RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 KCNA6P17658 529 aa28.69■■■□□ 2.18
NDUFS3-213ENST00000534716 HDGFP51858 240 aaKnown RBP28.69■■■□□ 2.18
NDUFS3-213ENST00000534716 SLC26A8Q96RN1 970 aa28.68■■■□□ 2.18
NDUFS3-213ENST00000534716 RIMS2Q9UQ26 1411 aa28.68■■■□□ 2.18
NDUFS3-213ENST00000534716 PLEKHG1Q9ULL1 1385 aa28.67■■■□□ 2.18
NDUFS3-213ENST00000534716 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.63■■■□□ 2.17
NDUFS3-213ENST00000534716 NWD1Q149M9 1564 aa28.62■■■□□ 2.17
NDUFS3-213ENST00000534716 XIRP1Q702N8 1843 aaKnown RBP28.62■■■□□ 2.17
NDUFS3-213ENST00000534716 NKTRP30414 1462 aaKnown RBP28.6■■■□□ 2.17
NDUFS3-213ENST00000534716 TMEM94Q12767 1356 aa28.6■■■□□ 2.17
NDUFS3-213ENST00000534716 NAIPQ13075 1403 aa28.6■■■□□ 2.17
NDUFS3-213ENST00000534716 MYO5BQ9ULV0 1848 aa28.59■■■□□ 2.17
NDUFS3-213ENST00000534716 PPP1R15AO75807 674 aaPredicted RBP28.59■■■□□ 2.17
NDUFS3-213ENST00000534716 TBX22Q9Y458 520 aa28.58■■■□□ 2.17
NDUFS3-213ENST00000534716 CHGAP10645 457 aaKnown RBP28.57■■■□□ 2.16
NDUFS3-213ENST00000534716 BCANQ96GW7 911 aa28.57■■■□□ 2.16
NDUFS3-213ENST00000534716 PROSER2Q86WR7 435 aaPredicted RBP28.56■■■□□ 2.16
NDUFS3-213ENST00000534716 HFM1A2PYH4 1435 aa28.52■■■□□ 2.16
NDUFS3-213ENST00000534716 FAM135BQ49AJ0 1406 aa28.52■■■□□ 2.16
NDUFS3-213ENST00000534716 ADAMTS13Q76LX8 1427 aa28.52■■■□□ 2.16
NDUFS3-213ENST00000534716 DIP2AQ14689 1571 aa28.5■■■□□ 2.15
NDUFS3-213ENST00000534716 PIK3R4Q99570 1358 aa28.5■■■□□ 2.15
NDUFS3-213ENST00000534716 SPHKAPQ2M3C7 1700 aa28.49■■■□□ 2.15
NDUFS3-213ENST00000534716 CHD2O14647 1828 aaKnown RBP28.48■■■□□ 2.15
NDUFS3-213ENST00000534716 MED1Q15648 1581 aaPredicted RBP28.48■■■□□ 2.15
NDUFS3-213ENST00000534716 NCOA3Q9Y6Q9 1424 aa28.46■■■□□ 2.15
NDUFS3-213ENST00000534716 NUTM2DQ5VT03 806 aaPredicted RBP28.46■■■□□ 2.15
NDUFS3-213ENST00000534716 RBM33Q96EV2 1170 aaKnown RBP28.45■■■□□ 2.14
NDUFS3-213ENST00000534716 SENP3Q9H4L4 574 aaPredicted RBP28.45■■■□□ 2.14
NDUFS3-213ENST00000534716 TRPM2O94759 1503 aa28.44■■■□□ 2.14
NDUFS3-213ENST00000534716 MSH6P52701 1360 aa28.44■■■□□ 2.14
NDUFS3-213ENST00000534716 SETBP1Q9Y6X0 1596 aa28.38■■■□□ 2.13
NDUFS3-213ENST00000534716 CLTCL1P53675 1640 aa28.38■■■□□ 2.13
NDUFS3-213ENST00000534716 ZNF326Q5BKZ1 582 aaKnown RBP28.36■■■□□ 2.13
NDUFS3-213ENST00000534716 SLAIN2Q9P270 581 aa28.36■■■□□ 2.13
NDUFS3-213ENST00000534716 TRIM52Q96A61 297 aa28.35■■■□□ 2.13
NDUFS3-213ENST00000534716 NRXN3Q9Y4C0 1643 aa28.34■■■□□ 2.13
NDUFS3-213ENST00000534716 PHF23Q9BUL5 403 aaPredicted RBP28.34■■■□□ 2.13
NDUFS3-213ENST00000534716 ROBO1Q9Y6N7 1651 aa28.34■■■□□ 2.13
NDUFS3-213ENST00000534716 PTPRUQ92729 1446 aa28.34■■■□□ 2.13
NDUFS3-213ENST00000534716 NEXMIFQ5QGS0 1516 aa28.33■■■□□ 2.13
NDUFS3-213ENST00000534716 SLC4A1APQ9BWU0 796 aaKnown RBP28.32■■■□□ 2.12
NDUFS3-213ENST00000534716 AMOTL2Q9Y2J4 779 aa28.32■■■□□ 2.12
NDUFS3-213ENST00000534716 C19orf44Q9H6X5 657 aa28.31■■■□□ 2.12
NDUFS3-213ENST00000534716 CADPS2Q86UW7 1296 aa28.27■■■□□ 2.12
NDUFS3-213ENST00000534716 XRN1Q8IZH2 1706 aaKnown RBP28.26■■■□□ 2.11
NDUFS3-213ENST00000534716 METP08581 1390 aa28.25■■■□□ 2.11
NDUFS3-213ENST00000534716 KIF1BO60333 1816 aa28.25■■■□□ 2.11
NDUFS3-213ENST00000534716 RPGRIP1LQ68CZ1 1315 aa28.24■■■□□ 2.11
NDUFS3-213ENST00000534716 C14orf37Q86TY3 774 aa28.24■■■□□ 2.11
NDUFS3-213ENST00000534716 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.23■■■□□ 2.11
NDUFS3-213ENST00000534716 VGFO15240 615 aaPredicted RBP28.22■■■□□ 2.11
NDUFS3-213ENST00000534716 ATF3P18847 181 aa28.22■■■□□ 2.11
NDUFS3-213ENST00000534716 DCCP43146 1447 aa28.22■■■□□ 2.11
NDUFS3-213ENST00000534716 ACIN1Q9UKV3 1341 aaKnown RBP28.18■■■□□ 2.1
NDUFS3-213ENST00000534716 MPHOSPH9Q99550 1183 aa28.15■■■□□ 2.1
NDUFS3-213ENST00000534716 PHLPP1O60346 1717 aa28.15■■■□□ 2.1
NDUFS3-213ENST00000534716 FOXD1Q16676 465 aa28.14■■■□□ 2.1
NDUFS3-213ENST00000534716 RGS17Q9UGC6 210 aaPredicted RBP28.14■■■□□ 2.1
NDUFS3-213ENST00000534716 JCADQ9P266 1359 aa28.13■■■□□ 2.09
NDUFS3-213ENST00000534716 PRAG1Q86YV5 1406 aa28.12■■■□□ 2.09
NDUFS3-213ENST00000534716 COL16A1Q07092 1604 aaPredicted RBP28.12■■■□□ 2.09
NDUFS3-213ENST00000534716 AHDC1Q5TGY3 1603 aaPredicted RBP28.12■■■□□ 2.09
NDUFS3-213ENST00000534716 CCDC144AA2RUR9 1427 aa28.1■■■□□ 2.09
NDUFS3-213ENST00000534716 PTCH1Q13635 1447 aa28.09■■■□□ 2.09
NDUFS3-213ENST00000534716 ADGRL3Q9HAR2 1447 aa28.09■■■□□ 2.09
NDUFS3-213ENST00000534716 SETD1AO15047 1707 aaKnown RBP28.09■■■□□ 2.09
NDUFS3-213ENST00000534716 BRINP3Q76B58 766 aa28.09■■■□□ 2.09
NDUFS3-213ENST00000534716 PPLO60437 1756 aa28.08■■■□□ 2.09
NDUFS3-213ENST00000534716 MST1RQ04912 1400 aa28.08■■■□□ 2.09
NDUFS3-213ENST00000534716 SPATA31E1Q6ZUB1 1445 aa28.08■■■□□ 2.09
NDUFS3-213ENST00000534716 SETD5Q9C0A6 1442 aa28.08■■■□□ 2.09
NDUFS3-213ENST00000534716 SPATA31A6Q5VVP1 1343 aa28.03■■■□□ 2.08
NDUFS3-213ENST00000534716 ASXL1Q8IXJ9 1541 aa28.02■■■□□ 2.08
NDUFS3-213ENST00000534716 ANKRD30BQ9BXX2 1392 aa28.02■■■□□ 2.08
NDUFS3-213ENST00000534716 ROBO2Q9HCK4 1378 aa28.02■■■□□ 2.08
NDUFS3-213ENST00000534716 NALCNQ8IZF0 1738 aa28■■■□□ 2.07
NDUFS3-213ENST00000534716 ADGRF5Q8IZF2 1346 aa27.99■■■□□ 2.07
NDUFS3-213ENST00000534716 RGL3Q3MIN7 710 aa27.97■■■□□ 2.07
NDUFS3-213ENST00000534716 SHPRHQ149N8 1683 aa27.97■■■□□ 2.07
NDUFS3-213ENST00000534716 POTEAQ6S8J7 498 aa27.96■■■□□ 2.07
NDUFS3-213ENST00000534716 RAB3GAP2Q9H2M9 1393 aa27.95■■■□□ 2.06
NDUFS3-213ENST00000534716 NHSL1Q5SYE7 1610 aa27.94■■■□□ 2.06
NDUFS3-213ENST00000534716 IFT172Q9UG01 1749 aa27.94■■■□□ 2.06
NDUFS3-213ENST00000534716 C1orf167Q5SNV9 1468 aa27.94■■■□□ 2.06
NDUFS3-213ENST00000534716 LRP6O75581 1613 aa27.93■■■□□ 2.06
NDUFS3-213ENST00000534716 TECPR2O15040 1411 aa27.92■■■□□ 2.06
NDUFS3-213ENST00000534716 PIK3C2GO75747 1445 aa27.92■■■□□ 2.06
NDUFS3-213ENST00000534716 LRRC59Q96AG4 307 aaKnown RBP27.89■■■□□ 2.06
NDUFS3-213ENST00000534716 LRPPRCP42704 1394 aaKnown RBP27.88■■■□□ 2.05
NDUFS3-213ENST00000534716 ABCC11Q96J66 1382 aa27.87■■■□□ 2.05
NDUFS3-213ENST00000534716 LAMC1P11047 1609 aa27.87■■■□□ 2.05
NDUFS3-213ENST00000534716 HRCP23327 699 aa27.86■■■□□ 2.05
NDUFS3-213ENST00000534716 NRXN1Q9ULB1 1477 aa27.85■■■□□ 2.05
NDUFS3-213ENST00000534716 CDC42BPGQ6DT37 1551 aa27.83■■■□□ 2.05
NDUFS3-213ENST00000534716 MEX3CQ5U5Q3 659 aaKnown RBP27.83■■■□□ 2.05
NDUFS3-213ENST00000534716 DDX17Q92841 729 aaKnown RBP27.83■■■□□ 2.05
NDUFS3-213ENST00000534716 MYOM2P54296 1465 aa27.83■■■□□ 2.04
NDUFS3-213ENST00000534716 ORAI2Q96SN7 254 aa27.82■■■□□ 2.04
NDUFS3-213ENST00000534716 C14orf93Q9H972 538 aaKnown RBP27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms