RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 SULF1Q8IWU6 871 aa5.35□□□□□ -1.55
CSDE1-216ENST00000534389 RDH13Q8NBN7 331 aa5.35□□□□□ -1.55
CSDE1-216ENST00000534389 PXYLP1Q8TE99 480 aa5.35□□□□□ -1.55
CSDE1-216ENST00000534389 SEPT9Q9UHD8 586 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-216ENST00000534389 DNAJB2P25686 324 aa5.34□□□□□ -1.55
CSDE1-216ENST00000534389 SSTR3P32745 418 aaPredicted RBP5.34□□□□□ -1.55
CSDE1-216ENST00000534389 RCCD1A6NED2 376 aa5.33□□□□□ -1.56
CSDE1-216ENST00000534389 DDX11L8A8MPP1 907 aa5.33□□□□□ -1.56
CSDE1-216ENST00000534389 BHMG1C9JSJ3 638 aaPredicted RBP5.33□□□□□ -1.56
CSDE1-216ENST00000534389 NUTM1Q86Y26 1132 aa5.33□□□□□ -1.56
CSDE1-216ENST00000534389 MRPL50Q8N5N7 158 aaKnown RBP5.33□□□□□ -1.56
CSDE1-216ENST00000534389 FAM117AQ9C073 453 aa5.33□□□□□ -1.56
CSDE1-216ENST00000534389 PPARGC1BQ86YN6 1023 aaKnown RBP5.32□□□□□ -1.56
CSDE1-216ENST00000534389 GTF3C3Q9Y5Q9 886 aa5.32□□□□□ -1.56
CSDE1-216ENST00000534389 FAM98CQ17RN3 349 aaKnown RBP5.31□□□□□ -1.56
CSDE1-216ENST00000534389 LAPTM4BQ86VI4 370 aa5.31□□□□□ -1.56
CSDE1-216ENST00000534389 SPNS2Q8IVW8 549 aa5.31□□□□□ -1.56
CSDE1-216ENST00000534389 PHOX2BQ99453 314 aa5.31□□□□□ -1.56
CSDE1-216ENST00000534389 EYA1Q99502 592 aa5.31□□□□□ -1.56
CSDE1-216ENST00000534389 BEGAINQ9BUH8 593 aa5.31□□□□□ -1.56
CSDE1-216ENST00000534389 RSPH6AQ9H0K4 717 aa5.31□□□□□ -1.56
CSDE1-216ENST00000534389 PCMTD1Q96MG8 357 aaPredicted RBP5.3□□□□□ -1.56
CSDE1-216ENST00000534389 FAM217BQ9NTX9 383 aaPredicted RBP5.3□□□□□ -1.56
CSDE1-216ENST00000534389 MS4A1P11836 297 aa5.29□□□□□ -1.56
CSDE1-216ENST00000534389 DIXDC1Q155Q3 683 aa5.29□□□□□ -1.56
CSDE1-216ENST00000534389 SLF2Q8IX21 1173 aa5.29□□□□□ -1.56
CSDE1-216ENST00000534389 NECTIN2Q92692 538 aa5.29□□□□□ -1.56
CSDE1-216ENST00000534389 LRCH3Q96II8 777 aa5.29□□□□□ -1.56
CSDE1-216ENST00000534389 ZFRQ96KR1 1074 aaKnown RBP5.29□□□□□ -1.56
CSDE1-216ENST00000534389 MYT1LQ9UL68 1186 aa5.29□□□□□ -1.56
CSDE1-216ENST00000534389 SWT1Q5T5J6 900 aaKnown RBP5.28□□□□□ -1.56
CSDE1-216ENST00000534389 ANKK1Q8NFD2 765 aa5.28□□□□□ -1.56
CSDE1-216ENST00000534389 KCTD12Q96CX2 325 aaKnown RBP5.28□□□□□ -1.56
CSDE1-216ENST00000534389 REPIN1Q9BWE0 567 aaKnown RBP5.28□□□□□ -1.56
CSDE1-216ENST00000534389 TMEM134Q9H6X4 195 aa5.28□□□□□ -1.56
CSDE1-216ENST00000534389 SAMD7Q7Z3H4 446 aa5.27□□□□□ -1.57
CSDE1-216ENST00000534389 WNT2BQ93097 391 aa5.27□□□□□ -1.57
CSDE1-216ENST00000534389 RNF166Q96A37 237 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-216ENST00000534389 POLR3EQ9NVU0 708 aa5.27□□□□□ -1.57
CSDE1-216ENST00000534389 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-216ENST00000534389 BCAMP50895 628 aa5.26□□□□□ -1.57
CSDE1-216ENST00000534389 GRIPAP1Q4V328 841 aa5.26□□□□□ -1.57
CSDE1-216ENST00000534389 ERICH6Q7L0X2 663 aa5.26□□□□□ -1.57
CSDE1-216ENST00000534389 C14orf37Q86TY3 774 aa5.26□□□□□ -1.57
CSDE1-216ENST00000534389 PPP4CP60510 307 aa5.25□□□□□ -1.57
CSDE1-216ENST00000534389 MYT1Q01538 1121 aa5.25□□□□□ -1.57
CSDE1-216ENST00000534389 MMRN1Q13201 1228 aa5.25□□□□□ -1.57
CSDE1-216ENST00000534389 CSPP1Q1MSJ5 1256 aa5.25□□□□□ -1.57
CSDE1-216ENST00000534389 KMT5BQ4FZB7 885 aa5.25□□□□□ -1.57
CSDE1-216ENST00000534389 PLEKHG3A1L390 1219 aa5.24□□□□□ -1.57
CSDE1-216ENST00000534389 SOWAHBA6NEL2 793 aa5.24□□□□□ -1.57
CSDE1-216ENST00000534389 NUTM2BA6NNL0 878 aaPredicted RBP5.24□□□□□ -1.57
CSDE1-216ENST00000534389 NUTM2EB1AL46 878 aaPredicted RBP5.24□□□□□ -1.57
CSDE1-216ENST00000534389 CFHP08603 1231 aa5.24□□□□□ -1.57
CSDE1-216ENST00000534389 CD46P15529 392 aa5.24□□□□□ -1.57
CSDE1-216ENST00000534389 NUTM2DQ5VT03 806 aaPredicted RBP5.24□□□□□ -1.57
CSDE1-216ENST00000534389 THSD4Q6ZMP0 1018 aa5.24□□□□□ -1.57
CSDE1-216ENST00000534389 NUTM2AQ8IVF1 878 aaPredicted RBP5.24□□□□□ -1.57
CSDE1-216ENST00000534389 TMUB1Q9BVT8 246 aa5.24□□□□□ -1.57
CSDE1-216ENST00000534389 PRR14Q9BWN1 585 aa5.24□□□□□ -1.57
CSDE1-216ENST00000534389 TBC1D2Q9BYX2 928 aa5.24□□□□□ -1.57
CSDE1-216ENST00000534389 NISCHQ9Y2I1 1504 aa5.23□□□□□ -1.57
CSDE1-216ENST00000534389 KDM4AO75164 1064 aa5.23□□□□□ -1.57
CSDE1-216ENST00000534389 CLK2P49760 499 aaKnown RBP5.23□□□□□ -1.57
CSDE1-216ENST00000534389 SKIV2LQ15477 1246 aaKnown RBP5.23□□□□□ -1.57
CSDE1-216ENST00000534389 SH3D19Q5HYK7 790 aa5.23□□□□□ -1.57
CSDE1-216ENST00000534389 TSC1Q92574 1164 aa5.23□□□□□ -1.57
CSDE1-216ENST00000534389 HPS5Q9UPZ3 1129 aa5.23□□□□□ -1.57
CSDE1-216ENST00000534389 PTPN5P54829 565 aa5.22□□□□□ -1.57
CSDE1-216ENST00000534389 USP46P62068 366 aa5.22□□□□□ -1.57
CSDE1-216ENST00000534389 RIC3Q7Z5B4 369 aa5.22□□□□□ -1.57
CSDE1-216ENST00000534389 GCGRP47871 477 aa5.21□□□□□ -1.58
CSDE1-216ENST00000534389 MYSM1Q5VVJ2 828 aa5.21□□□□□ -1.58
CSDE1-216ENST00000534389 SPIRE2Q8WWL2 714 aa5.21□□□□□ -1.58
CSDE1-216ENST00000534389 GOPCQ9HD26 462 aa5.21□□□□□ -1.58
CSDE1-216ENST00000534389 TSR3Q9UJK0 312 aaKnown RBP5.21□□□□□ -1.58
CSDE1-216ENST00000534389 SLC10A3P09131 477 aa5.2□□□□□ -1.58
CSDE1-216ENST00000534389 WBP1LQ9NX94 342 aa5.2□□□□□ -1.58
CSDE1-216ENST00000534389 MOXD2PA6NHM9 499 aa5.19□□□□□ -1.58
CSDE1-216ENST00000534389 C6orf229H3BNL8 230 aa5.19□□□□□ -1.58
CSDE1-216ENST00000534389 FDX1P10109 184 aa5.19□□□□□ -1.58
CSDE1-216ENST00000534389 NDUFV2P19404 249 aa5.19□□□□□ -1.58
CSDE1-216ENST00000534389 HCSTQ9UBK5 93 aa5.19□□□□□ -1.58
CSDE1-216ENST00000534389 ATP6V1AP38606 617 aa5.18□□□□□ -1.58
CSDE1-216ENST00000534389 FUT2Q10981 343 aa5.18□□□□□ -1.58
CSDE1-216ENST00000534389 PROCA1Q8NCQ7 364 aaPredicted RBP5.18□□□□□ -1.58
CSDE1-216ENST00000534389 ZBTB3Q9H5J0 574 aa5.18□□□□□ -1.58
CSDE1-216ENST00000534389 HOXA2O43364 376 aa5.17□□□□□ -1.58
CSDE1-216ENST00000534389 APLP1P51693 650 aa5.17□□□□□ -1.58
CSDE1-216ENST00000534389 FLIIQ13045 1269 aa5.17□□□□□ -1.58
CSDE1-216ENST00000534389 Q3C1V9 767 aa5.17□□□□□ -1.58
CSDE1-216ENST00000534389 RSBN1LQ6PCB5 846 aaPredicted RBP5.17□□□□□ -1.58
CSDE1-216ENST00000534389 PCDHB3Q9Y5E6 796 aa5.17□□□□□ -1.58
CSDE1-216ENST00000534389 RAD21O60216 631 aa5.16□□□□□ -1.58
CSDE1-216ENST00000534389 NR1I2O75469 434 aa5.16□□□□□ -1.58
CSDE1-216ENST00000534389 AP1G2O75843 785 aa5.16□□□□□ -1.58
CSDE1-216ENST00000534389 PUS10Q3MIT2 529 aaKnown RBP5.16□□□□□ -1.58
CSDE1-216ENST00000534389 NYAP1Q6ZVC0 841 aa5.16□□□□□ -1.58
CSDE1-216ENST00000534389 HELBQ8NG08 1087 aaPredicted RBP5.16□□□□□ -1.58
CSDE1-216ENST00000534389 PRM3Q9NNZ6 103 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms