RNA–Protein interactions for RNA: ENST00000534591.1

VPS51-216, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-216ENST00000534591 PRAG1Q86YV5 1406 aa24.07■■□□□ 1.44
VPS51-216ENST00000534591 NOS1P29475 1434 aa24.05■■□□□ 1.44
VPS51-216ENST00000534591 ILDR1Q86SU0 546 aaPredicted RBP24.05■■□□□ 1.44
VPS51-216ENST00000534591 DMRT2Q9Y5R5 561 aa24.05■■□□□ 1.44
VPS51-216ENST00000534591 MYO5BQ9ULV0 1848 aa24.04■■□□□ 1.44
VPS51-216ENST00000534591 KIF1BO60333 1816 aa24.04■■□□□ 1.44
VPS51-216ENST00000534591 HIRIP3Q9BW71 556 aaPredicted RBP24.01■■□□□ 1.43
VPS51-216ENST00000534591 LTBP4Q8N2S1 1624 aa24■■□□□ 1.43
VPS51-216ENST00000534591 KDM5AP29375 1690 aaKnown RBP23.99■■□□□ 1.43
VPS51-216ENST00000534591 TRPM1Q7Z4N2 1603 aa23.99■■□□□ 1.43
VPS51-216ENST00000534591 IQGAP1P46940 1657 aa23.98■■□□□ 1.43
VPS51-216ENST00000534591 ADGRB3O60242 1522 aa23.96■■□□□ 1.43
VPS51-216ENST00000534591 USP47Q96K76 1375 aa23.96■■□□□ 1.43
VPS51-216ENST00000534591 THEMISQ8N1K5 641 aaPredicted RBP23.95■■□□□ 1.43
VPS51-216ENST00000534591 CARD11Q9BXL7 1154 aa23.95■■□□□ 1.43
VPS51-216ENST00000534591 ROCK2O75116 1388 aaKnown RBP23.95■■□□□ 1.42
VPS51-216ENST00000534591 GPRASP1Q5JY77 1395 aa23.95■■□□□ 1.42
VPS51-216ENST00000534591 LAMC1P11047 1609 aa23.94■■□□□ 1.42
VPS51-216ENST00000534591 SLIT1O75093 1534 aa23.93■■□□□ 1.42
VPS51-216ENST00000534591 MYOM2P54296 1465 aa23.93■■□□□ 1.42
VPS51-216ENST00000534591 ARHGAP23Q9P227 1491 aa23.93■■□□□ 1.42
VPS51-216ENST00000534591 SLC52A1Q9NWF4 448 aa23.93■■□□□ 1.42
VPS51-216ENST00000534591 MED14O60244 1454 aa23.92■■□□□ 1.42
VPS51-216ENST00000534591 IDI1Q13907 227 aa23.91■■□□□ 1.42
VPS51-216ENST00000534591 RPGRIP1LQ68CZ1 1315 aa23.91■■□□□ 1.42
VPS51-216ENST00000534591 ZNF335Q9H4Z2 1342 aaPredicted RBP23.91■■□□□ 1.42
VPS51-216ENST00000534591 CERKQ8TCT0 537 aa23.9■■□□□ 1.42
VPS51-216ENST00000534591 IFT172Q9UG01 1749 aa23.9■■□□□ 1.42
VPS51-216ENST00000534591 DDX10Q13206 875 aaKnown RBP23.89■■□□□ 1.42
VPS51-216ENST00000534591 NPHP4O75161 1426 aaPredicted RBP23.89■■□□□ 1.42
VPS51-216ENST00000534591 TMEM131LA2VDJ0 1609 aa23.89■■□□□ 1.42
VPS51-216ENST00000534591 STRCP1A6NGW2 1772 aa23.89■■□□□ 1.41
VPS51-216ENST00000534591 ANKLE2Q86XL3 938 aa23.89■■□□□ 1.41
VPS51-216ENST00000534591 SCAF11Q99590 1463 aaKnown RBP23.88■■□□□ 1.41
VPS51-216ENST00000534591 MIER1Q8N108 512 aa23.87■■□□□ 1.41
VPS51-216ENST00000534591 FBXO41Q8TF61 875 aa23.87■■□□□ 1.41
VPS51-216ENST00000534591 CHGAP10645 457 aaKnown RBP23.86■■□□□ 1.41
VPS51-216ENST00000534591 KIAA1210Q9ULL0 1709 aa23.86■■□□□ 1.41
VPS51-216ENST00000534591 WASHC2AQ641Q2 1341 aa23.85■■□□□ 1.41
VPS51-216ENST00000534591 LTKP29376 864 aa23.84■■□□□ 1.41
VPS51-216ENST00000534591 NBPF1Q3BBV0 1214 aa23.84■■□□□ 1.41
VPS51-216ENST00000534591 NRXN1Q9ULB1 1477 aa23.84■■□□□ 1.41
VPS51-216ENST00000534591 TMEM2Q9UHN6 1383 aa23.84■■□□□ 1.41
VPS51-216ENST00000534591 CCDC7Q96M83 1385 aa23.83■■□□□ 1.41
VPS51-216ENST00000534591 PPLO60437 1756 aa23.83■■□□□ 1.41
VPS51-216ENST00000534591 STAG3Q9UJ98 1225 aa23.81■■□□□ 1.4
VPS51-216ENST00000534591 ADGRF5Q8IZF2 1346 aa23.79■■□□□ 1.4
VPS51-216ENST00000534591 C11orf95C9JLR9 678 aaPredicted RBP23.79■■□□□ 1.4
VPS51-216ENST00000534591 ST20-MTHFSA0A0A6YYL1 179 aa23.78■■□□□ 1.4
VPS51-216ENST00000534591 TXNDC2Q86VQ3 553 aa23.78■■□□□ 1.4
VPS51-216ENST00000534591 ZFYVE9O95405 1425 aa23.77■■□□□ 1.4
VPS51-216ENST00000534591 KIF7Q2M1P5 1343 aa23.77■■□□□ 1.39
VPS51-216ENST00000534591 VGFO15240 615 aaPredicted RBP23.75■■□□□ 1.39
VPS51-216ENST00000534591 NEXMIFQ5QGS0 1516 aa23.75■■□□□ 1.39
VPS51-216ENST00000534591 IQSEC2Q5JU85 1478 aa23.74■■□□□ 1.39
VPS51-216ENST00000534591 CPS1P31327 1500 aa23.73■■□□□ 1.39
VPS51-216ENST00000534591 PIK3C2GO75747 1445 aa23.73■■□□□ 1.39
VPS51-216ENST00000534591 XIRP1Q702N8 1843 aaKnown RBP23.73■■□□□ 1.39
VPS51-216ENST00000534591 EID1Q9Y6B2 187 aa23.72■■□□□ 1.39
VPS51-216ENST00000534591 RIMS2Q9UQ26 1411 aa23.71■■□□□ 1.39
VPS51-216ENST00000534591 CFAP70Q5T0N1 1121 aa23.7■■□□□ 1.38
VPS51-216ENST00000534591 SETBP1Q9Y6X0 1596 aa23.7■■□□□ 1.38
VPS51-216ENST00000534591 SENP3Q9H4L4 574 aaPredicted RBP23.69■■□□□ 1.38
VPS51-216ENST00000534591 C14orf93Q9H972 538 aaKnown RBP23.69■■□□□ 1.38
VPS51-216ENST00000534591 EIF3AQ14152 1382 aaKnown RBP23.68■■□□□ 1.38
VPS51-216ENST00000534591 ANP32CO43423 234 aa23.66■■□□□ 1.38
VPS51-216ENST00000534591 TESK2Q96S53 571 aa23.65■■□□□ 1.38
VPS51-216ENST00000534591 LRRC7Q96NW7 1537 aa23.65■■□□□ 1.38
VPS51-216ENST00000534591 NUTM2DQ5VT03 806 aaPredicted RBP23.64■■□□□ 1.38
VPS51-216ENST00000534591 NRXN3Q9Y4C0 1643 aa23.64■■□□□ 1.37
VPS51-216ENST00000534591 CHD2O14647 1828 aaKnown RBP23.63■■□□□ 1.37
VPS51-216ENST00000534591 SLC24A1O60721 1099 aa23.63■■□□□ 1.37
VPS51-216ENST00000534591 SLC26A8Q96RN1 970 aa23.63■■□□□ 1.37
VPS51-216ENST00000534591 PLEKHG1Q9ULL1 1385 aa23.62■■□□□ 1.37
VPS51-216ENST00000534591 ALKQ9UM73 1620 aa23.62■■□□□ 1.37
VPS51-216ENST00000534591 NWD1Q149M9 1564 aa23.61■■□□□ 1.37
VPS51-216ENST00000534591 TMF1P82094 1093 aa23.6■■□□□ 1.37
VPS51-216ENST00000534591 ADGRB1O14514 1584 aa23.6■■□□□ 1.37
VPS51-216ENST00000534591 ADAMTS13Q76LX8 1427 aa23.58■■□□□ 1.37
VPS51-216ENST00000534591 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.57■■□□□ 1.36
VPS51-216ENST00000534591 POLR3GLQ9BT43 218 aa23.57■■□□□ 1.36
VPS51-216ENST00000534591 CCER2I3L3R5 266 aa23.56■■□□□ 1.36
VPS51-216ENST00000534591 DIP2AQ14689 1571 aa23.55■■□□□ 1.36
VPS51-216ENST00000534591 HDGFP51858 240 aaKnown RBP23.55■■□□□ 1.36
VPS51-216ENST00000534591 BCANQ96GW7 911 aa23.55■■□□□ 1.36
VPS51-216ENST00000534591 DISP3Q9P2K9 1392 aa23.54■■□□□ 1.36
VPS51-216ENST00000534591 UBAP1LF5GYI3 381 aa23.54■■□□□ 1.36
VPS51-216ENST00000534591 CDCA8Q53HL2 280 aa23.54■■□□□ 1.36
VPS51-216ENST00000534591 SBNO2Q9Y2G9 1366 aa23.53■■□□□ 1.36
VPS51-216ENST00000534591 SETD1AO15047 1707 aaKnown RBP23.51■■□□□ 1.35
VPS51-216ENST00000534591 NKTRP30414 1462 aaKnown RBP23.5■■□□□ 1.35
VPS51-216ENST00000534591 TMEM132EQ6IEE7 984 aa23.49■■□□□ 1.35
VPS51-216ENST00000534591 CENPJQ9HC77 1338 aaPredicted RBP23.49■■□□□ 1.35
VPS51-216ENST00000534591 KCNA6P17658 529 aa23.49■■□□□ 1.35
VPS51-216ENST00000534591 RBM33Q96EV2 1170 aaKnown RBP23.48■■□□□ 1.35
VPS51-216ENST00000534591 XRN1Q8IZH2 1706 aaKnown RBP23.47■■□□□ 1.35
VPS51-216ENST00000534591 TRAK1Q9UPV9 953 aa23.47■■□□□ 1.35
VPS51-216ENST00000534591 TMEM94Q12767 1356 aa23.46■■□□□ 1.35
VPS51-216ENST00000534591 ASXL1Q8IXJ9 1541 aa23.45■■□□□ 1.34
VPS51-216ENST00000534591 PTPRUQ92729 1446 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms