RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 MYO5BQ9ULV0 1848 aa12.34□□□□□ -0.43
SF3B2-216ENST00000534765 SYNMO15061 1565 aa12.34□□□□□ -0.43
SF3B2-216ENST00000534765 ST20-MTHFSA0A0A6YYL1 179 aa12.34□□□□□ -0.43
SF3B2-216ENST00000534765 IFT172Q9UG01 1749 aa12.33□□□□□ -0.43
SF3B2-216ENST00000534765 CAMSAP1Q5T5Y3 1602 aa12.33□□□□□ -0.44
SF3B2-216ENST00000534765 ERICH6BQ5W0A0 696 aa12.33□□□□□ -0.44
SF3B2-216ENST00000534765 GLIPR1L2Q4G1C9 344 aa12.31□□□□□ -0.44
SF3B2-216ENST00000534765 NPM2Q86SE8 214 aaKnown RBP12.31□□□□□ -0.44
SF3B2-216ENST00000534765 LMTK2Q8IWU2 1503 aa12.31□□□□□ -0.44
SF3B2-216ENST00000534765 NUTM2DQ5VT03 806 aaPredicted RBP12.31□□□□□ -0.44
SF3B2-216ENST00000534765 ADGRF5Q8IZF2 1346 aa12.3□□□□□ -0.44
SF3B2-216ENST00000534765 CARD11Q9BXL7 1154 aa12.3□□□□□ -0.44
SF3B2-216ENST00000534765 NOP58Q9Y2X3 529 aaKnown RBP12.29□□□□□ -0.44
SF3B2-216ENST00000534765 ZMYM4Q5VZL5 1548 aa12.29□□□□□ -0.44
SF3B2-216ENST00000534765 FBXO31Q5XUX0 539 aaPredicted RBP12.29□□□□□ -0.44
SF3B2-216ENST00000534765 VSIG10Q8N0Z9 540 aa12.29□□□□□ -0.44
SF3B2-216ENST00000534765 ROCK2O75116 1388 aaKnown RBP12.29□□□□□ -0.44
SF3B2-216ENST00000534765 DISP3Q9P2K9 1392 aa12.28□□□□□ -0.44
SF3B2-216ENST00000534765 A0A0U1RQG5 324 aaPredicted RBP12.28□□□□□ -0.44
SF3B2-216ENST00000534765 TESK2Q96S53 571 aa12.28□□□□□ -0.44
SF3B2-216ENST00000534765 KIF1BO60333 1816 aa12.27□□□□□ -0.44
SF3B2-216ENST00000534765 CNTLNQ9NXG0 1405 aa12.27□□□□□ -0.45
SF3B2-216ENST00000534765 PIK3C2BO00750 1634 aa12.27□□□□□ -0.45
SF3B2-216ENST00000534765 IQGAP1P46940 1657 aa12.26□□□□□ -0.45
SF3B2-216ENST00000534765 POLR3GLQ9BT43 218 aa12.26□□□□□ -0.45
SF3B2-216ENST00000534765 SENP3-EIF4A1A0A087X0R7 540 aa12.26□□□□□ -0.45
SF3B2-216ENST00000534765 ADGRB3O60242 1522 aa12.26□□□□□ -0.45
SF3B2-216ENST00000534765 PPLO60437 1756 aa12.25□□□□□ -0.45
SF3B2-216ENST00000534765 GPRASP1Q5JY77 1395 aa12.25□□□□□ -0.45
SF3B2-216ENST00000534765 WASHC2CQ9Y4E1 1318 aa12.25□□□□□ -0.45
SF3B2-216ENST00000534765 CLTCQ00610 1675 aaKnown RBP12.25□□□□□ -0.45
SF3B2-216ENST00000534765 ANP32AP39687 249 aaKnown RBP12.24□□□□□ -0.45
SF3B2-216ENST00000534765 CFAP70Q5T0N1 1121 aa12.24□□□□□ -0.45
SF3B2-216ENST00000534765 LAS1LQ9Y4W2 734 aaKnown RBP12.24□□□□□ -0.45
SF3B2-216ENST00000534765 PREX1Q8TCU6 1659 aa12.24□□□□□ -0.45
SF3B2-216ENST00000534765 ZBTB47Q9UFB7 747 aaPredicted RBP12.23□□□□□ -0.45
SF3B2-216ENST00000534765 NOS1P29475 1434 aa12.23□□□□□ -0.45
SF3B2-216ENST00000534765 MLECQ14165 292 aa12.23□□□□□ -0.45
SF3B2-216ENST00000534765 KANK1Q14678 1352 aa12.22□□□□□ -0.45
SF3B2-216ENST00000534765 LAMC1P11047 1609 aa12.21□□□□□ -0.45
SF3B2-216ENST00000534765 IDI1Q13907 227 aa12.21□□□□□ -0.46
SF3B2-216ENST00000534765 NRXN1Q9ULB1 1477 aa12.2□□□□□ -0.46
SF3B2-216ENST00000534765 PRKRIP1Q9H875 184 aaPredicted RBP12.19□□□□□ -0.46
SF3B2-216ENST00000534765 NEXMIFQ5QGS0 1516 aa12.19□□□□□ -0.46
SF3B2-216ENST00000534765 MYOM1P52179 1685 aa12.19□□□□□ -0.46
SF3B2-216ENST00000534765 CHGAP10645 457 aaKnown RBP12.19□□□□□ -0.46
SF3B2-216ENST00000534765 TMEM132EQ6IEE7 984 aa12.19□□□□□ -0.46
SF3B2-216ENST00000534765 FANCIQ9NVI1 1328 aa12.19□□□□□ -0.46
SF3B2-216ENST00000534765 TMEM131LA2VDJ0 1609 aa12.19□□□□□ -0.46
SF3B2-216ENST00000534765 NEFMP07197 916 aa12.19□□□□□ -0.46
SF3B2-216ENST00000534765 ARHGEF40Q8TER5 1519 aa12.18□□□□□ -0.46
SF3B2-216ENST00000534765 PAK3O75914 559 aaPredicted RBP12.18□□□□□ -0.46
SF3B2-216ENST00000534765 ADGRB1O14514 1584 aa12.17□□□□□ -0.46
SF3B2-216ENST00000534765 ASXL1Q8IXJ9 1541 aa12.17□□□□□ -0.46
SF3B2-216ENST00000534765 ANP32CO43423 234 aa12.17□□□□□ -0.46
SF3B2-216ENST00000534765 ZC3H13Q5T200 1668 aaKnown RBP12.17□□□□□ -0.46
SF3B2-216ENST00000534765 NEURL4Q96JN8 1562 aa12.16□□□□□ -0.46
SF3B2-216ENST00000534765 PIK3C2GO75747 1445 aa12.16□□□□□ -0.46
SF3B2-216ENST00000534765 PER1O15534 1290 aaPredicted RBP12.15□□□□□ -0.46
SF3B2-216ENST00000534765 MYOM2P54296 1465 aa12.15□□□□□ -0.46
SF3B2-216ENST00000534765 REREQ9P2R6 1566 aa12.15□□□□□ -0.47
SF3B2-216ENST00000534765 B4GALNT3Q6L9W6 998 aa12.14□□□□□ -0.47
SF3B2-216ENST00000534765 KIAA1210Q9ULL0 1709 aa12.14□□□□□ -0.47
SF3B2-216ENST00000534765 ARHGAP31Q2M1Z3 1444 aa12.13□□□□□ -0.47
SF3B2-216ENST00000534765 ARXQ96QS3 562 aa12.13□□□□□ -0.47
SF3B2-216ENST00000534765 ERVK-7P63135 1459 aa12.13□□□□□ -0.47
SF3B2-216ENST00000534765 BRPF3Q9ULD4 1205 aa12.13□□□□□ -0.47
SF3B2-216ENST00000534765 HNRNPUQ00839 825 aaKnown RBP eCLIP12.12□□□□□ -0.47
SF3B2-216ENST00000534765 ARID4BQ4LE39 1312 aaPredicted RBP12.12□□□□□ -0.47
SF3B2-216ENST00000534765 AGLP35573 1532 aa12.12□□□□□ -0.47
SF3B2-216ENST00000534765 CEBPAP49715 358 aaPredicted RBP12.11□□□□□ -0.47
SF3B2-216ENST00000534765 CCER2I3L3R5 266 aa12.11□□□□□ -0.47
SF3B2-216ENST00000534765 SCAF11Q99590 1463 aaKnown RBP12.11□□□□□ -0.47
SF3B2-216ENST00000534765 DAXXQ9UER7 740 aaPredicted RBP12.1□□□□□ -0.47
SF3B2-216ENST00000534765 ARHGEF28Q8N1W1 1705 aaKnown RBP12.1□□□□□ -0.47
SF3B2-216ENST00000534765 TRAK1Q9UPV9 953 aa12.1□□□□□ -0.47
SF3B2-216ENST00000534765 SETD1AO15047 1707 aaKnown RBP12.09□□□□□ -0.47
SF3B2-216ENST00000534765 PTPRMP28827 1452 aa12.09□□□□□ -0.47
SF3B2-216ENST00000534765 QRICH2Q9H0J4 1663 aa12.09□□□□□ -0.47
SF3B2-216ENST00000534765 PANK3Q9H999 370 aa12.08□□□□□ -0.47
SF3B2-216ENST00000534765 SPATA31D1Q6ZQQ2 1576 aa12.08□□□□□ -0.48
SF3B2-216ENST00000534765 MYO3AQ8NEV4 1616 aa12.08□□□□□ -0.48
SF3B2-216ENST00000534765 NRXN3Q9Y4C0 1643 aa12.08□□□□□ -0.48
SF3B2-216ENST00000534765 FAM9BQ8IZU0 186 aa12.07□□□□□ -0.48
SF3B2-216ENST00000534765 ZMYND15Q9H091 742 aa12.07□□□□□ -0.48
SF3B2-216ENST00000534765 C14orf93Q9H972 538 aaKnown RBP12.07□□□□□ -0.48
SF3B2-216ENST00000534765 TRHP20396 242 aaPredicted RBP12.07□□□□□ -0.48
SF3B2-216ENST00000534765 ZMYM3Q14202 1370 aa12.06□□□□□ -0.48
SF3B2-216ENST00000534765 A2ML1A8K2U0 1454 aa12.06□□□□□ -0.48
SF3B2-216ENST00000534765 CC2D1BQ5T0F9 858 aaKnown RBP12.06□□□□□ -0.48
SF3B2-216ENST00000534765 PLPPR3Q6T4P5 718 aa12.06□□□□□ -0.48
SF3B2-216ENST00000534765 SAFB2Q14151 953 aaKnown RBP eCLIP12.05□□□□□ -0.48
SF3B2-216ENST00000534765 CARD14Q9BXL6 1004 aa12.05□□□□□ -0.48
SF3B2-216ENST00000534765 SETBP1Q9Y6X0 1596 aa12.05□□□□□ -0.48
SF3B2-216ENST00000534765 NAP1L5Q96NT1 182 aaPredicted RBP12.05□□□□□ -0.48
SF3B2-216ENST00000534765 TULP4Q9NRJ4 1543 aa12.04□□□□□ -0.48
SF3B2-216ENST00000534765 MRS2Q9HD23 443 aa12.04□□□□□ -0.48
SF3B2-216ENST00000534765 C3P01024 1663 aa12.03□□□□□ -0.48
SF3B2-216ENST00000534765 STK26Q9P289 416 aa12.03□□□□□ -0.48
SF3B2-216ENST00000534765 ALKQ9UM73 1620 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms