RNA–Protein interactions for RNA: ENST00000537568.1

LMO3-216, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 594 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-216ENST00000537568 PTGER2P43116 358 aa13.97□□□□□ -0.17
LMO3-216ENST00000537568 FOSBP53539 338 aa13.97□□□□□ -0.17
LMO3-216ENST00000537568 DMRTA1Q5VZB9 504 aa13.97□□□□□ -0.17
LMO3-216ENST00000537568 MADDQ8WXG6 1647 aa13.96□□□□□ -0.17
LMO3-216ENST00000537568 KIAA0586Q9BVV6 1533 aa13.95□□□□□ -0.18
LMO3-216ENST00000537568 KCNK17Q96T54 332 aa13.95□□□□□ -0.18
LMO3-216ENST00000537568 PTPRGP23470 1445 aa13.95□□□□□ -0.18
LMO3-216ENST00000537568 ERICH3Q5RHP9 1530 aa13.95□□□□□ -0.18
LMO3-216ENST00000537568 ADGRD1Q6QNK2 874 aa13.94□□□□□ -0.18
LMO3-216ENST00000537568 DPYSL4O14531 572 aa13.93□□□□□ -0.18
LMO3-216ENST00000537568 CUL7Q14999 1698 aa13.93□□□□□ -0.18
LMO3-216ENST00000537568 BCL2L12Q9HB09 334 aa13.92□□□□□ -0.18
LMO3-216ENST00000537568 BCORL1Q5H9F3 1711 aa13.9□□□□□ -0.18
LMO3-216ENST00000537568 UHRF1BP1LA0JNW5 1464 aa13.9□□□□□ -0.18
LMO3-216ENST00000537568 KCNH8Q96L42 1107 aa13.89□□□□□ -0.19
LMO3-216ENST00000537568 MAGI3Q5TCQ9 1506 aa13.89□□□□□ -0.19
LMO3-216ENST00000537568 TK2O00142 265 aa13.88□□□□□ -0.19
LMO3-216ENST00000537568 ZDHHC16Q969W1 377 aa13.88□□□□□ -0.19
LMO3-216ENST00000537568 TTBK1Q5TCY1 1321 aaPredicted RBP13.88□□□□□ -0.19
LMO3-216ENST00000537568 KDM5BQ9UGL1 1544 aa13.87□□□□□ -0.19
LMO3-216ENST00000537568 ADAM33Q9BZ11 813 aa13.87□□□□□ -0.19
LMO3-216ENST00000537568 PCDHGA10Q9Y5H3 936 aa13.86□□□□□ -0.19
LMO3-216ENST00000537568 WRNQ14191 1432 aaPredicted RBP eCLIP13.85□□□□□ -0.19
LMO3-216ENST00000537568 PTPREP23469 700 aa13.85□□□□□ -0.19
LMO3-216ENST00000537568 LTBP4Q8N2S1 1624 aa13.84□□□□□ -0.19
LMO3-216ENST00000537568 HRO43593 1189 aa13.84□□□□□ -0.19
LMO3-216ENST00000537568 SRCAPQ6ZRS2 3230 aa13.84□□□□□ -0.19
LMO3-216ENST00000537568 MED1Q15648 1581 aaPredicted RBP13.83□□□□□ -0.19
LMO3-216ENST00000537568 TNIKQ9UKE5 1360 aa13.83□□□□□ -0.2
LMO3-216ENST00000537568 CD109Q6YHK3 1445 aa13.82□□□□□ -0.2
LMO3-216ENST00000537568 RIMS1Q86UR5 1692 aaKnown RBP13.82□□□□□ -0.2
LMO3-216ENST00000537568 E2F4Q16254 413 aa13.82□□□□□ -0.2
LMO3-216ENST00000537568 WDR70Q9NW82 654 aa13.82□□□□□ -0.2
LMO3-216ENST00000537568 UACAQ9BZF9 1416 aa13.81□□□□□ -0.2
LMO3-216ENST00000537568 ARAP3Q8WWN8 1544 aa13.81□□□□□ -0.2
LMO3-216ENST00000537568 PHF14O94880 888 aa13.81□□□□□ -0.2
LMO3-216ENST00000537568 VPS9D1Q9Y2B5 631 aa13.81□□□□□ -0.2
LMO3-216ENST00000537568 STRCQ7RTU9 1775 aa13.81□□□□□ -0.2
LMO3-216ENST00000537568 YEATS2Q9ULM3 1422 aa13.81□□□□□ -0.2
LMO3-216ENST00000537568 TULP1O00294 542 aaPredicted RBP13.79□□□□□ -0.2
LMO3-216ENST00000537568 TIMELESSQ9UNS1 1208 aa13.79□□□□□ -0.2
LMO3-216ENST00000537568 WDR7Q9Y4E6 1490 aa13.79□□□□□ -0.2
LMO3-216ENST00000537568 PDIA6Q15084 440 aa13.78□□□□□ -0.2
LMO3-216ENST00000537568 TYW1BQ6NUM6 668 aa13.78□□□□□ -0.2
LMO3-216ENST00000537568 IQSEC2Q5JU85 1478 aa13.78□□□□□ -0.2
LMO3-216ENST00000537568 ZCCHC11Q5TAX3 1644 aaKnown RBP13.78□□□□□ -0.2
LMO3-216ENST00000537568 FBXW7Q969H0 707 aa13.77□□□□□ -0.21
LMO3-216ENST00000537568 ZBED2Q9BTP6 218 aa13.77□□□□□ -0.21
LMO3-216ENST00000537568 DDX12PQ92771 950 aa13.76□□□□□ -0.21
LMO3-216ENST00000537568 SLC4A5Q9BY07 1137 aa13.76□□□□□ -0.21
LMO3-216ENST00000537568 GTF3C3Q9Y5Q9 886 aa13.74□□□□□ -0.21
LMO3-216ENST00000537568 ARID4BQ4LE39 1312 aaPredicted RBP13.73□□□□□ -0.21
LMO3-216ENST00000537568 RAPGEF3O95398 923 aa13.73□□□□□ -0.21
LMO3-216ENST00000537568 EPAS1Q99814 870 aa13.73□□□□□ -0.21
LMO3-216ENST00000537568 ARIH1Q9Y4X5 557 aaPredicted RBP13.73□□□□□ -0.21
LMO3-216ENST00000537568 CFAP43Q8NDM7 1665 aa13.72□□□□□ -0.21
LMO3-216ENST00000537568 PPP1R3GB7ZBB8 358 aa13.72□□□□□ -0.21
LMO3-216ENST00000537568 SPDYE16A6NNV3 312 aaPredicted RBP13.71□□□□□ -0.21
LMO3-216ENST00000537568 COL9A1P20849 921 aa13.71□□□□□ -0.21
LMO3-216ENST00000537568 STAC3Q96MF2 364 aa13.71□□□□□ -0.21
LMO3-216ENST00000537568 PTPRTO14522 1441 aa13.7□□□□□ -0.22
LMO3-216ENST00000537568 FRMPD1Q5SYB0 1578 aa13.68□□□□□ -0.22
LMO3-216ENST00000537568 BHMG1C9JSJ3 638 aaPredicted RBP13.68□□□□□ -0.22
LMO3-216ENST00000537568 RBM33Q96EV2 1170 aaKnown RBP13.68□□□□□ -0.22
LMO3-216ENST00000537568 CARMIL2Q6F5E8 1435 aa13.67□□□□□ -0.22
LMO3-216ENST00000537568 PROX2Q3B8N5 592 aa13.67□□□□□ -0.22
LMO3-216ENST00000537568 C6orf132Q5T0Z8 1188 aa13.67□□□□□ -0.22
LMO3-216ENST00000537568 KCTD12Q96CX2 325 aaKnown RBP13.67□□□□□ -0.22
LMO3-216ENST00000537568 DISP1Q96F81 1524 aa13.66□□□□□ -0.22
LMO3-216ENST00000537568 UBAP1LF5GYI3 381 aa13.66□□□□□ -0.22
LMO3-216ENST00000537568 HSPA1LP34931 641 aa13.66□□□□□ -0.22
LMO3-216ENST00000537568 SIGLEC1Q9BZZ2 1709 aa13.64□□□□□ -0.23
LMO3-216ENST00000537568 BIVM-ERCC5R4GMW8 1640 aa13.64□□□□□ -0.23
LMO3-216ENST00000537568 EN1Q05925 392 aaPredicted RBP13.63□□□□□ -0.23
LMO3-216ENST00000537568 HCSTQ9UBK5 93 aa13.63□□□□□ -0.23
LMO3-216ENST00000537568 TTC37Q6PGP7 1564 aa13.62□□□□□ -0.23
LMO3-216ENST00000537568 PREX1Q8TCU6 1659 aa13.62□□□□□ -0.23
LMO3-216ENST00000537568 ARHGEF40Q8TER5 1519 aa13.61□□□□□ -0.23
LMO3-216ENST00000537568 GRXCR2A6NFK2 248 aa13.61□□□□□ -0.23
LMO3-216ENST00000537568 MAP3K7O43318 606 aa13.61□□□□□ -0.23
LMO3-216ENST00000537568 TSR1Q2NL82 804 aaKnown RBP13.61□□□□□ -0.23
LMO3-216ENST00000537568 MRPL50Q8N5N7 158 aaKnown RBP13.61□□□□□ -0.23
LMO3-216ENST00000537568 P3H3Q8IVL6 736 aa13.6□□□□□ -0.23
LMO3-216ENST00000537568 NBPF3Q9H094 633 aa13.6□□□□□ -0.23
LMO3-216ENST00000537568 RGS17Q9UGC6 210 aaPredicted RBP13.6□□□□□ -0.23
LMO3-216ENST00000537568 RABGEF1Q9UJ41 708 aa13.6□□□□□ -0.23
LMO3-216ENST00000537568 PRIM1P49642 420 aaKnown RBP13.59□□□□□ -0.23
LMO3-216ENST00000537568 CEBPAP49715 358 aaPredicted RBP13.58□□□□□ -0.24
LMO3-216ENST00000537568 KCNV2Q8TDN2 545 aa13.58□□□□□ -0.24
LMO3-216ENST00000537568 IGF1RP08069 1367 aa13.58□□□□□ -0.24
LMO3-216ENST00000537568 PHLDB1Q86UU1 1377 aa13.58□□□□□ -0.24
LMO3-216ENST00000537568 TMEM132AQ24JP5 1023 aa13.57□□□□□ -0.24
LMO3-216ENST00000537568 GOLGA8CPA6NN73 597 aa13.56□□□□□ -0.24
LMO3-216ENST00000537568 KIAA1468Q9P260 1216 aa13.55□□□□□ -0.24
LMO3-216ENST00000537568 WNT2BQ93097 391 aa13.54□□□□□ -0.24
LMO3-216ENST00000537568 ZNF335Q9H4Z2 1342 aaPredicted RBP13.54□□□□□ -0.24
LMO3-216ENST00000537568 TRIM6-TRIM34B2RNG4 842 aa13.53□□□□□ -0.24
LMO3-216ENST00000537568 OSBPP22059 807 aa13.53□□□□□ -0.24
LMO3-216ENST00000537568 THSD4Q6ZMP0 1018 aa13.53□□□□□ -0.24
LMO3-216ENST00000537568 ARHGEF1Q92888 912 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms