RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 CLTCL1P53675 1640 aa26.85■■□□□ 1.89
TNFRSF1A-209ENST00000536717 TRPM2O94759 1503 aa26.84■■□□□ 1.89
TNFRSF1A-209ENST00000536717 SLC26A8Q96RN1 970 aa26.84■■□□□ 1.89
TNFRSF1A-209ENST00000536717 PLEKHG1Q9ULL1 1385 aa26.83■■□□□ 1.89
TNFRSF1A-209ENST00000536717 KIF1BO60333 1816 aa26.82■■□□□ 1.88
TNFRSF1A-209ENST00000536717 HDGFP51858 240 aaKnown RBP26.81■■□□□ 1.88
TNFRSF1A-209ENST00000536717 ALKQ9UM73 1620 aa26.81■■□□□ 1.88
TNFRSF1A-209ENST00000536717 CHD2O14647 1828 aaKnown RBP26.79■■□□□ 1.88
TNFRSF1A-209ENST00000536717 PPP1R15AO75807 674 aaPredicted RBP26.79■■□□□ 1.88
TNFRSF1A-209ENST00000536717 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.79■■□□□ 1.88
TNFRSF1A-209ENST00000536717 SENP3Q9H4L4 574 aaPredicted RBP26.79■■□□□ 1.88
TNFRSF1A-209ENST00000536717 NWD1Q149M9 1564 aa26.78■■□□□ 1.88
TNFRSF1A-209ENST00000536717 NUTM2DQ5VT03 806 aaPredicted RBP26.78■■□□□ 1.88
TNFRSF1A-209ENST00000536717 SLC4A1APQ9BWU0 796 aaKnown RBP26.78■■□□□ 1.88
TNFRSF1A-209ENST00000536717 BCANQ96GW7 911 aa26.77■■□□□ 1.88
TNFRSF1A-209ENST00000536717 TOM1O60784 492 aa26.76■■□□□ 1.87
TNFRSF1A-209ENST00000536717 KCNA6P17658 529 aa26.75■■□□□ 1.87
TNFRSF1A-209ENST00000536717 ADAMTS13Q76LX8 1427 aa26.74■■□□□ 1.87
TNFRSF1A-209ENST00000536717 DIP2AQ14689 1571 aa26.71■■□□□ 1.87
TNFRSF1A-209ENST00000536717 NRXN3Q9Y4C0 1643 aa26.71■■□□□ 1.87
TNFRSF1A-209ENST00000536717 TBX22Q9Y458 520 aa26.7■■□□□ 1.87
TNFRSF1A-209ENST00000536717 NKTRP30414 1462 aaKnown RBP26.7■■□□□ 1.87
TNFRSF1A-209ENST00000536717 PIP4K2BP78356 416 aa26.7■■□□□ 1.86
TNFRSF1A-209ENST00000536717 NEXMIFQ5QGS0 1516 aa26.7■■□□□ 1.86
TNFRSF1A-209ENST00000536717 SETD5Q9C0A6 1442 aa26.69■■□□□ 1.86
TNFRSF1A-209ENST00000536717 ZNF326Q5BKZ1 582 aaKnown RBP26.68■■□□□ 1.86
TNFRSF1A-209ENST00000536717 SCAF1Q9H7N4 1312 aaKnown RBP26.68■■□□□ 1.86
TNFRSF1A-209ENST00000536717 TMEM94Q12767 1356 aa26.68■■□□□ 1.86
TNFRSF1A-209ENST00000536717 FOXD1Q16676 465 aa26.67■■□□□ 1.86
TNFRSF1A-209ENST00000536717 SETBP1Q9Y6X0 1596 aa26.66■■□□□ 1.86
TNFRSF1A-209ENST00000536717 MPHOSPH9Q99550 1183 aa26.65■■□□□ 1.86
TNFRSF1A-209ENST00000536717 PROSER2Q86WR7 435 aaPredicted RBP26.65■■□□□ 1.86
TNFRSF1A-209ENST00000536717 RBM33Q96EV2 1170 aaKnown RBP26.63■■□□□ 1.85
TNFRSF1A-209ENST00000536717 PIK3R4Q99570 1358 aa26.62■■□□□ 1.85
TNFRSF1A-209ENST00000536717 PPLO60437 1756 aa26.61■■□□□ 1.85
TNFRSF1A-209ENST00000536717 RAB3GAP2Q9H2M9 1393 aa26.61■■□□□ 1.85
TNFRSF1A-209ENST00000536717 HSPA1LP34931 641 aa26.6■■□□□ 1.85
TNFRSF1A-209ENST00000536717 ACIN1Q9UKV3 1341 aaKnown RBP26.59■■□□□ 1.85
TNFRSF1A-209ENST00000536717 PTPRUQ92729 1446 aa26.58■■□□□ 1.85
TNFRSF1A-209ENST00000536717 XRN1Q8IZH2 1706 aaKnown RBP26.56■■□□□ 1.84
TNFRSF1A-209ENST00000536717 CCDC144AA2RUR9 1427 aa26.56■■□□□ 1.84
TNFRSF1A-209ENST00000536717 SETD1AO15047 1707 aaKnown RBP26.54■■□□□ 1.84
TNFRSF1A-209ENST00000536717 RPGRIP1LQ68CZ1 1315 aa26.52■■□□□ 1.84
TNFRSF1A-209ENST00000536717 METP08581 1390 aa26.52■■□□□ 1.84
TNFRSF1A-209ENST00000536717 AMOTL2Q9Y2J4 779 aa26.52■■□□□ 1.84
TNFRSF1A-209ENST00000536717 IFT172Q9UG01 1749 aa26.52■■□□□ 1.84
TNFRSF1A-209ENST00000536717 MSH6P52701 1360 aa26.51■■□□□ 1.83
TNFRSF1A-209ENST00000536717 SPATA31E1Q6ZUB1 1445 aa26.5■■□□□ 1.83
TNFRSF1A-209ENST00000536717 NCOA3Q9Y6Q9 1424 aa26.5■■□□□ 1.83
TNFRSF1A-209ENST00000536717 VGFO15240 615 aaPredicted RBP26.49■■□□□ 1.83
TNFRSF1A-209ENST00000536717 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.49■■□□□ 1.83
TNFRSF1A-209ENST00000536717 ROBO1Q9Y6N7 1651 aa26.48■■□□□ 1.83
TNFRSF1A-209ENST00000536717 FAM135BQ49AJ0 1406 aa26.47■■□□□ 1.83
TNFRSF1A-209ENST00000536717 DISP3Q9P2K9 1392 aa26.44■■□□□ 1.82
TNFRSF1A-209ENST00000536717 RGL3Q3MIN7 710 aa26.43■■□□□ 1.82
TNFRSF1A-209ENST00000536717 HRCP23327 699 aa26.42■■□□□ 1.82
TNFRSF1A-209ENST00000536717 C14orf37Q86TY3 774 aa26.4■■□□□ 1.82
TNFRSF1A-209ENST00000536717 C19orf44Q9H6X5 657 aa26.39■■□□□ 1.82
TNFRSF1A-209ENST00000536717 SLAIN2Q9P270 581 aa26.39■■□□□ 1.82
TNFRSF1A-209ENST00000536717 ADGRF5Q8IZF2 1346 aa26.39■■□□□ 1.81
TNFRSF1A-209ENST00000536717 ANKRD30BQ9BXX2 1392 aa26.37■■□□□ 1.81
TNFRSF1A-209ENST00000536717 MED1Q15648 1581 aaPredicted RBP26.37■■□□□ 1.81
TNFRSF1A-209ENST00000536717 NALCNQ8IZF0 1738 aa26.36■■□□□ 1.81
TNFRSF1A-209ENST00000536717 CADPS2Q86UW7 1296 aa26.34■■□□□ 1.81
TNFRSF1A-209ENST00000536717 DCCP43146 1447 aa26.33■■□□□ 1.81
TNFRSF1A-209ENST00000536717 PTCH1Q13635 1447 aa26.33■■□□□ 1.81
TNFRSF1A-209ENST00000536717 PRAG1Q86YV5 1406 aa26.33■■□□□ 1.81
TNFRSF1A-209ENST00000536717 ATF3P18847 181 aa26.32■■□□□ 1.8
TNFRSF1A-209ENST00000536717 PHLPP1O60346 1717 aa26.32■■□□□ 1.8
TNFRSF1A-209ENST00000536717 PIK3C2GO75747 1445 aa26.32■■□□□ 1.8
TNFRSF1A-209ENST00000536717 ADGRL3Q9HAR2 1447 aa26.31■■□□□ 1.8
TNFRSF1A-209ENST00000536717 ROBO2Q9HCK4 1378 aa26.3■■□□□ 1.8
TNFRSF1A-209ENST00000536717 TRIM26Q12899 539 aaPredicted RBP26.29■■□□□ 1.8
TNFRSF1A-209ENST00000536717 ASXL1Q8IXJ9 1541 aa26.28■■□□□ 1.8
TNFRSF1A-209ENST00000536717 MYOM2P54296 1465 aa26.27■■□□□ 1.8
TNFRSF1A-209ENST00000536717 NRXN1Q9ULB1 1477 aa26.27■■□□□ 1.8
TNFRSF1A-209ENST00000536717 ILDR2Q71H61 639 aa26.26■■□□□ 1.79
TNFRSF1A-209ENST00000536717 MST1RQ04912 1400 aa26.26■■□□□ 1.79
TNFRSF1A-209ENST00000536717 COL16A1Q07092 1604 aaPredicted RBP26.25■■□□□ 1.79
TNFRSF1A-209ENST00000536717 KNDC1Q76NI1 1749 aa26.24■■□□□ 1.79
TNFRSF1A-209ENST00000536717 AHDC1Q5TGY3 1603 aaPredicted RBP26.23■■□□□ 1.79
TNFRSF1A-209ENST00000536717 LAMC1P11047 1609 aa26.22■■□□□ 1.79
TNFRSF1A-209ENST00000536717 TECPR2O15040 1411 aa26.21■■□□□ 1.79
TNFRSF1A-209ENST00000536717 TMEM132EQ6IEE7 984 aa26.2■■□□□ 1.79
TNFRSF1A-209ENST00000536717 BRINP3Q76B58 766 aa26.2■■□□□ 1.79
TNFRSF1A-209ENST00000536717 LRPPRCP42704 1394 aaKnown RBP26.2■■□□□ 1.78
TNFRSF1A-209ENST00000536717 C14orf93Q9H972 538 aaKnown RBP26.19■■□□□ 1.78
TNFRSF1A-209ENST00000536717 NHSL1Q5SYE7 1610 aa26.18■■□□□ 1.78
TNFRSF1A-209ENST00000536717 ABCC11Q96J66 1382 aa26.17■■□□□ 1.78
TNFRSF1A-209ENST00000536717 STK26Q9P289 416 aa26.16■■□□□ 1.78
TNFRSF1A-209ENST00000536717 YTHDC2Q9H6S0 1430 aaKnown RBP26.16■■□□□ 1.78
TNFRSF1A-209ENST00000536717 CFAP70Q5T0N1 1121 aa26.15■■□□□ 1.78
TNFRSF1A-209ENST00000536717 JCADQ9P266 1359 aa26.13■■□□□ 1.77
TNFRSF1A-209ENST00000536717 C1orf167Q5SNV9 1468 aa26.13■■□□□ 1.77
TNFRSF1A-209ENST00000536717 CDC42BPGQ6DT37 1551 aa26.13■■□□□ 1.77
TNFRSF1A-209ENST00000536717 WAPLQ7Z5K2 1190 aa26.12■■□□□ 1.77
TNFRSF1A-209ENST00000536717 DHX57Q6P158 1386 aaKnown RBP26.12■■□□□ 1.77
TNFRSF1A-209ENST00000536717 SHPRHQ149N8 1683 aa26.11■■□□□ 1.77
TNFRSF1A-209ENST00000536717 PLEKHH1Q9ULM0 1364 aa26.11■■□□□ 1.77
TNFRSF1A-209ENST00000536717 DCAF11Q8TEB1 546 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms