RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 MYO5BQ9ULV0 1848 aa32.27■■■□□ 2.76
SSPN-204ENST00000535504 ZNF335Q9H4Z2 1342 aaPredicted RBP32.25■■■□□ 2.75
SSPN-204ENST00000535504 KIF1BO60333 1816 aa32.23■■■□□ 2.75
SSPN-204ENST00000535504 CLTCL1P53675 1640 aa32.22■■■□□ 2.75
SSPN-204ENST00000535504 CCDC144AA2RUR9 1427 aa32.21■■■□□ 2.75
SSPN-204ENST00000535504 FOXD1Q16676 465 aa32.21■■■□□ 2.75
SSPN-204ENST00000535504 ZFYVE9O95405 1425 aa32.18■■■□□ 2.74
SSPN-204ENST00000535504 PLEKHG1Q9ULL1 1385 aa32.16■■■□□ 2.74
SSPN-204ENST00000535504 LTBP4Q8N2S1 1624 aa32.15■■■□□ 2.74
SSPN-204ENST00000535504 CPS1P31327 1500 aa32.15■■■□□ 2.74
SSPN-204ENST00000535504 TRIM26Q12899 539 aaPredicted RBP32.13■■■□□ 2.73
SSPN-204ENST00000535504 NUTM2DQ5VT03 806 aaPredicted RBP32.12■■■□□ 2.73
SSPN-204ENST00000535504 FBXO41Q8TF61 875 aa32.11■■■□□ 2.73
SSPN-204ENST00000535504 IQSEC2Q5JU85 1478 aa32.1■■■□□ 2.73
SSPN-204ENST00000535504 SLC26A8Q96RN1 970 aa32.09■■■□□ 2.73
SSPN-204ENST00000535504 RPGRIP1LQ68CZ1 1315 aa32.08■■■□□ 2.73
SSPN-204ENST00000535504 SENP3Q9H4L4 574 aaPredicted RBP32.07■■■□□ 2.72
SSPN-204ENST00000535504 VGFO15240 615 aaPredicted RBP32.05■■■□□ 2.72
SSPN-204ENST00000535504 DIP2AQ14689 1571 aa32.02■■■□□ 2.72
SSPN-204ENST00000535504 TBX22Q9Y458 520 aa32.01■■■□□ 2.71
SSPN-204ENST00000535504 NEXMIFQ5QGS0 1516 aa32■■■□□ 2.71
SSPN-204ENST00000535504 KCNA6P17658 529 aa31.99■■■□□ 2.71
SSPN-204ENST00000535504 RGL3Q3MIN7 710 aa31.99■■■□□ 2.71
SSPN-204ENST00000535504 ILDR1Q86SU0 546 aaPredicted RBP31.97■■■□□ 2.71
SSPN-204ENST00000535504 PIK3R4Q99570 1358 aa31.94■■■□□ 2.7
SSPN-204ENST00000535504 ANKRD30BQ9BXX2 1392 aa31.93■■■□□ 2.7
SSPN-204ENST00000535504 SETBP1Q9Y6X0 1596 aa31.92■■■□□ 2.7
SSPN-204ENST00000535504 SPATA31E1Q6ZUB1 1445 aa31.91■■■□□ 2.7
SSPN-204ENST00000535504 ADAMTS13Q76LX8 1427 aa31.91■■■□□ 2.7
SSPN-204ENST00000535504 UBAP1LF5GYI3 381 aa31.9■■■□□ 2.7
SSPN-204ENST00000535504 NKTRP30414 1462 aaKnown RBP31.9■■■□□ 2.7
SSPN-204ENST00000535504 STRCP1A6NGW2 1772 aa31.89■■■□□ 2.7
SSPN-204ENST00000535504 PPLO60437 1756 aa31.89■■■□□ 2.7
SSPN-204ENST00000535504 PROSER2Q86WR7 435 aaPredicted RBP31.89■■■□□ 2.7
SSPN-204ENST00000535504 LRRC7Q96NW7 1537 aa31.89■■■□□ 2.7
SSPN-204ENST00000535504 TOM1O60784 492 aa31.88■■■□□ 2.69
SSPN-204ENST00000535504 NWD1Q149M9 1564 aa31.86■■■□□ 2.69
SSPN-204ENST00000535504 CHD2O14647 1828 aaKnown RBP31.84■■■□□ 2.69
SSPN-204ENST00000535504 NRXN3Q9Y4C0 1643 aa31.81■■■□□ 2.68
SSPN-204ENST00000535504 TMEM94Q12767 1356 aa31.8■■■□□ 2.68
SSPN-204ENST00000535504 SCAF1Q9H7N4 1312 aaKnown RBP31.79■■■□□ 2.68
SSPN-204ENST00000535504 C14orf37Q86TY3 774 aa31.79■■■□□ 2.68
SSPN-204ENST00000535504 AMOTL2Q9Y2J4 779 aa31.79■■■□□ 2.68
SSPN-204ENST00000535504 IFT172Q9UG01 1749 aa31.77■■■□□ 2.68
SSPN-204ENST00000535504 ADGRF5Q8IZF2 1346 aa31.75■■■□□ 2.67
SSPN-204ENST00000535504 MSH6P52701 1360 aa31.74■■■□□ 2.67
SSPN-204ENST00000535504 STAC3Q96MF2 364 aa31.74■■■□□ 2.67
SSPN-204ENST00000535504 METP08581 1390 aa31.73■■■□□ 2.67
SSPN-204ENST00000535504 ALKQ9UM73 1620 aa31.73■■■□□ 2.67
SSPN-204ENST00000535504 MYOM2P54296 1465 aa31.72■■■□□ 2.67
SSPN-204ENST00000535504 PIP4K2BP78356 416 aa31.71■■■□□ 2.67
SSPN-204ENST00000535504 NCOA3Q9Y6Q9 1424 aa31.71■■■□□ 2.67
SSPN-204ENST00000535504 DCAF11Q8TEB1 546 aa31.69■■■□□ 2.66
SSPN-204ENST00000535504 PTPRUQ92729 1446 aa31.68■■■□□ 2.66
SSPN-204ENST00000535504 RBM33Q96EV2 1170 aaKnown RBP31.68■■■□□ 2.66
SSPN-204ENST00000535504 PIK3C2GO75747 1445 aa31.67■■■□□ 2.66
SSPN-204ENST00000535504 KDM2AQ9Y2K7 1162 aa31.67■■■□□ 2.66
SSPN-204ENST00000535504 XIRP1Q702N8 1843 aaKnown RBP31.66■■■□□ 2.66
SSPN-204ENST00000535504 XRN1Q8IZH2 1706 aaKnown RBP31.66■■■□□ 2.66
SSPN-204ENST00000535504 DHX57Q6P158 1386 aaKnown RBP31.63■■■□□ 2.65
SSPN-204ENST00000535504 LAMC1P11047 1609 aa31.63■■■□□ 2.65
SSPN-204ENST00000535504 SETD1AO15047 1707 aaKnown RBP31.62■■■□□ 2.65
SSPN-204ENST00000535504 ATF3P18847 181 aa31.61■■■□□ 2.65
SSPN-204ENST00000535504 C19orf44Q9H6X5 657 aa31.6■■■□□ 2.65
SSPN-204ENST00000535504 NRXN1Q9ULB1 1477 aa31.59■■■□□ 2.65
SSPN-204ENST00000535504 PCGF6Q9BYE7 350 aa31.59■■■□□ 2.65
SSPN-204ENST00000535504 PTCH1Q13635 1447 aa31.58■■■□□ 2.65
SSPN-204ENST00000535504 CADPS2Q86UW7 1296 aa31.58■■■□□ 2.65
SSPN-204ENST00000535504 C14orf93Q9H972 538 aaKnown RBP31.58■■■□□ 2.65
SSPN-204ENST00000535504 NEUROD1Q13562 356 aa31.56■■■□□ 2.64
SSPN-204ENST00000535504 STK26Q9P289 416 aa31.55■■■□□ 2.64
SSPN-204ENST00000535504 CFAP70Q5T0N1 1121 aa31.54■■■□□ 2.64
SSPN-204ENST00000535504 LRPPRCP42704 1394 aaKnown RBP31.54■■■□□ 2.64
SSPN-204ENST00000535504 TMEM132EQ6IEE7 984 aa31.52■■■□□ 2.64
SSPN-204ENST00000535504 PRAG1Q86YV5 1406 aa31.51■■■□□ 2.64
SSPN-204ENST00000535504 DCCP43146 1447 aa31.5■■■□□ 2.63
SSPN-204ENST00000535504 SIN3AQ96ST3 1273 aa31.5■■■□□ 2.63
SSPN-204ENST00000535504 YTHDC2Q9H6S0 1430 aaKnown RBP31.49■■■□□ 2.63
SSPN-204ENST00000535504 SLAIN2Q9P270 581 aa31.49■■■□□ 2.63
SSPN-204ENST00000535504 ADGRL3Q9HAR2 1447 aa31.49■■■□□ 2.63
SSPN-204ENST00000535504 ABCC11Q96J66 1382 aa31.48■■■□□ 2.63
SSPN-204ENST00000535504 ROBO2Q9HCK4 1378 aa31.48■■■□□ 2.63
SSPN-204ENST00000535504 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.48■■■□□ 2.63
SSPN-204ENST00000535504 TECPR2O15040 1411 aa31.45■■■□□ 2.63
SSPN-204ENST00000535504 FAM135BQ49AJ0 1406 aa31.45■■■□□ 2.63
SSPN-204ENST00000535504 KNDC1Q76NI1 1749 aa31.45■■■□□ 2.63
SSPN-204ENST00000535504 ASXL1Q8IXJ9 1541 aa31.43■■■□□ 2.62
SSPN-204ENST00000535504 HSPA1LP34931 641 aa31.41■■■□□ 2.62
SSPN-204ENST00000535504 L3MBTL2Q969R5 705 aa31.41■■■□□ 2.62
SSPN-204ENST00000535504 TONSLQ96HA7 1378 aa31.41■■■□□ 2.62
SSPN-204ENST00000535504 SIRT1Q96EB6 747 aa31.4■■■□□ 2.62
SSPN-204ENST00000535504 POGKQ9P215 609 aa31.4■■■□□ 2.62
SSPN-204ENST00000535504 NALCNQ8IZF0 1738 aa31.38■■■□□ 2.61
SSPN-204ENST00000535504 ROBO1Q9Y6N7 1651 aa31.38■■■□□ 2.61
SSPN-204ENST00000535504 WAPLQ7Z5K2 1190 aa31.35■■■□□ 2.61
SSPN-204ENST00000535504 TRAK1Q9UPV9 953 aa31.34■■■□□ 2.61
SSPN-204ENST00000535504 KIAA1210Q9ULL0 1709 aa31.34■■■□□ 2.61
SSPN-204ENST00000535504 ADGRB1O14514 1584 aa31.33■■■□□ 2.61
SSPN-204ENST00000535504 DLC1Q96QB1 1528 aa31.33■■■□□ 2.61
SSPN-204ENST00000535504 PRAM1Q96QH2 718 aa31.31■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms