RNA–Protein interactions for RNA: ENST00000535683.1

LINC00900-204, long intergenic non-protein coding RNA 900, humanhuman

TSL 3

Gene LINC00900, Length 504 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00900-204ENST00000535683 BCANQ96GW7 911 aa30.06■■■□□ 2.4
LINC00900-204ENST00000535683 PLEKHG1Q9ULL1 1385 aa30.04■■■□□ 2.4
LINC00900-204ENST00000535683 UNC13BO14795 1591 aa30.04■■■□□ 2.4
LINC00900-204ENST00000535683 NWD1Q149M9 1564 aa30.04■■■□□ 2.4
LINC00900-204ENST00000535683 GCC2Q8IWJ2 1684 aa30.04■■■□□ 2.4
LINC00900-204ENST00000535683 ZFYVE9O95405 1425 aa30.04■■■□□ 2.4
LINC00900-204ENST00000535683 PPP1R15AO75807 674 aaPredicted RBP30.03■■■□□ 2.4
LINC00900-204ENST00000535683 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.03■■■□□ 2.4
LINC00900-204ENST00000535683 SENP3Q9H4L4 574 aaPredicted RBP30.02■■■□□ 2.4
LINC00900-204ENST00000535683 RIMS2Q9UQ26 1411 aa30■■■□□ 2.39
LINC00900-204ENST00000535683 MSH6P52701 1360 aa29.99■■■□□ 2.39
LINC00900-204ENST00000535683 TMEM131LA2VDJ0 1609 aa29.97■■■□□ 2.39
LINC00900-204ENST00000535683 TBX22Q9Y458 520 aa29.96■■■□□ 2.39
LINC00900-204ENST00000535683 NCOA3Q9Y6Q9 1424 aa29.95■■■□□ 2.38
LINC00900-204ENST00000535683 IQGAP3Q86VI3 1631 aa29.93■■■□□ 2.38
LINC00900-204ENST00000535683 CHGAP10645 457 aaKnown RBP29.9■■■□□ 2.38
LINC00900-204ENST00000535683 ROBO1Q9Y6N7 1651 aa29.9■■■□□ 2.38
LINC00900-204ENST00000535683 NUP155O75694 1391 aa29.9■■■□□ 2.38
LINC00900-204ENST00000535683 PIK3R4Q99570 1358 aa29.9■■■□□ 2.38
LINC00900-204ENST00000535683 E9PCH4 1651 aa29.89■■■□□ 2.38
LINC00900-204ENST00000535683 DIP2AQ14689 1571 aa29.89■■■□□ 2.38
LINC00900-204ENST00000535683 CHD2O14647 1828 aaKnown RBP29.88■■■□□ 2.37
LINC00900-204ENST00000535683 SLAIN2Q9P270 581 aa29.88■■■□□ 2.37
LINC00900-204ENST00000535683 MYO5BQ9ULV0 1848 aa29.87■■■□□ 2.37
LINC00900-204ENST00000535683 RBM33Q96EV2 1170 aaKnown RBP29.86■■■□□ 2.37
LINC00900-204ENST00000535683 ADAMTS13Q76LX8 1427 aa29.81■■■□□ 2.36
LINC00900-204ENST00000535683 ITGAEP38570 1179 aa29.79■■■□□ 2.36
LINC00900-204ENST00000535683 RGS17Q9UGC6 210 aaPredicted RBP29.79■■■□□ 2.36
LINC00900-204ENST00000535683 C14orf37Q86TY3 774 aa29.78■■■□□ 2.36
LINC00900-204ENST00000535683 CADPS2Q86UW7 1296 aa29.78■■■□□ 2.36
LINC00900-204ENST00000535683 C19orf44Q9H6X5 657 aa29.77■■■□□ 2.36
LINC00900-204ENST00000535683 JCADQ9P266 1359 aa29.77■■■□□ 2.36
LINC00900-204ENST00000535683 TRPM2O94759 1503 aa29.76■■■□□ 2.36
LINC00900-204ENST00000535683 ATF3P18847 181 aa29.73■■■□□ 2.35
LINC00900-204ENST00000535683 NUTM2DQ5VT03 806 aaPredicted RBP29.73■■■□□ 2.35
LINC00900-204ENST00000535683 PHLPP1O60346 1717 aa29.72■■■□□ 2.35
LINC00900-204ENST00000535683 AMOTL2Q9Y2J4 779 aa29.69■■■□□ 2.34
LINC00900-204ENST00000535683 DCCP43146 1447 aa29.67■■■□□ 2.34
LINC00900-204ENST00000535683 SPHKAPQ2M3C7 1700 aa29.67■■■□□ 2.34
LINC00900-204ENST00000535683 SETBP1Q9Y6X0 1596 aa29.66■■■□□ 2.34
LINC00900-204ENST00000535683 SPATA31A6Q5VVP1 1343 aa29.66■■■□□ 2.34
LINC00900-204ENST00000535683 ZNF326Q5BKZ1 582 aaKnown RBP29.65■■■□□ 2.34
LINC00900-204ENST00000535683 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.64■■■□□ 2.34
LINC00900-204ENST00000535683 RRBP1Q9P2E9 1410 aaKnown RBP29.63■■■□□ 2.33
LINC00900-204ENST00000535683 POTEAQ6S8J7 498 aa29.63■■■□□ 2.33
LINC00900-204ENST00000535683 COL16A1Q07092 1604 aaPredicted RBP29.63■■■□□ 2.33
LINC00900-204ENST00000535683 AHDC1Q5TGY3 1603 aaPredicted RBP29.62■■■□□ 2.33
LINC00900-204ENST00000535683 PTPRUQ92729 1446 aa29.61■■■□□ 2.33
LINC00900-204ENST00000535683 PPARGC1BQ86YN6 1023 aaKnown RBP29.6■■■□□ 2.33
LINC00900-204ENST00000535683 XRN1Q8IZH2 1706 aaKnown RBP29.57■■■□□ 2.32
LINC00900-204ENST00000535683 NRXN3Q9Y4C0 1643 aa29.56■■■□□ 2.32
LINC00900-204ENST00000535683 NAIPQ13075 1403 aa29.55■■■□□ 2.32
LINC00900-204ENST00000535683 BRINP3Q76B58 766 aa29.54■■■□□ 2.32
LINC00900-204ENST00000535683 MEX3CQ5U5Q3 659 aaKnown RBP29.52■■■□□ 2.32
LINC00900-204ENST00000535683 ZNF772Q68DY9 489 aaPredicted RBP29.52■■■□□ 2.32
LINC00900-204ENST00000535683 SHPRHQ149N8 1683 aa29.51■■■□□ 2.31
LINC00900-204ENST00000535683 METP08581 1390 aa29.51■■■□□ 2.31
LINC00900-204ENST00000535683 NEXMIFQ5QGS0 1516 aa29.5■■■□□ 2.31
LINC00900-204ENST00000535683 CLTCL1P53675 1640 aa29.5■■■□□ 2.31
LINC00900-204ENST00000535683 VGFO15240 615 aaPredicted RBP29.49■■■□□ 2.31
LINC00900-204ENST00000535683 HFM1A2PYH4 1435 aa29.47■■■□□ 2.31
LINC00900-204ENST00000535683 ADGRL3Q9HAR2 1447 aa29.47■■■□□ 2.31
LINC00900-204ENST00000535683 KIF1BO60333 1816 aa29.47■■■□□ 2.31
LINC00900-204ENST00000535683 RPGRIP1LQ68CZ1 1315 aa29.46■■■□□ 2.31
LINC00900-204ENST00000535683 MST1RQ04912 1400 aa29.46■■■□□ 2.31
LINC00900-204ENST00000535683 ASXL1Q8IXJ9 1541 aa29.46■■■□□ 2.31
LINC00900-204ENST00000535683 LRP6O75581 1613 aa29.45■■■□□ 2.31
LINC00900-204ENST00000535683 SETD5Q9C0A6 1442 aa29.45■■■□□ 2.3
LINC00900-204ENST00000535683 TRIM52Q96A61 297 aa29.43■■■□□ 2.3
LINC00900-204ENST00000535683 LRRC59Q96AG4 307 aaKnown RBP29.42■■■□□ 2.3
LINC00900-204ENST00000535683 PTCH1Q13635 1447 aa29.41■■■□□ 2.3
LINC00900-204ENST00000535683 SLC4A1APQ9BWU0 796 aaKnown RBP29.39■■■□□ 2.3
LINC00900-204ENST00000535683 PRAG1Q86YV5 1406 aa29.37■■■□□ 2.29
LINC00900-204ENST00000535683 NHSL1Q5SYE7 1610 aa29.37■■■□□ 2.29
LINC00900-204ENST00000535683 NUTM2BA6NNL0 878 aaPredicted RBP29.32■■■□□ 2.28
LINC00900-204ENST00000535683 NUTM2EB1AL46 878 aaPredicted RBP29.32■■■□□ 2.28
LINC00900-204ENST00000535683 NUTM2AQ8IVF1 878 aaPredicted RBP29.32■■■□□ 2.28
LINC00900-204ENST00000535683 NALCNQ8IZF0 1738 aa29.31■■■□□ 2.28
LINC00900-204ENST00000535683 RXRBP28702 533 aa29.31■■■□□ 2.28
LINC00900-204ENST00000535683 C1orf167Q5SNV9 1468 aa29.3■■■□□ 2.28
LINC00900-204ENST00000535683 CDK12Q9NYV4 1490 aaPredicted RBP29.29■■■□□ 2.28
LINC00900-204ENST00000535683 ROBO2Q9HCK4 1378 aa29.27■■■□□ 2.28
LINC00900-204ENST00000535683 SETD1AO15047 1707 aaKnown RBP29.27■■■□□ 2.28
LINC00900-204ENST00000535683 PNPLA6Q8IY17 1366 aa29.26■■■□□ 2.28
LINC00900-204ENST00000535683 ACIN1Q9UKV3 1341 aaKnown RBP29.26■■■□□ 2.27
LINC00900-204ENST00000535683 AFF2P51816 1311 aa29.25■■■□□ 2.27
LINC00900-204ENST00000535683 LAMC1P11047 1609 aa29.24■■■□□ 2.27
LINC00900-204ENST00000535683 CCDC144AA2RUR9 1427 aa29.23■■■□□ 2.27
LINC00900-204ENST00000535683 PPLO60437 1756 aa29.23■■■□□ 2.27
LINC00900-204ENST00000535683 SOS2Q07890 1332 aaPredicted RBP29.2■■■□□ 2.27
LINC00900-204ENST00000535683 ANKRD30BQ9BXX2 1392 aa29.2■■■□□ 2.26
LINC00900-204ENST00000535683 DDX17Q92841 729 aaKnown RBP29.19■■■□□ 2.26
LINC00900-204ENST00000535683 UPF1Q92900 1129 aaKnown RBP eCLIP29.18■■■□□ 2.26
LINC00900-204ENST00000535683 C8orf37Q96NL8 207 aa29.18■■■□□ 2.26
LINC00900-204ENST00000535683 ORAI2Q96SN7 254 aa29.16■■■□□ 2.26
LINC00900-204ENST00000535683 RBM6P78332 1123 aaKnown RBP29.15■■■□□ 2.26
LINC00900-204ENST00000535683 CDC42BPGQ6DT37 1551 aa29.14■■■□□ 2.26
LINC00900-204ENST00000535683 NGLY1Q96IV0 654 aa29.13■■■□□ 2.25
LINC00900-204ENST00000535683 QTRT2Q9H974 415 aaKnown RBP29.13■■■□□ 2.25
LINC00900-204ENST00000535683 NPHP3Q7Z494 1330 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms