RNA–Protein interactions for RNA: ENST00000535239.5

MSRB3-205, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-205ENST00000535239 CHGAP10645 457 aaKnown RBP22.98■■□□□ 1.27
MSRB3-205ENST00000535239 TRIM52Q96A61 297 aa22.98■■□□□ 1.27
MSRB3-205ENST00000535239 ACIN1Q9UKV3 1341 aaKnown RBP22.98■■□□□ 1.27
MSRB3-205ENST00000535239 TRPM2O94759 1503 aa22.98■■□□□ 1.27
MSRB3-205ENST00000535239 TOM1O60784 492 aa22.97■■□□□ 1.27
MSRB3-205ENST00000535239 KCNA6P17658 529 aa22.97■■□□□ 1.27
MSRB3-205ENST00000535239 SLC26A8Q96RN1 970 aa22.97■■□□□ 1.27
MSRB3-205ENST00000535239 SLC4A1APQ9BWU0 796 aaKnown RBP22.95■■□□□ 1.26
MSRB3-205ENST00000535239 TBX22Q9Y458 520 aa22.95■■□□□ 1.26
MSRB3-205ENST00000535239 PPP1R15AO75807 674 aaPredicted RBP22.93■■□□□ 1.26
MSRB3-205ENST00000535239 NWD1Q149M9 1564 aa22.92■■□□□ 1.26
MSRB3-205ENST00000535239 CLTCL1P53675 1640 aa22.91■■□□□ 1.26
MSRB3-205ENST00000535239 ALKQ9UM73 1620 aa22.91■■□□□ 1.26
MSRB3-205ENST00000535239 ADAMTS13Q76LX8 1427 aa22.91■■□□□ 1.26
MSRB3-205ENST00000535239 BCANQ96GW7 911 aa22.89■■□□□ 1.25
MSRB3-205ENST00000535239 NKTRP30414 1462 aaKnown RBP22.89■■□□□ 1.25
MSRB3-205ENST00000535239 SETD5Q9C0A6 1442 aa22.89■■□□□ 1.25
MSRB3-205ENST00000535239 XIRP1Q702N8 1843 aaKnown RBP22.89■■□□□ 1.25
MSRB3-205ENST00000535239 DIP2AQ14689 1571 aa22.89■■□□□ 1.25
MSRB3-205ENST00000535239 PIK3R4Q99570 1358 aa22.89■■□□□ 1.25
MSRB3-205ENST00000535239 CHD2O14647 1828 aaKnown RBP22.88■■□□□ 1.25
MSRB3-205ENST00000535239 MPHOSPH9Q99550 1183 aa22.86■■□□□ 1.25
MSRB3-205ENST00000535239 KIF1BO60333 1816 aa22.85■■□□□ 1.25
MSRB3-205ENST00000535239 NUTM2DQ5VT03 806 aaPredicted RBP22.85■■□□□ 1.25
MSRB3-205ENST00000535239 TMEM94Q12767 1356 aa22.85■■□□□ 1.25
MSRB3-205ENST00000535239 PROSER2Q86WR7 435 aaPredicted RBP22.84■■□□□ 1.25
MSRB3-205ENST00000535239 NEXMIFQ5QGS0 1516 aa22.83■■□□□ 1.25
MSRB3-205ENST00000535239 ZNF326Q5BKZ1 582 aaKnown RBP22.83■■□□□ 1.25
MSRB3-205ENST00000535239 SETBP1Q9Y6X0 1596 aa22.83■■□□□ 1.25
MSRB3-205ENST00000535239 PIP4K2BP78356 416 aa22.81■■□□□ 1.24
MSRB3-205ENST00000535239 NCOA3Q9Y6Q9 1424 aa22.81■■□□□ 1.24
MSRB3-205ENST00000535239 RPGRIP1LQ68CZ1 1315 aa22.81■■□□□ 1.24
MSRB3-205ENST00000535239 NRXN3Q9Y4C0 1643 aa22.8■■□□□ 1.24
MSRB3-205ENST00000535239 HRCP23327 699 aa22.78■■□□□ 1.24
MSRB3-205ENST00000535239 FOXD1Q16676 465 aa22.78■■□□□ 1.24
MSRB3-205ENST00000535239 RAB3GAP2Q9H2M9 1393 aa22.77■■□□□ 1.24
MSRB3-205ENST00000535239 SENP3Q9H4L4 574 aaPredicted RBP22.77■■□□□ 1.24
MSRB3-205ENST00000535239 VGFO15240 615 aaPredicted RBP22.76■■□□□ 1.23
MSRB3-205ENST00000535239 HSPA1LP34931 641 aa22.76■■□□□ 1.23
MSRB3-205ENST00000535239 SCAF1Q9H7N4 1312 aaKnown RBP22.76■■□□□ 1.23
MSRB3-205ENST00000535239 CCDC144AA2RUR9 1427 aa22.74■■□□□ 1.23
MSRB3-205ENST00000535239 PTPRUQ92729 1446 aa22.74■■□□□ 1.23
MSRB3-205ENST00000535239 FAM135BQ49AJ0 1406 aa22.74■■□□□ 1.23
MSRB3-205ENST00000535239 AMOTL2Q9Y2J4 779 aa22.73■■□□□ 1.23
MSRB3-205ENST00000535239 RBM33Q96EV2 1170 aaKnown RBP22.72■■□□□ 1.23
MSRB3-205ENST00000535239 MSH6P52701 1360 aa22.72■■□□□ 1.23
MSRB3-205ENST00000535239 SPATA31E1Q6ZUB1 1445 aa22.72■■□□□ 1.23
MSRB3-205ENST00000535239 METP08581 1390 aa22.7■■□□□ 1.22
MSRB3-205ENST00000535239 PPLO60437 1756 aa22.7■■□□□ 1.22
MSRB3-205ENST00000535239 XRN1Q8IZH2 1706 aaKnown RBP22.69■■□□□ 1.22
MSRB3-205ENST00000535239 C19orf44Q9H6X5 657 aa22.67■■□□□ 1.22
MSRB3-205ENST00000535239 ANKRD30BQ9BXX2 1392 aa22.65■■□□□ 1.22
MSRB3-205ENST00000535239 SLAIN2Q9P270 581 aa22.65■■□□□ 1.22
MSRB3-205ENST00000535239 SETD1AO15047 1707 aaKnown RBP22.65■■□□□ 1.22
MSRB3-205ENST00000535239 PRAG1Q86YV5 1406 aa22.64■■□□□ 1.21
MSRB3-205ENST00000535239 CADPS2Q86UW7 1296 aa22.62■■□□□ 1.21
MSRB3-205ENST00000535239 IFT172Q9UG01 1749 aa22.62■■□□□ 1.21
MSRB3-205ENST00000535239 DCCP43146 1447 aa22.61■■□□□ 1.21
MSRB3-205ENST00000535239 RGL3Q3MIN7 710 aa22.61■■□□□ 1.21
MSRB3-205ENST00000535239 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.61■■□□□ 1.21
MSRB3-205ENST00000535239 DISP3Q9P2K9 1392 aa22.61■■□□□ 1.21
MSRB3-205ENST00000535239 ADGRF5Q8IZF2 1346 aa22.6■■□□□ 1.21
MSRB3-205ENST00000535239 ROBO1Q9Y6N7 1651 aa22.6■■□□□ 1.21
MSRB3-205ENST00000535239 C14orf37Q86TY3 774 aa22.58■■□□□ 1.21
MSRB3-205ENST00000535239 PTCH1Q13635 1447 aa22.57■■□□□ 1.2
MSRB3-205ENST00000535239 ATF3P18847 181 aa22.56■■□□□ 1.2
MSRB3-205ENST00000535239 PIK3C2GO75747 1445 aa22.54■■□□□ 1.2
MSRB3-205ENST00000535239 ADGRL3Q9HAR2 1447 aa22.53■■□□□ 1.2
MSRB3-205ENST00000535239 NRXN1Q9ULB1 1477 aa22.53■■□□□ 1.2
MSRB3-205ENST00000535239 MYOM2P54296 1465 aa22.52■■□□□ 1.2
MSRB3-205ENST00000535239 ROBO2Q9HCK4 1378 aa22.51■■□□□ 1.19
MSRB3-205ENST00000535239 MED1Q15648 1581 aaPredicted RBP22.51■■□□□ 1.19
MSRB3-205ENST00000535239 TECPR2O15040 1411 aa22.49■■□□□ 1.19
MSRB3-205ENST00000535239 C14orf93Q9H972 538 aaKnown RBP22.49■■□□□ 1.19
MSRB3-205ENST00000535239 STAC3Q96MF2 364 aa22.48■■□□□ 1.19
MSRB3-205ENST00000535239 ABCC11Q96J66 1382 aa22.48■■□□□ 1.19
MSRB3-205ENST00000535239 MST1RQ04912 1400 aa22.48■■□□□ 1.19
MSRB3-205ENST00000535239 NALCNQ8IZF0 1738 aa22.47■■□□□ 1.19
MSRB3-205ENST00000535239 LRPPRCP42704 1394 aaKnown RBP22.47■■□□□ 1.19
MSRB3-205ENST00000535239 ASXL1Q8IXJ9 1541 aa22.46■■□□□ 1.19
MSRB3-205ENST00000535239 AHDC1Q5TGY3 1603 aaPredicted RBP22.46■■□□□ 1.19
MSRB3-205ENST00000535239 BRINP3Q76B58 766 aa22.45■■□□□ 1.18
MSRB3-205ENST00000535239 PHLPP1O60346 1717 aa22.45■■□□□ 1.18
MSRB3-205ENST00000535239 ILDR2Q71H61 639 aa22.44■■□□□ 1.18
MSRB3-205ENST00000535239 SIRT1Q96EB6 747 aa22.44■■□□□ 1.18
MSRB3-205ENST00000535239 COL16A1Q07092 1604 aaPredicted RBP22.43■■□□□ 1.18
MSRB3-205ENST00000535239 LAMC1P11047 1609 aa22.42■■□□□ 1.18
MSRB3-205ENST00000535239 TMEM132EQ6IEE7 984 aa22.42■■□□□ 1.18
MSRB3-205ENST00000535239 KNDC1Q76NI1 1749 aa22.42■■□□□ 1.18
MSRB3-205ENST00000535239 YTHDC2Q9H6S0 1430 aaKnown RBP22.41■■□□□ 1.18
MSRB3-205ENST00000535239 JCADQ9P266 1359 aa22.4■■□□□ 1.18
MSRB3-205ENST00000535239 CFAP70Q5T0N1 1121 aa22.4■■□□□ 1.18
MSRB3-205ENST00000535239 C1orf167Q5SNV9 1468 aa22.39■■□□□ 1.17
MSRB3-205ENST00000535239 DHX57Q6P158 1386 aaKnown RBP22.38■■□□□ 1.17
MSRB3-205ENST00000535239 STK26Q9P289 416 aa22.38■■□□□ 1.17
MSRB3-205ENST00000535239 WAPLQ7Z5K2 1190 aa22.36■■□□□ 1.17
MSRB3-205ENST00000535239 DCAF11Q8TEB1 546 aa22.36■■□□□ 1.17
MSRB3-205ENST00000535239 CDC42BPGQ6DT37 1551 aa22.36■■□□□ 1.17
MSRB3-205ENST00000535239 NHSL1Q5SYE7 1610 aa22.35■■□□□ 1.17
MSRB3-205ENST00000535239 ADGRB1O14514 1584 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms