RNA–Protein interactions for RNA: ENST00000534538.1

RECQL4-207, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-207ENST00000534538 ZFYVE9O95405 1425 aa27.19■■□□□ 1.94
RECQL4-207ENST00000534538 BCANQ96GW7 911 aa27.19■■□□□ 1.94
RECQL4-207ENST00000534538 PLEKHG1Q9ULL1 1385 aa27.17■■□□□ 1.94
RECQL4-207ENST00000534538 NKTRP30414 1462 aaKnown RBP27.16■■□□□ 1.94
RECQL4-207ENST00000534538 UNC13BO14795 1591 aa27.16■■□□□ 1.94
RECQL4-207ENST00000534538 RIMS2Q9UQ26 1411 aa27.15■■□□□ 1.94
RECQL4-207ENST00000534538 GCC2Q8IWJ2 1684 aa27.14■■□□□ 1.94
RECQL4-207ENST00000534538 NWD1Q149M9 1564 aa27.14■■□□□ 1.94
RECQL4-207ENST00000534538 TMEM131LA2VDJ0 1609 aa27.13■■□□□ 1.93
RECQL4-207ENST00000534538 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.13■■□□□ 1.93
RECQL4-207ENST00000534538 RBM33Q96EV2 1170 aaKnown RBP27.13■■□□□ 1.93
RECQL4-207ENST00000534538 PPP1R15AO75807 674 aaPredicted RBP27.12■■□□□ 1.93
RECQL4-207ENST00000534538 TBX22Q9Y458 520 aa27.12■■□□□ 1.93
RECQL4-207ENST00000534538 MYO5BQ9ULV0 1848 aa27.09■■□□□ 1.93
RECQL4-207ENST00000534538 CHGAP10645 457 aaKnown RBP27.08■■□□□ 1.93
RECQL4-207ENST00000534538 MSH6P52701 1360 aa27.08■■□□□ 1.93
RECQL4-207ENST00000534538 E9PCH4 1651 aa27.07■■□□□ 1.92
RECQL4-207ENST00000534538 NUP155O75694 1391 aa27.07■■□□□ 1.92
RECQL4-207ENST00000534538 IQGAP3Q86VI3 1631 aa27.06■■□□□ 1.92
RECQL4-207ENST00000534538 SLAIN2Q9P270 581 aa27.06■■□□□ 1.92
RECQL4-207ENST00000534538 CHD2O14647 1828 aaKnown RBP27.05■■□□□ 1.92
RECQL4-207ENST00000534538 RGS17Q9UGC6 210 aaPredicted RBP27.04■■□□□ 1.92
RECQL4-207ENST00000534538 NCOA3Q9Y6Q9 1424 aa27.04■■□□□ 1.92
RECQL4-207ENST00000534538 ITGAEP38570 1179 aa27.03■■□□□ 1.92
RECQL4-207ENST00000534538 ROBO1Q9Y6N7 1651 aa27.03■■□□□ 1.92
RECQL4-207ENST00000534538 ADAMTS13Q76LX8 1427 aa27■■□□□ 1.91
RECQL4-207ENST00000534538 PIK3R4Q99570 1358 aa27■■□□□ 1.91
RECQL4-207ENST00000534538 NUTM2DQ5VT03 806 aaPredicted RBP26.99■■□□□ 1.91
RECQL4-207ENST00000534538 DIP2AQ14689 1571 aa26.97■■□□□ 1.91
RECQL4-207ENST00000534538 PPARGC1BQ86YN6 1023 aaKnown RBP26.96■■□□□ 1.91
RECQL4-207ENST00000534538 C19orf44Q9H6X5 657 aa26.93■■□□□ 1.9
RECQL4-207ENST00000534538 C14orf37Q86TY3 774 aa26.91■■□□□ 1.9
RECQL4-207ENST00000534538 CADPS2Q86UW7 1296 aa26.91■■□□□ 1.9
RECQL4-207ENST00000534538 AMOTL2Q9Y2J4 779 aa26.91■■□□□ 1.9
RECQL4-207ENST00000534538 JCADQ9P266 1359 aa26.89■■□□□ 1.9
RECQL4-207ENST00000534538 TRPM2O94759 1503 aa26.88■■□□□ 1.89
RECQL4-207ENST00000534538 ATF3P18847 181 aa26.87■■□□□ 1.89
RECQL4-207ENST00000534538 POTEAQ6S8J7 498 aa26.87■■□□□ 1.89
RECQL4-207ENST00000534538 PHLPP1O60346 1717 aa26.87■■□□□ 1.89
RECQL4-207ENST00000534538 PTPRUQ92729 1446 aa26.85■■□□□ 1.89
RECQL4-207ENST00000534538 RRBP1Q9P2E9 1410 aaKnown RBP26.83■■□□□ 1.89
RECQL4-207ENST00000534538 SPHKAPQ2M3C7 1700 aa26.83■■□□□ 1.89
RECQL4-207ENST00000534538 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.83■■□□□ 1.89
RECQL4-207ENST00000534538 ZNF326Q5BKZ1 582 aaKnown RBP26.82■■□□□ 1.88
RECQL4-207ENST00000534538 SETBP1Q9Y6X0 1596 aa26.81■■□□□ 1.88
RECQL4-207ENST00000534538 COL16A1Q07092 1604 aaPredicted RBP26.79■■□□□ 1.88
RECQL4-207ENST00000534538 SPATA31A6Q5VVP1 1343 aa26.78■■□□□ 1.88
RECQL4-207ENST00000534538 NAIPQ13075 1403 aa26.78■■□□□ 1.88
RECQL4-207ENST00000534538 NRXN3Q9Y4C0 1643 aa26.78■■□□□ 1.88
RECQL4-207ENST00000534538 DCCP43146 1447 aa26.77■■□□□ 1.88
RECQL4-207ENST00000534538 AHDC1Q5TGY3 1603 aaPredicted RBP26.76■■□□□ 1.87
RECQL4-207ENST00000534538 METP08581 1390 aa26.76■■□□□ 1.87
RECQL4-207ENST00000534538 BRINP3Q76B58 766 aa26.75■■□□□ 1.87
RECQL4-207ENST00000534538 XRN1Q8IZH2 1706 aaKnown RBP26.74■■□□□ 1.87
RECQL4-207ENST00000534538 CLTCL1P53675 1640 aa26.72■■□□□ 1.87
RECQL4-207ENST00000534538 NEXMIFQ5QGS0 1516 aa26.7■■□□□ 1.86
RECQL4-207ENST00000534538 VGFO15240 615 aaPredicted RBP26.67■■□□□ 1.86
RECQL4-207ENST00000534538 LRP6O75581 1613 aa26.67■■□□□ 1.86
RECQL4-207ENST00000534538 HFM1A2PYH4 1435 aa26.66■■□□□ 1.86
RECQL4-207ENST00000534538 MST1RQ04912 1400 aa26.66■■□□□ 1.86
RECQL4-207ENST00000534538 TRIM52Q96A61 297 aa26.66■■□□□ 1.86
RECQL4-207ENST00000534538 SHPRHQ149N8 1683 aa26.66■■□□□ 1.86
RECQL4-207ENST00000534538 MEX3CQ5U5Q3 659 aaKnown RBP26.65■■□□□ 1.86
RECQL4-207ENST00000534538 ZNF772Q68DY9 489 aaPredicted RBP26.65■■□□□ 1.86
RECQL4-207ENST00000534538 KIF1BO60333 1816 aa26.65■■□□□ 1.86
RECQL4-207ENST00000534538 ADGRL3Q9HAR2 1447 aa26.64■■□□□ 1.85
RECQL4-207ENST00000534538 RPGRIP1LQ68CZ1 1315 aa26.64■■□□□ 1.85
RECQL4-207ENST00000534538 ASXL1Q8IXJ9 1541 aa26.63■■□□□ 1.85
RECQL4-207ENST00000534538 SLC4A1APQ9BWU0 796 aaKnown RBP26.62■■□□□ 1.85
RECQL4-207ENST00000534538 SETD5Q9C0A6 1442 aa26.62■■□□□ 1.85
RECQL4-207ENST00000534538 LRRC59Q96AG4 307 aaKnown RBP26.61■■□□□ 1.85
RECQL4-207ENST00000534538 NUTM2BA6NNL0 878 aaPredicted RBP26.56■■□□□ 1.84
RECQL4-207ENST00000534538 NUTM2EB1AL46 878 aaPredicted RBP26.56■■□□□ 1.84
RECQL4-207ENST00000534538 NUTM2AQ8IVF1 878 aaPredicted RBP26.56■■□□□ 1.84
RECQL4-207ENST00000534538 PTCH1Q13635 1447 aa26.56■■□□□ 1.84
RECQL4-207ENST00000534538 NHSL1Q5SYE7 1610 aa26.55■■□□□ 1.84
RECQL4-207ENST00000534538 PRAG1Q86YV5 1406 aa26.54■■□□□ 1.84
RECQL4-207ENST00000534538 ROBO2Q9HCK4 1378 aa26.53■■□□□ 1.84
RECQL4-207ENST00000534538 NALCNQ8IZF0 1738 aa26.53■■□□□ 1.84
RECQL4-207ENST00000534538 C1orf167Q5SNV9 1468 aa26.51■■□□□ 1.83
RECQL4-207ENST00000534538 SETD1AO15047 1707 aaKnown RBP26.51■■□□□ 1.83
RECQL4-207ENST00000534538 RXRBP28702 533 aa26.5■■□□□ 1.83
RECQL4-207ENST00000534538 DDX17Q92841 729 aaKnown RBP26.5■■□□□ 1.83
RECQL4-207ENST00000534538 PNPLA6Q8IY17 1366 aa26.47■■□□□ 1.83
RECQL4-207ENST00000534538 AFF2P51816 1311 aa26.47■■□□□ 1.83
RECQL4-207ENST00000534538 PPLO60437 1756 aa26.46■■□□□ 1.83
RECQL4-207ENST00000534538 FOXD1Q16676 465 aa26.45■■□□□ 1.82
RECQL4-207ENST00000534538 SOS2Q07890 1332 aaPredicted RBP26.44■■□□□ 1.82
RECQL4-207ENST00000534538 ORAI2Q96SN7 254 aa26.44■■□□□ 1.82
RECQL4-207ENST00000534538 LAMC1P11047 1609 aa26.43■■□□□ 1.82
RECQL4-207ENST00000534538 CDK12Q9NYV4 1490 aaPredicted RBP26.43■■□□□ 1.82
RECQL4-207ENST00000534538 CCDC144AA2RUR9 1427 aa26.42■■□□□ 1.82
RECQL4-207ENST00000534538 UPF1Q92900 1129 aaKnown RBP eCLIP26.42■■□□□ 1.82
RECQL4-207ENST00000534538 MPHOSPH9Q99550 1183 aa26.42■■□□□ 1.82
RECQL4-207ENST00000534538 ADGRF5Q8IZF2 1346 aa26.4■■□□□ 1.82
RECQL4-207ENST00000534538 C8orf37Q96NL8 207 aa26.4■■□□□ 1.82
RECQL4-207ENST00000534538 ANKRD30BQ9BXX2 1392 aa26.39■■□□□ 1.82
RECQL4-207ENST00000534538 RGL3Q3MIN7 710 aa26.39■■□□□ 1.82
RECQL4-207ENST00000534538 SPATA31E1Q6ZUB1 1445 aa26.39■■□□□ 1.81
RECQL4-207ENST00000534538 QTRT2Q9H974 415 aaKnown RBP26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms