RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 TMEM94Q12767 1356 aa30.16■■■□□ 2.42
TNFRSF1B-204ENST00000536782 HDGFP51858 240 aaKnown RBP30.16■■■□□ 2.42
TNFRSF1B-204ENST00000536782 TMEM131LA2VDJ0 1609 aa30.15■■■□□ 2.42
TNFRSF1B-204ENST00000536782 ZFYVE9O95405 1425 aa30.15■■■□□ 2.42
TNFRSF1B-204ENST00000536782 ITGAEP38570 1179 aa30.15■■■□□ 2.42
TNFRSF1B-204ENST00000536782 PROSER2Q86WR7 435 aaPredicted RBP30.14■■■□□ 2.42
TNFRSF1B-204ENST00000536782 E9PCH4 1651 aa30.14■■■□□ 2.41
TNFRSF1B-204ENST00000536782 PPARGC1BQ86YN6 1023 aaKnown RBP30.13■■■□□ 2.41
TNFRSF1B-204ENST00000536782 CHD2O14647 1828 aaKnown RBP30.12■■■□□ 2.41
TNFRSF1B-204ENST00000536782 PPP1R15AO75807 674 aaPredicted RBP30.12■■■□□ 2.41
TNFRSF1B-204ENST00000536782 FAM135BQ49AJ0 1406 aa30.12■■■□□ 2.41
TNFRSF1B-204ENST00000536782 RIMS2Q9UQ26 1411 aa30.12■■■□□ 2.41
TNFRSF1B-204ENST00000536782 PLEKHG1Q9ULL1 1385 aa30.11■■■□□ 2.41
TNFRSF1B-204ENST00000536782 RBM33Q96EV2 1170 aaKnown RBP30.1■■■□□ 2.41
TNFRSF1B-204ENST00000536782 IQGAP3Q86VI3 1631 aa30.1■■■□□ 2.41
TNFRSF1B-204ENST00000536782 NUP155O75694 1391 aa30.09■■■□□ 2.41
TNFRSF1B-204ENST00000536782 CHGAP10645 457 aaKnown RBP30.09■■■□□ 2.41
TNFRSF1B-204ENST00000536782 NKTRP30414 1462 aaKnown RBP30.09■■■□□ 2.41
TNFRSF1B-204ENST00000536782 ROBO1Q9Y6N7 1651 aa30.09■■■□□ 2.41
TNFRSF1B-204ENST00000536782 PHF23Q9BUL5 403 aaPredicted RBP30.08■■■□□ 2.41
TNFRSF1B-204ENST00000536782 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.07■■■□□ 2.4
TNFRSF1B-204ENST00000536782 RGS17Q9UGC6 210 aaPredicted RBP30.03■■■□□ 2.4
TNFRSF1B-204ENST00000536782 TBX22Q9Y458 520 aa30.01■■■□□ 2.39
TNFRSF1B-204ENST00000536782 MSH6P52701 1360 aa29.99■■■□□ 2.39
TNFRSF1B-204ENST00000536782 NUTM2DQ5VT03 806 aaPredicted RBP29.98■■■□□ 2.39
TNFRSF1B-204ENST00000536782 ADAMTS13Q76LX8 1427 aa29.96■■■□□ 2.39
TNFRSF1B-204ENST00000536782 SLAIN2Q9P270 581 aa29.91■■■□□ 2.38
TNFRSF1B-204ENST00000536782 PHLPP1O60346 1717 aa29.91■■■□□ 2.38
TNFRSF1B-204ENST00000536782 DIP2AQ14689 1571 aa29.9■■■□□ 2.38
TNFRSF1B-204ENST00000536782 PIK3R4Q99570 1358 aa29.9■■■□□ 2.38
TNFRSF1B-204ENST00000536782 RRBP1Q9P2E9 1410 aaKnown RBP29.89■■■□□ 2.38
TNFRSF1B-204ENST00000536782 NCOA3Q9Y6Q9 1424 aa29.89■■■□□ 2.38
TNFRSF1B-204ENST00000536782 SPHKAPQ2M3C7 1700 aa29.86■■■□□ 2.37
TNFRSF1B-204ENST00000536782 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.86■■■□□ 2.37
TNFRSF1B-204ENST00000536782 C14orf37Q86TY3 774 aa29.86■■■□□ 2.37
TNFRSF1B-204ENST00000536782 NRXN3Q9Y4C0 1643 aa29.84■■■□□ 2.37
TNFRSF1B-204ENST00000536782 COL16A1Q07092 1604 aaPredicted RBP29.83■■■□□ 2.37
TNFRSF1B-204ENST00000536782 TRPM2O94759 1503 aa29.83■■■□□ 2.37
TNFRSF1B-204ENST00000536782 PTPRUQ92729 1446 aa29.81■■■□□ 2.36
TNFRSF1B-204ENST00000536782 ZNF326Q5BKZ1 582 aaKnown RBP29.81■■■□□ 2.36
TNFRSF1B-204ENST00000536782 POTEAQ6S8J7 498 aa29.81■■■□□ 2.36
TNFRSF1B-204ENST00000536782 NAIPQ13075 1403 aa29.8■■■□□ 2.36
TNFRSF1B-204ENST00000536782 AMOTL2Q9Y2J4 779 aa29.8■■■□□ 2.36
TNFRSF1B-204ENST00000536782 C19orf44Q9H6X5 657 aa29.79■■■□□ 2.36
TNFRSF1B-204ENST00000536782 CADPS2Q86UW7 1296 aa29.77■■■□□ 2.36
TNFRSF1B-204ENST00000536782 ATF3P18847 181 aa29.76■■■□□ 2.35
TNFRSF1B-204ENST00000536782 XRN1Q8IZH2 1706 aaKnown RBP29.76■■■□□ 2.35
TNFRSF1B-204ENST00000536782 SETBP1Q9Y6X0 1596 aa29.74■■■□□ 2.35
TNFRSF1B-204ENST00000536782 JCADQ9P266 1359 aa29.73■■■□□ 2.35
TNFRSF1B-204ENST00000536782 CLTCL1P53675 1640 aa29.72■■■□□ 2.35
TNFRSF1B-204ENST00000536782 AHDC1Q5TGY3 1603 aaPredicted RBP29.72■■■□□ 2.35
TNFRSF1B-204ENST00000536782 TRIM52Q96A61 297 aa29.7■■■□□ 2.35
TNFRSF1B-204ENST00000536782 HFM1A2PYH4 1435 aa29.69■■■□□ 2.34
TNFRSF1B-204ENST00000536782 LRP6O75581 1613 aa29.67■■■□□ 2.34
TNFRSF1B-204ENST00000536782 SHPRHQ149N8 1683 aa29.66■■■□□ 2.34
TNFRSF1B-204ENST00000536782 NEXMIFQ5QGS0 1516 aa29.66■■■□□ 2.34
TNFRSF1B-204ENST00000536782 METP08581 1390 aa29.66■■■□□ 2.34
TNFRSF1B-204ENST00000536782 KIF1BO60333 1816 aa29.65■■■□□ 2.34
TNFRSF1B-204ENST00000536782 SETD1AO15047 1707 aaKnown RBP29.65■■■□□ 2.34
TNFRSF1B-204ENST00000536782 DCCP43146 1447 aa29.64■■■□□ 2.34
TNFRSF1B-204ENST00000536782 SLC4A1APQ9BWU0 796 aaKnown RBP29.62■■■□□ 2.33
TNFRSF1B-204ENST00000536782 BRINP3Q76B58 766 aa29.6■■■□□ 2.33
TNFRSF1B-204ENST00000536782 SPATA31A6Q5VVP1 1343 aa29.59■■■□□ 2.33
TNFRSF1B-204ENST00000536782 VGFO15240 615 aaPredicted RBP29.58■■■□□ 2.33
TNFRSF1B-204ENST00000536782 NALCNQ8IZF0 1738 aa29.57■■■□□ 2.32
TNFRSF1B-204ENST00000536782 NHSL1Q5SYE7 1610 aa29.57■■■□□ 2.32
TNFRSF1B-204ENST00000536782 MST1RQ04912 1400 aa29.57■■■□□ 2.32
TNFRSF1B-204ENST00000536782 ASXL1Q8IXJ9 1541 aa29.56■■■□□ 2.32
TNFRSF1B-204ENST00000536782 RPGRIP1LQ68CZ1 1315 aa29.54■■■□□ 2.32
TNFRSF1B-204ENST00000536782 ADGRL3Q9HAR2 1447 aa29.54■■■□□ 2.32
TNFRSF1B-204ENST00000536782 MEX3CQ5U5Q3 659 aaKnown RBP29.51■■■□□ 2.31
TNFRSF1B-204ENST00000536782 SETD5Q9C0A6 1442 aa29.47■■■□□ 2.31
TNFRSF1B-204ENST00000536782 PPLO60437 1756 aa29.47■■■□□ 2.31
TNFRSF1B-204ENST00000536782 PTCH1Q13635 1447 aa29.45■■■□□ 2.31
TNFRSF1B-204ENST00000536782 FOXD1Q16676 465 aa29.45■■■□□ 2.31
TNFRSF1B-204ENST00000536782 ZNF772Q68DY9 489 aaPredicted RBP29.43■■■□□ 2.3
TNFRSF1B-204ENST00000536782 ROBO2Q9HCK4 1378 aa29.42■■■□□ 2.3
TNFRSF1B-204ENST00000536782 LRRC59Q96AG4 307 aaKnown RBP29.42■■■□□ 2.3
TNFRSF1B-204ENST00000536782 NUTM2BA6NNL0 878 aaPredicted RBP29.41■■■□□ 2.3
TNFRSF1B-204ENST00000536782 NUTM2EB1AL46 878 aaPredicted RBP29.41■■■□□ 2.3
TNFRSF1B-204ENST00000536782 NUTM2AQ8IVF1 878 aaPredicted RBP29.41■■■□□ 2.3
TNFRSF1B-204ENST00000536782 DDX17Q92841 729 aaKnown RBP29.41■■■□□ 2.3
TNFRSF1B-204ENST00000536782 LAMC1P11047 1609 aa29.41■■■□□ 2.3
TNFRSF1B-204ENST00000536782 CCDC144AA2RUR9 1427 aa29.4■■■□□ 2.3
TNFRSF1B-204ENST00000536782 PRAG1Q86YV5 1406 aa29.39■■■□□ 2.3
TNFRSF1B-204ENST00000536782 MPHOSPH9Q99550 1183 aa29.38■■■□□ 2.29
TNFRSF1B-204ENST00000536782 C1orf167Q5SNV9 1468 aa29.37■■■□□ 2.29
TNFRSF1B-204ENST00000536782 PNPLA6Q8IY17 1366 aa29.35■■■□□ 2.29
TNFRSF1B-204ENST00000536782 RGL3Q3MIN7 710 aa29.34■■■□□ 2.29
TNFRSF1B-204ENST00000536782 ADGRF5Q8IZF2 1346 aa29.32■■■□□ 2.28
TNFRSF1B-204ENST00000536782 SPATA31E1Q6ZUB1 1445 aa29.31■■■□□ 2.28
TNFRSF1B-204ENST00000536782 AFF2P51816 1311 aa29.31■■■□□ 2.28
TNFRSF1B-204ENST00000536782 ANKRD30BQ9BXX2 1392 aa29.3■■■□□ 2.28
TNFRSF1B-204ENST00000536782 ORAI2Q96SN7 254 aa29.3■■■□□ 2.28
TNFRSF1B-204ENST00000536782 IFT172Q9UG01 1749 aa29.29■■■□□ 2.28
TNFRSF1B-204ENST00000536782 ACIN1Q9UKV3 1341 aaKnown RBP29.29■■■□□ 2.28
TNFRSF1B-204ENST00000536782 RXRBP28702 533 aa29.27■■■□□ 2.28
TNFRSF1B-204ENST00000536782 UPF1Q92900 1129 aaKnown RBP eCLIP29.27■■■□□ 2.28
TNFRSF1B-204ENST00000536782 CDK12Q9NYV4 1490 aaPredicted RBP29.27■■■□□ 2.28
TNFRSF1B-204ENST00000536782 SOS2Q07890 1332 aaPredicted RBP29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms