RNA–Protein interactions for RNA: ENST00000534086.1

AP003555.3-201, humanhuman

TSL 4 BASIC

Gene AP003555.3, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.3-201ENST00000534086 RIMS2Q9UQ26 1411 aa26.86■■□□□ 1.89
AP003555.3-201ENST00000534086 ZFYVE9O95405 1425 aa26.85■■□□□ 1.89
AP003555.3-201ENST00000534086 NAIPQ13075 1403 aa26.85■■□□□ 1.89
AP003555.3-201ENST00000534086 KCNA6P17658 529 aa26.84■■□□□ 1.89
AP003555.3-201ENST00000534086 SENP3Q9H4L4 574 aaPredicted RBP26.84■■□□□ 1.89
AP003555.3-201ENST00000534086 DISP3Q9P2K9 1392 aa26.84■■□□□ 1.89
AP003555.3-201ENST00000534086 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.83■■□□□ 1.89
AP003555.3-201ENST00000534086 HSPA1LP34931 641 aa26.81■■□□□ 1.88
AP003555.3-201ENST00000534086 PLEKHG1Q9ULL1 1385 aa26.81■■□□□ 1.88
AP003555.3-201ENST00000534086 ALKQ9UM73 1620 aa26.79■■□□□ 1.88
AP003555.3-201ENST00000534086 NUTM2DQ5VT03 806 aaPredicted RBP26.77■■□□□ 1.88
AP003555.3-201ENST00000534086 PROSER2Q86WR7 435 aaPredicted RBP26.77■■□□□ 1.88
AP003555.3-201ENST00000534086 HFM1A2PYH4 1435 aa26.76■■□□□ 1.87
AP003555.3-201ENST00000534086 TRIM52Q96A61 297 aa26.76■■□□□ 1.87
AP003555.3-201ENST00000534086 XIRP1Q702N8 1843 aaKnown RBP26.75■■□□□ 1.87
AP003555.3-201ENST00000534086 SPHKAPQ2M3C7 1700 aa26.75■■□□□ 1.87
AP003555.3-201ENST00000534086 TMEM94Q12767 1356 aa26.74■■□□□ 1.87
AP003555.3-201ENST00000534086 TBX22Q9Y458 520 aa26.74■■□□□ 1.87
AP003555.3-201ENST00000534086 RBM33Q96EV2 1170 aaKnown RBP26.71■■□□□ 1.87
AP003555.3-201ENST00000534086 NWD1Q149M9 1564 aa26.7■■□□□ 1.86
AP003555.3-201ENST00000534086 NKTRP30414 1462 aaKnown RBP26.69■■□□□ 1.86
AP003555.3-201ENST00000534086 ZNF326Q5BKZ1 582 aaKnown RBP26.69■■□□□ 1.86
AP003555.3-201ENST00000534086 CHD2O14647 1828 aaKnown RBP26.67■■□□□ 1.86
AP003555.3-201ENST00000534086 SLC4A1APQ9BWU0 796 aaKnown RBP26.66■■□□□ 1.86
AP003555.3-201ENST00000534086 ADAMTS13Q76LX8 1427 aa26.65■■□□□ 1.86
AP003555.3-201ENST00000534086 TRPM2O94759 1503 aa26.64■■□□□ 1.85
AP003555.3-201ENST00000534086 ILDR2Q71H61 639 aa26.63■■□□□ 1.85
AP003555.3-201ENST00000534086 DIP2AQ14689 1571 aa26.63■■□□□ 1.85
AP003555.3-201ENST00000534086 CLTCL1P53675 1640 aa26.62■■□□□ 1.85
AP003555.3-201ENST00000534086 PIK3R4Q99570 1358 aa26.61■■□□□ 1.85
AP003555.3-201ENST00000534086 MSH6P52701 1360 aa26.6■■□□□ 1.85
AP003555.3-201ENST00000534086 FAM135BQ49AJ0 1406 aa26.58■■□□□ 1.85
AP003555.3-201ENST00000534086 KIF1BO60333 1816 aa26.57■■□□□ 1.84
AP003555.3-201ENST00000534086 AMOTL2Q9Y2J4 779 aa26.55■■□□□ 1.84
AP003555.3-201ENST00000534086 C14orf37Q86TY3 774 aa26.54■■□□□ 1.84
AP003555.3-201ENST00000534086 NCOA3Q9Y6Q9 1424 aa26.54■■□□□ 1.84
AP003555.3-201ENST00000534086 SETBP1Q9Y6X0 1596 aa26.53■■□□□ 1.84
AP003555.3-201ENST00000534086 MED1Q15648 1581 aaPredicted RBP26.52■■□□□ 1.84
AP003555.3-201ENST00000534086 NEXMIFQ5QGS0 1516 aa26.52■■□□□ 1.84
AP003555.3-201ENST00000534086 SLAIN2Q9P270 581 aa26.52■■□□□ 1.84
AP003555.3-201ENST00000534086 NRXN3Q9Y4C0 1643 aa26.51■■□□□ 1.83
AP003555.3-201ENST00000534086 PTPRUQ92729 1446 aa26.51■■□□□ 1.83
AP003555.3-201ENST00000534086 FOXD1Q16676 465 aa26.51■■□□□ 1.83
AP003555.3-201ENST00000534086 MPHOSPH9Q99550 1183 aa26.49■■□□□ 1.83
AP003555.3-201ENST00000534086 ROBO1Q9Y6N7 1651 aa26.48■■□□□ 1.83
AP003555.3-201ENST00000534086 VGFO15240 615 aaPredicted RBP26.48■■□□□ 1.83
AP003555.3-201ENST00000534086 C19orf44Q9H6X5 657 aa26.48■■□□□ 1.83
AP003555.3-201ENST00000534086 METP08581 1390 aa26.46■■□□□ 1.83
AP003555.3-201ENST00000534086 RPGRIP1LQ68CZ1 1315 aa26.46■■□□□ 1.83
AP003555.3-201ENST00000534086 ACIN1Q9UKV3 1341 aaKnown RBP26.45■■□□□ 1.83
AP003555.3-201ENST00000534086 ATF3P18847 181 aa26.45■■□□□ 1.82
AP003555.3-201ENST00000534086 CADPS2Q86UW7 1296 aa26.45■■□□□ 1.82
AP003555.3-201ENST00000534086 SETD5Q9C0A6 1442 aa26.44■■□□□ 1.82
AP003555.3-201ENST00000534086 PHF23Q9BUL5 403 aaPredicted RBP26.42■■□□□ 1.82
AP003555.3-201ENST00000534086 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.42■■□□□ 1.82
AP003555.3-201ENST00000534086 SOCS7O14512 581 aa26.41■■□□□ 1.82
AP003555.3-201ENST00000534086 XRN1Q8IZH2 1706 aaKnown RBP26.41■■□□□ 1.82
AP003555.3-201ENST00000534086 CCDC144AA2RUR9 1427 aa26.4■■□□□ 1.82
AP003555.3-201ENST00000534086 RGL3Q3MIN7 710 aa26.36■■□□□ 1.81
AP003555.3-201ENST00000534086 PPLO60437 1756 aa26.35■■□□□ 1.81
AP003555.3-201ENST00000534086 PHLPP1O60346 1717 aa26.34■■□□□ 1.81
AP003555.3-201ENST00000534086 RAB3GAP2Q9H2M9 1393 aa26.33■■□□□ 1.8
AP003555.3-201ENST00000534086 DCCP43146 1447 aa26.32■■□□□ 1.8
AP003555.3-201ENST00000534086 SPATA31E1Q6ZUB1 1445 aa26.31■■□□□ 1.8
AP003555.3-201ENST00000534086 SETD1AO15047 1707 aaKnown RBP26.29■■□□□ 1.8
AP003555.3-201ENST00000534086 ADGRF5Q8IZF2 1346 aa26.29■■□□□ 1.8
AP003555.3-201ENST00000534086 BRINP3Q76B58 766 aa26.27■■□□□ 1.8
AP003555.3-201ENST00000534086 ANKRD30BQ9BXX2 1392 aa26.27■■□□□ 1.8
AP003555.3-201ENST00000534086 JCADQ9P266 1359 aa26.27■■□□□ 1.8
AP003555.3-201ENST00000534086 ADGRL3Q9HAR2 1447 aa26.27■■□□□ 1.8
AP003555.3-201ENST00000534086 PTCH1Q13635 1447 aa26.25■■□□□ 1.79
AP003555.3-201ENST00000534086 ROBO2Q9HCK4 1378 aa26.24■■□□□ 1.79
AP003555.3-201ENST00000534086 COL16A1Q07092 1604 aaPredicted RBP26.24■■□□□ 1.79
AP003555.3-201ENST00000534086 MST1RQ04912 1400 aa26.23■■□□□ 1.79
AP003555.3-201ENST00000534086 AHDC1Q5TGY3 1603 aaPredicted RBP26.22■■□□□ 1.79
AP003555.3-201ENST00000534086 RGS17Q9UGC6 210 aaPredicted RBP26.22■■□□□ 1.79
AP003555.3-201ENST00000534086 NALCNQ8IZF0 1738 aa26.22■■□□□ 1.79
AP003555.3-201ENST00000534086 IFT172Q9UG01 1749 aa26.2■■□□□ 1.79
AP003555.3-201ENST00000534086 PRAG1Q86YV5 1406 aa26.2■■□□□ 1.78
AP003555.3-201ENST00000534086 ASXL1Q8IXJ9 1541 aa26.18■■□□□ 1.78
AP003555.3-201ENST00000534086 HRCP23327 699 aa26.17■■□□□ 1.78
AP003555.3-201ENST00000534086 STK26Q9P289 416 aa26.17■■□□□ 1.78
AP003555.3-201ENST00000534086 SPATA31A6Q5VVP1 1343 aa26.15■■□□□ 1.78
AP003555.3-201ENST00000534086 TMEM132EQ6IEE7 984 aa26.15■■□□□ 1.78
AP003555.3-201ENST00000534086 PIK3C2GO75747 1445 aa26.14■■□□□ 1.78
AP003555.3-201ENST00000534086 C1orf167Q5SNV9 1468 aa26.13■■□□□ 1.77
AP003555.3-201ENST00000534086 LRPPRCP42704 1394 aaKnown RBP26.12■■□□□ 1.77
AP003555.3-201ENST00000534086 DDX17Q92841 729 aaKnown RBP26.1■■□□□ 1.77
AP003555.3-201ENST00000534086 LRRC59Q96AG4 307 aaKnown RBP26.1■■□□□ 1.77
AP003555.3-201ENST00000534086 C14orf93Q9H972 538 aaKnown RBP26.1■■□□□ 1.77
AP003555.3-201ENST00000534086 NHSL1Q5SYE7 1610 aa26.1■■□□□ 1.77
AP003555.3-201ENST00000534086 SHPRHQ149N8 1683 aa26.09■■□□□ 1.77
AP003555.3-201ENST00000534086 ABCC11Q96J66 1382 aa26.09■■□□□ 1.77
AP003555.3-201ENST00000534086 MEX3CQ5U5Q3 659 aaKnown RBP26.09■■□□□ 1.77
AP003555.3-201ENST00000534086 POTEAQ6S8J7 498 aa26.09■■□□□ 1.77
AP003555.3-201ENST00000534086 WAPLQ7Z5K2 1190 aa26.09■■□□□ 1.77
AP003555.3-201ENST00000534086 TECPR2O15040 1411 aa26.08■■□□□ 1.77
AP003555.3-201ENST00000534086 ORAI2Q96SN7 254 aa26.08■■□□□ 1.77
AP003555.3-201ENST00000534086 MYOM2P54296 1465 aa26.06■■□□□ 1.76
AP003555.3-201ENST00000534086 CFAP70Q5T0N1 1121 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms