RNA–Protein interactions for RNA: ENST00000535466.5

CD4-203, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-203ENST00000535466 ANKLE2Q86XL3 938 aa9.69□□□□□ -0.86
CD4-203ENST00000535466 RIMS2Q9UQ26 1411 aa9.69□□□□□ -0.86
CD4-203ENST00000535466 CPS1P31327 1500 aa9.68□□□□□ -0.86
CD4-203ENST00000535466 FOXD1Q16676 465 aa9.68□□□□□ -0.86
CD4-203ENST00000535466 SLC52A1Q9NWF4 448 aa9.68□□□□□ -0.86
CD4-203ENST00000535466 TXNDC2Q86VQ3 553 aa9.67□□□□□ -0.86
CD4-203ENST00000535466 RAB3GAP2Q9H2M9 1393 aa9.66□□□□□ -0.86
CD4-203ENST00000535466 PLEKHG1Q9ULL1 1385 aa9.66□□□□□ -0.86
CD4-203ENST00000535466 SETD1AO15047 1707 aaKnown RBP9.66□□□□□ -0.86
CD4-203ENST00000535466 PTPRUQ92729 1446 aa9.65□□□□□ -0.86
CD4-203ENST00000535466 SETD5Q9C0A6 1442 aa9.65□□□□□ -0.86
CD4-203ENST00000535466 NUTM2DQ5VT03 806 aaPredicted RBP9.65□□□□□ -0.86
CD4-203ENST00000535466 SETBP1Q9Y6X0 1596 aa9.65□□□□□ -0.86
CD4-203ENST00000535466 SPATA31E1Q6ZUB1 1445 aa9.64□□□□□ -0.87
CD4-203ENST00000535466 XRN1Q8IZH2 1706 aaKnown RBP9.63□□□□□ -0.87
CD4-203ENST00000535466 SLC26A8Q96RN1 970 aa9.63□□□□□ -0.87
CD4-203ENST00000535466 CHD2O14647 1828 aaKnown RBP9.62□□□□□ -0.87
CD4-203ENST00000535466 IFT172Q9UG01 1749 aa9.62□□□□□ -0.87
CD4-203ENST00000535466 ASXL1Q8IXJ9 1541 aa9.61□□□□□ -0.87
CD4-203ENST00000535466 PPLO60437 1756 aa9.61□□□□□ -0.87
CD4-203ENST00000535466 RBM33Q96EV2 1170 aaKnown RBP9.61□□□□□ -0.87
CD4-203ENST00000535466 SLC4A1APQ9BWU0 796 aaKnown RBP9.61□□□□□ -0.87
CD4-203ENST00000535466 DIP2AQ14689 1571 aa9.61□□□□□ -0.87
CD4-203ENST00000535466 NKTRP30414 1462 aaKnown RBP9.6□□□□□ -0.87
CD4-203ENST00000535466 TRIM52Q96A61 297 aa9.6□□□□□ -0.87
CD4-203ENST00000535466 MPHOSPH9Q99550 1183 aa9.6□□□□□ -0.87
CD4-203ENST00000535466 STAG3Q9UJ98 1225 aa9.6□□□□□ -0.87
CD4-203ENST00000535466 KIF1BO60333 1816 aa9.6□□□□□ -0.87
CD4-203ENST00000535466 METP08581 1390 aa9.6□□□□□ -0.87
CD4-203ENST00000535466 TMEM94Q12767 1356 aa9.6□□□□□ -0.87
CD4-203ENST00000535466 CHGAP10645 457 aaKnown RBP9.59□□□□□ -0.87
CD4-203ENST00000535466 EID1Q9Y6B2 187 aa9.59□□□□□ -0.87
CD4-203ENST00000535466 KCNA6P17658 529 aa9.57□□□□□ -0.88
CD4-203ENST00000535466 ADRA2BP18089 450 aa9.57□□□□□ -0.88
CD4-203ENST00000535466 ANKRD30BQ9BXX2 1392 aa9.57□□□□□ -0.88
CD4-203ENST00000535466 NRXN1Q9ULB1 1477 aa9.56□□□□□ -0.88
CD4-203ENST00000535466 UBAP1LF5GYI3 381 aa9.56□□□□□ -0.88
CD4-203ENST00000535466 PRAG1Q86YV5 1406 aa9.56□□□□□ -0.88
CD4-203ENST00000535466 TBX22Q9Y458 520 aa9.55□□□□□ -0.88
CD4-203ENST00000535466 CCDC144AA2RUR9 1427 aa9.55□□□□□ -0.88
CD4-203ENST00000535466 PIK3C2GO75747 1445 aa9.55□□□□□ -0.88
CD4-203ENST00000535466 ADGRF5Q8IZF2 1346 aa9.55□□□□□ -0.88
CD4-203ENST00000535466 NALCNQ8IZF0 1738 aa9.54□□□□□ -0.88
CD4-203ENST00000535466 PIK3R4Q99570 1358 aa9.53□□□□□ -0.88
CD4-203ENST00000535466 ROBO2Q9HCK4 1378 aa9.53□□□□□ -0.88
CD4-203ENST00000535466 PPP1R15AO75807 674 aaPredicted RBP9.53□□□□□ -0.88
CD4-203ENST00000535466 HSPA1LP34931 641 aa9.53□□□□□ -0.88
CD4-203ENST00000535466 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.53□□□□□ -0.88
CD4-203ENST00000535466 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.53□□□□□ -0.88
CD4-203ENST00000535466 MYOM2P54296 1465 aa9.52□□□□□ -0.89
CD4-203ENST00000535466 ROBO1Q9Y6N7 1651 aa9.51□□□□□ -0.89
CD4-203ENST00000535466 DHX57Q6P158 1386 aaKnown RBP9.51□□□□□ -0.89
CD4-203ENST00000535466 PTCH1Q13635 1447 aa9.51□□□□□ -0.89
CD4-203ENST00000535466 PIP4K2BP78356 416 aa9.51□□□□□ -0.89
CD4-203ENST00000535466 ZNF326Q5BKZ1 582 aaKnown RBP9.51□□□□□ -0.89
CD4-203ENST00000535466 ADGRB1O14514 1584 aa9.5□□□□□ -0.89
CD4-203ENST00000535466 HRCP23327 699 aa9.5□□□□□ -0.89
CD4-203ENST00000535466 AMOTL2Q9Y2J4 779 aa9.5□□□□□ -0.89
CD4-203ENST00000535466 TECPR2O15040 1411 aa9.49□□□□□ -0.89
CD4-203ENST00000535466 KNDC1Q76NI1 1749 aa9.49□□□□□ -0.89
CD4-203ENST00000535466 RPGRIP1LQ68CZ1 1315 aa9.49□□□□□ -0.89
CD4-203ENST00000535466 PLEKHH1Q9ULM0 1364 aa9.49□□□□□ -0.89
CD4-203ENST00000535466 MST1RQ04912 1400 aa9.48□□□□□ -0.89
CD4-203ENST00000535466 FAM135BQ49AJ0 1406 aa9.48□□□□□ -0.89
CD4-203ENST00000535466 ADGRL3Q9HAR2 1447 aa9.48□□□□□ -0.89
CD4-203ENST00000535466 NCOA3Q9Y6Q9 1424 aa9.48□□□□□ -0.89
CD4-203ENST00000535466 RGL3Q3MIN7 710 aa9.48□□□□□ -0.89
CD4-203ENST00000535466 PROSER2Q86WR7 435 aaPredicted RBP9.48□□□□□ -0.89
CD4-203ENST00000535466 COL16A1Q07092 1604 aaPredicted RBP9.48□□□□□ -0.89
CD4-203ENST00000535466 MED1Q15648 1581 aaPredicted RBP9.47□□□□□ -0.89
CD4-203ENST00000535466 TOM1O60784 492 aa9.47□□□□□ -0.89
CD4-203ENST00000535466 BCANQ96GW7 911 aa9.47□□□□□ -0.89
CD4-203ENST00000535466 DCCP43146 1447 aa9.47□□□□□ -0.89
CD4-203ENST00000535466 AHDC1Q5TGY3 1603 aaPredicted RBP9.45□□□□□ -0.9
CD4-203ENST00000535466 HDGFP51858 240 aaKnown RBP9.45□□□□□ -0.9
CD4-203ENST00000535466 SCAF1Q9H7N4 1312 aaKnown RBP9.45□□□□□ -0.9
CD4-203ENST00000535466 LRPPRCP42704 1394 aaKnown RBP9.45□□□□□ -0.9
CD4-203ENST00000535466 MSH6P52701 1360 aa9.45□□□□□ -0.9
CD4-203ENST00000535466 VGFO15240 615 aaPredicted RBP9.44□□□□□ -0.9
CD4-203ENST00000535466 TMEM132EQ6IEE7 984 aa9.44□□□□□ -0.9
CD4-203ENST00000535466 YTHDC2Q9H6S0 1430 aaKnown RBP9.44□□□□□ -0.9
CD4-203ENST00000535466 CDC42BPGQ6DT37 1551 aa9.44□□□□□ -0.9
CD4-203ENST00000535466 LAMC1P11047 1609 aa9.44□□□□□ -0.9
CD4-203ENST00000535466 NHSL1Q5SYE7 1610 aa9.44□□□□□ -0.9
CD4-203ENST00000535466 CFAP70Q5T0N1 1121 aa9.43□□□□□ -0.9
CD4-203ENST00000535466 PHLPP1O60346 1717 aa9.42□□□□□ -0.9
CD4-203ENST00000535466 LRP6O75581 1613 aa9.42□□□□□ -0.9
CD4-203ENST00000535466 C1orf167Q5SNV9 1468 aa9.42□□□□□ -0.9
CD4-203ENST00000535466 ABCC11Q96J66 1382 aa9.42□□□□□ -0.9
CD4-203ENST00000535466 ILDR2Q71H61 639 aa9.42□□□□□ -0.9
CD4-203ENST00000535466 BRINP3Q76B58 766 aa9.42□□□□□ -0.9
CD4-203ENST00000535466 C14orf93Q9H972 538 aaKnown RBP9.42□□□□□ -0.9
CD4-203ENST00000535466 SLAIN2Q9P270 581 aa9.42□□□□□ -0.9
CD4-203ENST00000535466 DLC1Q96QB1 1528 aa9.41□□□□□ -0.9
CD4-203ENST00000535466 WAPLQ7Z5K2 1190 aa9.41□□□□□ -0.9
CD4-203ENST00000535466 DDX17Q92841 729 aaKnown RBP9.41□□□□□ -0.9
CD4-203ENST00000535466 C19orf44Q9H6X5 657 aa9.41□□□□□ -0.9
CD4-203ENST00000535466 FMN2Q9NZ56 1722 aa9.4□□□□□ -0.9
CD4-203ENST00000535466 ACIN1Q9UKV3 1341 aaKnown RBP9.4□□□□□ -0.9
CD4-203ENST00000535466 USP32Q8NFA0 1604 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms