RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 BCANQ96GW7 911 aa27.89■■■□□ 2.06
UBXN1-216ENST00000533908 RGS17Q9UGC6 210 aaPredicted RBP27.89■■■□□ 2.06
UBXN1-216ENST00000533908 MYO5BQ9ULV0 1848 aa27.88■■■□□ 2.05
UBXN1-216ENST00000533908 TMEM131LA2VDJ0 1609 aa27.85■■■□□ 2.05
UBXN1-216ENST00000533908 RIMS2Q9UQ26 1411 aa27.85■■■□□ 2.05
UBXN1-216ENST00000533908 UNC13BO14795 1591 aa27.85■■■□□ 2.05
UBXN1-216ENST00000533908 NWD1Q149M9 1564 aa27.85■■■□□ 2.05
UBXN1-216ENST00000533908 PLEKHG1Q9ULL1 1385 aa27.84■■■□□ 2.05
UBXN1-216ENST00000533908 GCC2Q8IWJ2 1684 aa27.83■■■□□ 2.05
UBXN1-216ENST00000533908 NKTRP30414 1462 aaKnown RBP27.82■■■□□ 2.04
UBXN1-216ENST00000533908 ROCK1Q13464 1354 aa27.81■■■□□ 2.04
UBXN1-216ENST00000533908 E9PCH4 1651 aa27.81■■■□□ 2.04
UBXN1-216ENST00000533908 CHGAP10645 457 aaKnown RBP27.8■■■□□ 2.04
UBXN1-216ENST00000533908 NUTM2DQ5VT03 806 aaPredicted RBP27.8■■■□□ 2.04
UBXN1-216ENST00000533908 ROBO1Q9Y6N7 1651 aa27.79■■■□□ 2.04
UBXN1-216ENST00000533908 PPP1R15AO75807 674 aaPredicted RBP27.79■■■□□ 2.04
UBXN1-216ENST00000533908 HDGFP51858 240 aaKnown RBP27.78■■■□□ 2.04
UBXN1-216ENST00000533908 PPARGC1BQ86YN6 1023 aaKnown RBP27.78■■■□□ 2.04
UBXN1-216ENST00000533908 TBX22Q9Y458 520 aa27.78■■■□□ 2.04
UBXN1-216ENST00000533908 CHD2O14647 1828 aaKnown RBP27.78■■■□□ 2.04
UBXN1-216ENST00000533908 ITGAEP38570 1179 aa27.76■■■□□ 2.03
UBXN1-216ENST00000533908 SLAIN2Q9P270 581 aa27.76■■■□□ 2.03
UBXN1-216ENST00000533908 MSH6P52701 1360 aa27.75■■■□□ 2.03
UBXN1-216ENST00000533908 ADAMTS13Q76LX8 1427 aa27.74■■■□□ 2.03
UBXN1-216ENST00000533908 IQGAP3Q86VI3 1631 aa27.74■■■□□ 2.03
UBXN1-216ENST00000533908 NUP155O75694 1391 aa27.73■■■□□ 2.03
UBXN1-216ENST00000533908 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.73■■■□□ 2.03
UBXN1-216ENST00000533908 POTEAQ6S8J7 498 aa27.69■■■□□ 2.02
UBXN1-216ENST00000533908 NCOA3Q9Y6Q9 1424 aa27.64■■■□□ 2.02
UBXN1-216ENST00000533908 PTPRUQ92729 1446 aa27.62■■■□□ 2.01
UBXN1-216ENST00000533908 PIK3R4Q99570 1358 aa27.61■■■□□ 2.01
UBXN1-216ENST00000533908 PHLPP1O60346 1717 aa27.61■■■□□ 2.01
UBXN1-216ENST00000533908 C14orf37Q86TY3 774 aa27.6■■■□□ 2.01
UBXN1-216ENST00000533908 AMOTL2Q9Y2J4 779 aa27.6■■■□□ 2.01
UBXN1-216ENST00000533908 C19orf44Q9H6X5 657 aa27.59■■■□□ 2.01
UBXN1-216ENST00000533908 DIP2AQ14689 1571 aa27.59■■■□□ 2.01
UBXN1-216ENST00000533908 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.57■■■□□ 2
UBXN1-216ENST00000533908 JCADQ9P266 1359 aa27.57■■■□□ 2
UBXN1-216ENST00000533908 COL16A1Q07092 1604 aaPredicted RBP27.56■■■□□ 2
UBXN1-216ENST00000533908 TRPM2O94759 1503 aa27.54■■■□□ 2
UBXN1-216ENST00000533908 CADPS2Q86UW7 1296 aa27.54■■■□□ 2
UBXN1-216ENST00000533908 ATF3P18847 181 aa27.53■■■□□ 2
UBXN1-216ENST00000533908 NRXN3Q9Y4C0 1643 aa27.52■■■□□ 2
UBXN1-216ENST00000533908 SPHKAPQ2M3C7 1700 aa27.51■■□□□ 1.99
UBXN1-216ENST00000533908 ZNF326Q5BKZ1 582 aaKnown RBP27.5■■□□□ 1.99
UBXN1-216ENST00000533908 METP08581 1390 aa27.49■■□□□ 1.99
UBXN1-216ENST00000533908 BRINP3Q76B58 766 aa27.48■■□□□ 1.99
UBXN1-216ENST00000533908 SETBP1Q9Y6X0 1596 aa27.48■■□□□ 1.99
UBXN1-216ENST00000533908 LRP6O75581 1613 aa27.47■■□□□ 1.99
UBXN1-216ENST00000533908 AHDC1Q5TGY3 1603 aaPredicted RBP27.46■■□□□ 1.99
UBXN1-216ENST00000533908 XRN1Q8IZH2 1706 aaKnown RBP27.45■■□□□ 1.99
UBXN1-216ENST00000533908 RRBP1Q9P2E9 1410 aaKnown RBP27.45■■□□□ 1.98
UBXN1-216ENST00000533908 CLTCL1P53675 1640 aa27.45■■□□□ 1.98
UBXN1-216ENST00000533908 NAIPQ13075 1403 aa27.44■■□□□ 1.98
UBXN1-216ENST00000533908 SPATA31A6Q5VVP1 1343 aa27.43■■□□□ 1.98
UBXN1-216ENST00000533908 NEXMIFQ5QGS0 1516 aa27.41■■□□□ 1.98
UBXN1-216ENST00000533908 DCCP43146 1447 aa27.39■■□□□ 1.97
UBXN1-216ENST00000533908 MST1RQ04912 1400 aa27.38■■□□□ 1.97
UBXN1-216ENST00000533908 SHPRHQ149N8 1683 aa27.36■■□□□ 1.97
UBXN1-216ENST00000533908 MEX3CQ5U5Q3 659 aaKnown RBP27.35■■□□□ 1.97
UBXN1-216ENST00000533908 SETD1AO15047 1707 aaKnown RBP27.35■■□□□ 1.97
UBXN1-216ENST00000533908 ASXL1Q8IXJ9 1541 aa27.35■■□□□ 1.97
UBXN1-216ENST00000533908 DDX17Q92841 729 aaKnown RBP27.34■■□□□ 1.97
UBXN1-216ENST00000533908 NUTM2BA6NNL0 878 aaPredicted RBP27.33■■□□□ 1.97
UBXN1-216ENST00000533908 NUTM2EB1AL46 878 aaPredicted RBP27.33■■□□□ 1.97
UBXN1-216ENST00000533908 NUTM2AQ8IVF1 878 aaPredicted RBP27.33■■□□□ 1.97
UBXN1-216ENST00000533908 TRIM52Q96A61 297 aa27.32■■□□□ 1.96
UBXN1-216ENST00000533908 ADGRL3Q9HAR2 1447 aa27.31■■□□□ 1.96
UBXN1-216ENST00000533908 KIF1BO60333 1816 aa27.3■■□□□ 1.96
UBXN1-216ENST00000533908 ZNF772Q68DY9 489 aaPredicted RBP27.3■■□□□ 1.96
UBXN1-216ENST00000533908 SETD5Q9C0A6 1442 aa27.3■■□□□ 1.96
UBXN1-216ENST00000533908 NALCNQ8IZF0 1738 aa27.27■■□□□ 1.96
UBXN1-216ENST00000533908 NHSL1Q5SYE7 1610 aa27.27■■□□□ 1.96
UBXN1-216ENST00000533908 HFM1A2PYH4 1435 aa27.27■■□□□ 1.96
UBXN1-216ENST00000533908 VGFO15240 615 aaPredicted RBP27.27■■□□□ 1.96
UBXN1-216ENST00000533908 SLC4A1APQ9BWU0 796 aaKnown RBP27.26■■□□□ 1.95
UBXN1-216ENST00000533908 LRRC59Q96AG4 307 aaKnown RBP27.25■■□□□ 1.95
UBXN1-216ENST00000533908 ROBO2Q9HCK4 1378 aa27.24■■□□□ 1.95
UBXN1-216ENST00000533908 FOXD1Q16676 465 aa27.22■■□□□ 1.95
UBXN1-216ENST00000533908 RPGRIP1LQ68CZ1 1315 aa27.21■■□□□ 1.95
UBXN1-216ENST00000533908 C1orf167Q5SNV9 1468 aa27.21■■□□□ 1.95
UBXN1-216ENST00000533908 AFF2P51816 1311 aa27.2■■□□□ 1.95
UBXN1-216ENST00000533908 RXRBP28702 533 aa27.2■■□□□ 1.94
UBXN1-216ENST00000533908 ORAI2Q96SN7 254 aa27.2■■□□□ 1.94
UBXN1-216ENST00000533908 PNPLA6Q8IY17 1366 aa27.2■■□□□ 1.94
UBXN1-216ENST00000533908 UPF1Q92900 1129 aaKnown RBP eCLIP27.19■■□□□ 1.94
UBXN1-216ENST00000533908 PTCH1Q13635 1447 aa27.18■■□□□ 1.94
UBXN1-216ENST00000533908 PPLO60437 1756 aa27.14■■□□□ 1.94
UBXN1-216ENST00000533908 PRAG1Q86YV5 1406 aa27.14■■□□□ 1.93
UBXN1-216ENST00000533908 C8orf37Q96NL8 207 aa27.13■■□□□ 1.93
UBXN1-216ENST00000533908 SOS2Q07890 1332 aaPredicted RBP27.13■■□□□ 1.93
UBXN1-216ENST00000533908 ADGRF5Q8IZF2 1346 aa27.12■■□□□ 1.93
UBXN1-216ENST00000533908 LAMC1P11047 1609 aa27.11■■□□□ 1.93
UBXN1-216ENST00000533908 QTRT2Q9H974 415 aaKnown RBP27.1■■□□□ 1.93
UBXN1-216ENST00000533908 ADAMTS2O95450 1211 aa27.09■■□□□ 1.93
UBXN1-216ENST00000533908 RGL3Q3MIN7 710 aa27.09■■□□□ 1.93
UBXN1-216ENST00000533908 CDK12Q9NYV4 1490 aaPredicted RBP27.08■■□□□ 1.93
UBXN1-216ENST00000533908 MPHOSPH9Q99550 1183 aa27.06■■□□□ 1.92
UBXN1-216ENST00000533908 SPATA31E1Q6ZUB1 1445 aa27.06■■□□□ 1.92
UBXN1-216ENST00000533908 NGLY1Q96IV0 654 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms