RNA–Protein interactions for RNA: ENST00000536917.1

LRTOMT-212, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 3 BASIC

Gene LRTOMT, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-212ENST00000536917 SLC26A8Q96RN1 970 aa12.47□□□□□ -0.41
LRTOMT-212ENST00000536917 CHD2O14647 1828 aaKnown RBP12.46□□□□□ -0.41
LRTOMT-212ENST00000536917 PLEKHG1Q9ULL1 1385 aa12.46□□□□□ -0.41
LRTOMT-212ENST00000536917 RIMS2Q9UQ26 1411 aa12.45□□□□□ -0.42
LRTOMT-212ENST00000536917 NUP155O75694 1391 aa12.45□□□□□ -0.42
LRTOMT-212ENST00000536917 SCAF1Q9H7N4 1312 aaKnown RBP12.45□□□□□ -0.42
LRTOMT-212ENST00000536917 NKTRP30414 1462 aaKnown RBP12.45□□□□□ -0.42
LRTOMT-212ENST00000536917 TMEM94Q12767 1356 aa12.44□□□□□ -0.42
LRTOMT-212ENST00000536917 MED1Q15648 1581 aaPredicted RBP12.44□□□□□ -0.42
LRTOMT-212ENST00000536917 ITGAEP38570 1179 aa12.44□□□□□ -0.42
LRTOMT-212ENST00000536917 NAIPQ13075 1403 aa12.43□□□□□ -0.42
LRTOMT-212ENST00000536917 FAM135BQ49AJ0 1406 aa12.43□□□□□ -0.42
LRTOMT-212ENST00000536917 ADAMTS13Q76LX8 1427 aa12.43□□□□□ -0.42
LRTOMT-212ENST00000536917 SPHKAPQ2M3C7 1700 aa12.42□□□□□ -0.42
LRTOMT-212ENST00000536917 SOCS7O14512 581 aa12.42□□□□□ -0.42
LRTOMT-212ENST00000536917 TBX22Q9Y458 520 aa12.42□□□□□ -0.42
LRTOMT-212ENST00000536917 HDGFP51858 240 aaKnown RBP12.41□□□□□ -0.42
LRTOMT-212ENST00000536917 PROSER2Q86WR7 435 aaPredicted RBP12.4□□□□□ -0.42
LRTOMT-212ENST00000536917 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.4□□□□□ -0.42
LRTOMT-212ENST00000536917 DIP2AQ14689 1571 aa12.39□□□□□ -0.43
LRTOMT-212ENST00000536917 RBM33Q96EV2 1170 aaKnown RBP12.39□□□□□ -0.43
LRTOMT-212ENST00000536917 PIK3R4Q99570 1358 aa12.39□□□□□ -0.43
LRTOMT-212ENST00000536917 NRXN3Q9Y4C0 1643 aa12.38□□□□□ -0.43
LRTOMT-212ENST00000536917 ROBO1Q9Y6N7 1651 aa12.38□□□□□ -0.43
LRTOMT-212ENST00000536917 HFM1A2PYH4 1435 aa12.37□□□□□ -0.43
LRTOMT-212ENST00000536917 NCOA3Q9Y6Q9 1424 aa12.37□□□□□ -0.43
LRTOMT-212ENST00000536917 PPP1R15AO75807 674 aaPredicted RBP12.37□□□□□ -0.43
LRTOMT-212ENST00000536917 CHGAP10645 457 aaKnown RBP12.37□□□□□ -0.43
LRTOMT-212ENST00000536917 CLTCL1P53675 1640 aa12.37□□□□□ -0.43
LRTOMT-212ENST00000536917 TRPM2O94759 1503 aa12.37□□□□□ -0.43
LRTOMT-212ENST00000536917 SETBP1Q9Y6X0 1596 aa12.36□□□□□ -0.43
LRTOMT-212ENST00000536917 NUTM2DQ5VT03 806 aaPredicted RBP12.36□□□□□ -0.43
LRTOMT-212ENST00000536917 PTPRUQ92729 1446 aa12.36□□□□□ -0.43
LRTOMT-212ENST00000536917 BCANQ96GW7 911 aa12.35□□□□□ -0.43
LRTOMT-212ENST00000536917 SENP3Q9H4L4 574 aaPredicted RBP12.35□□□□□ -0.43
LRTOMT-212ENST00000536917 MSH6P52701 1360 aa12.34□□□□□ -0.43
LRTOMT-212ENST00000536917 NEXMIFQ5QGS0 1516 aa12.34□□□□□ -0.43
LRTOMT-212ENST00000536917 XRN1Q8IZH2 1706 aaKnown RBP12.34□□□□□ -0.43
LRTOMT-212ENST00000536917 KIF1BO60333 1816 aa12.33□□□□□ -0.44
LRTOMT-212ENST00000536917 SLAIN2Q9P270 581 aa12.33□□□□□ -0.44
LRTOMT-212ENST00000536917 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.33□□□□□ -0.44
LRTOMT-212ENST00000536917 RGS17Q9UGC6 210 aaPredicted RBP12.31□□□□□ -0.44
LRTOMT-212ENST00000536917 METP08581 1390 aa12.3□□□□□ -0.44
LRTOMT-212ENST00000536917 AMOTL2Q9Y2J4 779 aa12.3□□□□□ -0.44
LRTOMT-212ENST00000536917 SETD1AO15047 1707 aaKnown RBP12.29□□□□□ -0.44
LRTOMT-212ENST00000536917 C19orf44Q9H6X5 657 aa12.29□□□□□ -0.44
LRTOMT-212ENST00000536917 COL16A1Q07092 1604 aaPredicted RBP12.29□□□□□ -0.44
LRTOMT-212ENST00000536917 PHLPP1O60346 1717 aa12.28□□□□□ -0.44
LRTOMT-212ENST00000536917 ZNF326Q5BKZ1 582 aaKnown RBP12.27□□□□□ -0.45
LRTOMT-212ENST00000536917 CADPS2Q86UW7 1296 aa12.27□□□□□ -0.45
LRTOMT-212ENST00000536917 DCCP43146 1447 aa12.27□□□□□ -0.45
LRTOMT-212ENST00000536917 AHDC1Q5TGY3 1603 aaPredicted RBP12.26□□□□□ -0.45
LRTOMT-212ENST00000536917 PPLO60437 1756 aa12.26□□□□□ -0.45
LRTOMT-212ENST00000536917 PHF23Q9BUL5 403 aaPredicted RBP12.26□□□□□ -0.45
LRTOMT-212ENST00000536917 TRIM52Q96A61 297 aa12.25□□□□□ -0.45
LRTOMT-212ENST00000536917 SLC4A1APQ9BWU0 796 aaKnown RBP12.25□□□□□ -0.45
LRTOMT-212ENST00000536917 PRAG1Q86YV5 1406 aa12.25□□□□□ -0.45
LRTOMT-212ENST00000536917 ATF3P18847 181 aa12.24□□□□□ -0.45
LRTOMT-212ENST00000536917 RPGRIP1LQ68CZ1 1315 aa12.24□□□□□ -0.45
LRTOMT-212ENST00000536917 JCADQ9P266 1359 aa12.24□□□□□ -0.45
LRTOMT-212ENST00000536917 NALCNQ8IZF0 1738 aa12.23□□□□□ -0.45
LRTOMT-212ENST00000536917 MST1RQ04912 1400 aa12.23□□□□□ -0.45
LRTOMT-212ENST00000536917 C14orf37Q86TY3 774 aa12.23□□□□□ -0.45
LRTOMT-212ENST00000536917 SPATA31E1Q6ZUB1 1445 aa12.22□□□□□ -0.45
LRTOMT-212ENST00000536917 ADGRL3Q9HAR2 1447 aa12.22□□□□□ -0.45
LRTOMT-212ENST00000536917 VGFO15240 615 aaPredicted RBP12.22□□□□□ -0.45
LRTOMT-212ENST00000536917 BRINP3Q76B58 766 aa12.22□□□□□ -0.45
LRTOMT-212ENST00000536917 SHPRHQ149N8 1683 aa12.22□□□□□ -0.45
LRTOMT-212ENST00000536917 PTCH1Q13635 1447 aa12.21□□□□□ -0.45
LRTOMT-212ENST00000536917 IFT172Q9UG01 1749 aa12.21□□□□□ -0.45
LRTOMT-212ENST00000536917 FOXD1Q16676 465 aa12.21□□□□□ -0.45
LRTOMT-212ENST00000536917 POTEAQ6S8J7 498 aa12.21□□□□□ -0.45
LRTOMT-212ENST00000536917 NHSL1Q5SYE7 1610 aa12.21□□□□□ -0.46
LRTOMT-212ENST00000536917 ASXL1Q8IXJ9 1541 aa12.21□□□□□ -0.46
LRTOMT-212ENST00000536917 LRP6O75581 1613 aa12.2□□□□□ -0.46
LRTOMT-212ENST00000536917 MPHOSPH9Q99550 1183 aa12.2□□□□□ -0.46
LRTOMT-212ENST00000536917 ROBO2Q9HCK4 1378 aa12.19□□□□□ -0.46
LRTOMT-212ENST00000536917 LAMC1P11047 1609 aa12.19□□□□□ -0.46
LRTOMT-212ENST00000536917 SPATA31A6Q5VVP1 1343 aa12.18□□□□□ -0.46
LRTOMT-212ENST00000536917 SETD5Q9C0A6 1442 aa12.18□□□□□ -0.46
LRTOMT-212ENST00000536917 CCDC144AA2RUR9 1427 aa12.17□□□□□ -0.46
LRTOMT-212ENST00000536917 ADGRF5Q8IZF2 1346 aa12.16□□□□□ -0.46
LRTOMT-212ENST00000536917 C1orf167Q5SNV9 1468 aa12.16□□□□□ -0.46
LRTOMT-212ENST00000536917 ACIN1Q9UKV3 1341 aaKnown RBP12.15□□□□□ -0.46
LRTOMT-212ENST00000536917 TECPR2O15040 1411 aa12.15□□□□□ -0.46
LRTOMT-212ENST00000536917 ANKRD30BQ9BXX2 1392 aa12.15□□□□□ -0.46
LRTOMT-212ENST00000536917 PIK3C2GO75747 1445 aa12.13□□□□□ -0.47
LRTOMT-212ENST00000536917 KNDC1Q76NI1 1749 aa12.12□□□□□ -0.47
LRTOMT-212ENST00000536917 RGL3Q3MIN7 710 aa12.12□□□□□ -0.47
LRTOMT-212ENST00000536917 DDX17Q92841 729 aaKnown RBP12.12□□□□□ -0.47
LRTOMT-212ENST00000536917 NRXN1Q9ULB1 1477 aa12.12□□□□□ -0.47
LRTOMT-212ENST00000536917 CDC42BPGQ6DT37 1551 aa12.12□□□□□ -0.47
LRTOMT-212ENST00000536917 LRPPRCP42704 1394 aaKnown RBP12.11□□□□□ -0.47
LRTOMT-212ENST00000536917 PNPLA6Q8IY17 1366 aa12.11□□□□□ -0.47
LRTOMT-212ENST00000536917 ABCC11Q96J66 1382 aa12.11□□□□□ -0.47
LRTOMT-212ENST00000536917 RAB3GAP2Q9H2M9 1393 aa12.11□□□□□ -0.47
LRTOMT-212ENST00000536917 LRRC59Q96AG4 307 aaKnown RBP12.11□□□□□ -0.47
LRTOMT-212ENST00000536917 SOS2Q07890 1332 aaPredicted RBP12.11□□□□□ -0.47
LRTOMT-212ENST00000536917 ORAI2Q96SN7 254 aa12.1□□□□□ -0.47
LRTOMT-212ENST00000536917 MYOM2P54296 1465 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms