□□□□□ -0.22
LINC00346-201ENST00000538077 FGD5Q6ZNL6 1462 aa13.67□□□□□ -0.22
LINC00346-201ENST00000538077 LRRFIP1Q32MZ4 808 aaKnown RBP13.67□□□□□ -0.22
LINC00346-201ENST00000538077 RUFY2Q8WXA3 655 aa13.67□□□□□ -0.22
LINC00346-201ENST00000538077 BECN2A8MW95 431 aa13.67□□□□□ -0.22
LINC00346-201ENST00000538077 PATL2C9JE40 543 aaKnown RBP13.67□□□□□ -0.22
LINC00346-201ENST00000538077 FAM161AQ3B820 660 aa13.67□□□□□ -0.22
LINC00346-201ENST00000538077 DDX49Q9Y6V7 483 aaKnown RBP13.66□□□□□ -0.22
LINC00346-201ENST00000538077 DHX57Q6P158 1386 aaKnown RBP13.66□□□□□ -0.22
LINC00346-201ENST00000538077 DZIP1LQ8IYY4 767 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms