RNA–Protein interactions for RNA: ENST00000534763.1

CCS-209, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-209ENST00000534763 CPS1P31327 1500 aa19.16■□□□□ 0.66
CCS-209ENST00000534763 CHGAP10645 457 aaKnown RBP19.16■□□□□ 0.66
CCS-209ENST00000534763 FBXO41Q8TF61 875 aa19.16■□□□□ 0.66
CCS-209ENST00000534763 PLEKHG1Q9ULL1 1385 aa19.16■□□□□ 0.66
CCS-209ENST00000534763 CLTCL1P53675 1640 aa19.15■□□□□ 0.66
CCS-209ENST00000534763 PPP1R15AO75807 674 aaPredicted RBP19.12■□□□□ 0.65
CCS-209ENST00000534763 MYO5BQ9ULV0 1848 aa19.11■□□□□ 0.65
CCS-209ENST00000534763 CCDC144AA2RUR9 1427 aa19.1■□□□□ 0.65
CCS-209ENST00000534763 FOXD1Q16676 465 aa19.1■□□□□ 0.65
CCS-209ENST00000534763 RPGRIP1LQ68CZ1 1315 aa19.09■□□□□ 0.65
CCS-209ENST00000534763 TBX22Q9Y458 520 aa19.09■□□□□ 0.65
CCS-209ENST00000534763 ZNF326Q5BKZ1 582 aaKnown RBP19.08■□□□□ 0.64
CCS-209ENST00000534763 ILDR1Q86SU0 546 aaPredicted RBP19.08■□□□□ 0.64
CCS-209ENST00000534763 KIF1BO60333 1816 aa19.07■□□□□ 0.64
CCS-209ENST00000534763 DIP2AQ14689 1571 aa19.06■□□□□ 0.64
CCS-209ENST00000534763 SLC26A8Q96RN1 970 aa19.06■□□□□ 0.64
CCS-209ENST00000534763 PIK3R4Q99570 1358 aa19.06■□□□□ 0.64
CCS-209ENST00000534763 NEXMIFQ5QGS0 1516 aa19.05■□□□□ 0.64
CCS-209ENST00000534763 KCNA6P17658 529 aa19.05■□□□□ 0.64
CCS-209ENST00000534763 BCANQ96GW7 911 aa19.05■□□□□ 0.64
CCS-209ENST00000534763 VGFO15240 615 aaPredicted RBP19.04■□□□□ 0.64
CCS-209ENST00000534763 SPATA31E1Q6ZUB1 1445 aa19.04■□□□□ 0.64
CCS-209ENST00000534763 ADAMTS13Q76LX8 1427 aa19.04■□□□□ 0.64
CCS-209ENST00000534763 SETBP1Q9Y6X0 1596 aa19.03■□□□□ 0.64
CCS-209ENST00000534763 LRRC7Q96NW7 1537 aa19.02■□□□□ 0.64
CCS-209ENST00000534763 NUTM2DQ5VT03 806 aaPredicted RBP19.02■□□□□ 0.64
CCS-209ENST00000534763 ANKRD30BQ9BXX2 1392 aa19.02■□□□□ 0.64
CCS-209ENST00000534763 NWD1Q149M9 1564 aa19.02■□□□□ 0.63
CCS-209ENST00000534763 TRIM26Q12899 539 aaPredicted RBP19.01■□□□□ 0.63
CCS-209ENST00000534763 NKTRP30414 1462 aaKnown RBP19.01■□□□□ 0.63
CCS-209ENST00000534763 STRCP1A6NGW2 1772 aa19.01■□□□□ 0.63
CCS-209ENST00000534763 NRXN3Q9Y4C0 1643 aa18.97■□□□□ 0.63
CCS-209ENST00000534763 NCOA3Q9Y6Q9 1424 aa18.95■□□□□ 0.62
CCS-209ENST00000534763 CHD2O14647 1828 aaKnown RBP18.95■□□□□ 0.62
CCS-209ENST00000534763 PPLO60437 1756 aa18.94■□□□□ 0.62
CCS-209ENST00000534763 UBAP1LF5GYI3 381 aa18.94■□□□□ 0.62
CCS-209ENST00000534763 TOM1O60784 492 aa18.94■□□□□ 0.62
CCS-209ENST00000534763 RGL3Q3MIN7 710 aa18.93■□□□□ 0.62
CCS-209ENST00000534763 PROSER2Q86WR7 435 aaPredicted RBP18.93■□□□□ 0.62
CCS-209ENST00000534763 TMEM94Q12767 1356 aa18.93■□□□□ 0.62
CCS-209ENST00000534763 STAC3Q96MF2 364 aa18.92■□□□□ 0.62
CCS-209ENST00000534763 SENP3Q9H4L4 574 aaPredicted RBP18.91■□□□□ 0.62
CCS-209ENST00000534763 AMOTL2Q9Y2J4 779 aa18.9■□□□□ 0.62
CCS-209ENST00000534763 IFT172Q9UG01 1749 aa18.9■□□□□ 0.62
CCS-209ENST00000534763 METP08581 1390 aa18.9■□□□□ 0.62
CCS-209ENST00000534763 PTPRUQ92729 1446 aa18.9■□□□□ 0.62
CCS-209ENST00000534763 MYOM2P54296 1465 aa18.89■□□□□ 0.61
CCS-209ENST00000534763 ALKQ9UM73 1620 aa18.89■□□□□ 0.61
CCS-209ENST00000534763 ADGRF5Q8IZF2 1346 aa18.88■□□□□ 0.61
CCS-209ENST00000534763 PRAG1Q86YV5 1406 aa18.88■□□□□ 0.61
CCS-209ENST00000534763 PIK3C2GO75747 1445 aa18.87■□□□□ 0.61
CCS-209ENST00000534763 XRN1Q8IZH2 1706 aaKnown RBP18.87■□□□□ 0.61
CCS-209ENST00000534763 NRXN1Q9ULB1 1477 aa18.87■□□□□ 0.61
CCS-209ENST00000534763 XIRP1Q702N8 1843 aaKnown RBP18.86■□□□□ 0.61
CCS-209ENST00000534763 SETD1AO15047 1707 aaKnown RBP18.85■□□□□ 0.61
CCS-209ENST00000534763 MSH6P52701 1360 aa18.84■□□□□ 0.61
CCS-209ENST00000534763 PTCH1Q13635 1447 aa18.83■□□□□ 0.6
CCS-209ENST00000534763 C19orf44Q9H6X5 657 aa18.82■□□□□ 0.6
CCS-209ENST00000534763 C14orf93Q9H972 538 aaKnown RBP18.82■□□□□ 0.6
CCS-209ENST00000534763 RBM33Q96EV2 1170 aaKnown RBP18.8■□□□□ 0.6
CCS-209ENST00000534763 DHX57Q6P158 1386 aaKnown RBP18.8■□□□□ 0.6
CCS-209ENST00000534763 PIP4K2BP78356 416 aa18.79■□□□□ 0.6
CCS-209ENST00000534763 DCCP43146 1447 aa18.79■□□□□ 0.6
CCS-209ENST00000534763 LAMC1P11047 1609 aa18.78■□□□□ 0.6
CCS-209ENST00000534763 TECPR2O15040 1411 aa18.78■□□□□ 0.6
CCS-209ENST00000534763 FAM135BQ49AJ0 1406 aa18.78■□□□□ 0.6
CCS-209ENST00000534763 DCAF11Q8TEB1 546 aa18.78■□□□□ 0.6
CCS-209ENST00000534763 CADPS2Q86UW7 1296 aa18.77■□□□□ 0.6
CCS-209ENST00000534763 LRPPRCP42704 1394 aaKnown RBP18.77■□□□□ 0.6
CCS-209ENST00000534763 ABCC11Q96J66 1382 aa18.77■□□□□ 0.6
CCS-209ENST00000534763 C14orf37Q86TY3 774 aa18.76■□□□□ 0.59
CCS-209ENST00000534763 SIRT1Q96EB6 747 aa18.76■□□□□ 0.59
CCS-209ENST00000534763 SLAIN2Q9P270 581 aa18.75■□□□□ 0.59
CCS-209ENST00000534763 ROBO2Q9HCK4 1378 aa18.75■□□□□ 0.59
CCS-209ENST00000534763 SCAF1Q9H7N4 1312 aaKnown RBP18.74■□□□□ 0.59
CCS-209ENST00000534763 ADGRL3Q9HAR2 1447 aa18.74■□□□□ 0.59
CCS-209ENST00000534763 ATF3P18847 181 aa18.74■□□□□ 0.59
CCS-209ENST00000534763 CFAP70Q5T0N1 1121 aa18.74■□□□□ 0.59
CCS-209ENST00000534763 ASXL1Q8IXJ9 1541 aa18.74■□□□□ 0.59
CCS-209ENST00000534763 YTHDC2Q9H6S0 1430 aaKnown RBP18.73■□□□□ 0.59
CCS-209ENST00000534763 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.72■□□□□ 0.59
CCS-209ENST00000534763 KDM2AQ9Y2K7 1162 aa18.72■□□□□ 0.59
CCS-209ENST00000534763 TMEM132EQ6IEE7 984 aa18.71■□□□□ 0.59
CCS-209ENST00000534763 HSPA1LP34931 641 aa18.7■□□□□ 0.58
CCS-209ENST00000534763 KNDC1Q76NI1 1749 aa18.7■□□□□ 0.58
CCS-209ENST00000534763 ADGRB1O14514 1584 aa18.68■□□□□ 0.58
CCS-209ENST00000534763 SIN3AQ96ST3 1273 aa18.67■□□□□ 0.58
CCS-209ENST00000534763 STK26Q9P289 416 aa18.67■□□□□ 0.58
CCS-209ENST00000534763 DLC1Q96QB1 1528 aa18.67■□□□□ 0.58
CCS-209ENST00000534763 L3MBTL2Q969R5 705 aa18.66■□□□□ 0.58
CCS-209ENST00000534763 ROBO1Q9Y6N7 1651 aa18.66■□□□□ 0.58
CCS-209ENST00000534763 NALCNQ8IZF0 1738 aa18.66■□□□□ 0.58
CCS-209ENST00000534763 MST1RQ04912 1400 aa18.66■□□□□ 0.58
CCS-209ENST00000534763 KIAA1210Q9ULL0 1709 aa18.64■□□□□ 0.57
CCS-209ENST00000534763 WAPLQ7Z5K2 1190 aa18.63■□□□□ 0.57
CCS-209ENST00000534763 CDC42BPGQ6DT37 1551 aa18.63■□□□□ 0.57
CCS-209ENST00000534763 NEUROD1Q13562 356 aa18.62■□□□□ 0.57
CCS-209ENST00000534763 PCGF6Q9BYE7 350 aa18.62■□□□□ 0.57
CCS-209ENST00000534763 PLEKHH1Q9ULM0 1364 aa18.6■□□□□ 0.57
CCS-209ENST00000534763 BRINP3Q76B58 766 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms