RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 ANKRD30BQ9BXX2 1392 aa29.03■■■□□ 2.24
CHEK1-215ENST00000533778 NEURL4Q96JN8 1562 aa29.03■■■□□ 2.24
CHEK1-215ENST00000533778 POLR1AO95602 1720 aaPredicted RBP29.03■■■□□ 2.24
CHEK1-215ENST00000533778 PCGF6Q9BYE7 350 aa29.02■■■□□ 2.24
CHEK1-215ENST00000533778 RPGRIP1LQ68CZ1 1315 aa29.01■■■□□ 2.23
CHEK1-215ENST00000533778 BCANQ96GW7 911 aa28.99■■■□□ 2.23
CHEK1-215ENST00000533778 PLEKHG1Q9ULL1 1385 aa28.97■■■□□ 2.23
CHEK1-215ENST00000533778 NUTM2DQ5VT03 806 aaPredicted RBP28.96■■■□□ 2.23
CHEK1-215ENST00000533778 KIF1BO60333 1816 aa28.96■■■□□ 2.23
CHEK1-215ENST00000533778 IQGAP1P46940 1657 aa28.94■■■□□ 2.22
CHEK1-215ENST00000533778 VGFO15240 615 aaPredicted RBP28.94■■■□□ 2.22
CHEK1-215ENST00000533778 MYO5BQ9ULV0 1848 aa28.93■■■□□ 2.22
CHEK1-215ENST00000533778 RGL3Q3MIN7 710 aa28.93■■■□□ 2.22
CHEK1-215ENST00000533778 SPATA31E1Q6ZUB1 1445 aa28.93■■■□□ 2.22
CHEK1-215ENST00000533778 ZNF335Q9H4Z2 1342 aaPredicted RBP28.89■■■□□ 2.21
CHEK1-215ENST00000533778 DHX57Q6P158 1386 aaKnown RBP28.88■■■□□ 2.21
CHEK1-215ENST00000533778 SLC26A8Q96RN1 970 aa28.88■■■□□ 2.21
CHEK1-215ENST00000533778 TBX22Q9Y458 520 aa28.87■■■□□ 2.21
CHEK1-215ENST00000533778 NEXMIFQ5QGS0 1516 aa28.87■■■□□ 2.21
CHEK1-215ENST00000533778 SENP3Q9H4L4 574 aaPredicted RBP28.84■■■□□ 2.21
CHEK1-215ENST00000533778 CERKQ8TCT0 537 aa28.79■■■□□ 2.2
CHEK1-215ENST00000533778 STAC3Q96MF2 364 aa28.79■■■□□ 2.2
CHEK1-215ENST00000533778 ADAMTS13Q76LX8 1427 aa28.78■■■□□ 2.2
CHEK1-215ENST00000533778 KCNA6P17658 529 aa28.78■■■□□ 2.2
CHEK1-215ENST00000533778 LTBP4Q8N2S1 1624 aa28.77■■■□□ 2.2
CHEK1-215ENST00000533778 DIP2AQ14689 1571 aa28.76■■■□□ 2.19
CHEK1-215ENST00000533778 SETBP1Q9Y6X0 1596 aa28.76■■■□□ 2.19
CHEK1-215ENST00000533778 CPS1P31327 1500 aa28.76■■■□□ 2.19
CHEK1-215ENST00000533778 PIK3R4Q99570 1358 aa28.75■■■□□ 2.19
CHEK1-215ENST00000533778 ADGRF5Q8IZF2 1346 aa28.74■■■□□ 2.19
CHEK1-215ENST00000533778 DCAF11Q8TEB1 546 aa28.72■■■□□ 2.19
CHEK1-215ENST00000533778 PPLO60437 1756 aa28.72■■■□□ 2.19
CHEK1-215ENST00000533778 SIN3AQ96ST3 1273 aa28.7■■■□□ 2.18
CHEK1-215ENST00000533778 NEUROD1Q13562 356 aa28.69■■■□□ 2.18
CHEK1-215ENST00000533778 MYOM2P54296 1465 aa28.69■■■□□ 2.18
CHEK1-215ENST00000533778 KDM2AQ9Y2K7 1162 aa28.68■■■□□ 2.18
CHEK1-215ENST00000533778 IQSEC2Q5JU85 1478 aa28.66■■■□□ 2.18
CHEK1-215ENST00000533778 NRXN3Q9Y4C0 1643 aa28.65■■■□□ 2.18
CHEK1-215ENST00000533778 METP08581 1390 aa28.65■■■□□ 2.18
CHEK1-215ENST00000533778 AMOTL2Q9Y2J4 779 aa28.65■■■□□ 2.18
CHEK1-215ENST00000533778 PIK3C2GO75747 1445 aa28.65■■■□□ 2.18
CHEK1-215ENST00000533778 IFT172Q9UG01 1749 aa28.63■■■□□ 2.17
CHEK1-215ENST00000533778 PROSER2Q86WR7 435 aaPredicted RBP28.63■■■□□ 2.17
CHEK1-215ENST00000533778 NRXN1Q9ULB1 1477 aa28.63■■■□□ 2.17
CHEK1-215ENST00000533778 ALKQ9UM73 1620 aa28.62■■■□□ 2.17
CHEK1-215ENST00000533778 NKTRP30414 1462 aaKnown RBP28.62■■■□□ 2.17
CHEK1-215ENST00000533778 C14orf93Q9H972 538 aaKnown RBP28.61■■■□□ 2.17
CHEK1-215ENST00000533778 NWD1Q149M9 1564 aa28.61■■■□□ 2.17
CHEK1-215ENST00000533778 LRRC7Q96NW7 1537 aa28.6■■■□□ 2.17
CHEK1-215ENST00000533778 CLSPNQ9HAW4 1339 aa28.59■■■□□ 2.17
CHEK1-215ENST00000533778 L3MBTL2Q969R5 705 aa28.58■■■□□ 2.17
CHEK1-215ENST00000533778 PTPRUQ92729 1446 aa28.58■■■□□ 2.17
CHEK1-215ENST00000533778 STRCP1A6NGW2 1772 aa28.56■■■□□ 2.16
CHEK1-215ENST00000533778 CFAP70Q5T0N1 1121 aa28.56■■■□□ 2.16
CHEK1-215ENST00000533778 TMEM94Q12767 1356 aa28.55■■■□□ 2.16
CHEK1-215ENST00000533778 CHD2O14647 1828 aaKnown RBP28.55■■■□□ 2.16
CHEK1-215ENST00000533778 CCER1Q8TC90 406 aaPredicted RBP28.53■■■□□ 2.16
CHEK1-215ENST00000533778 FBXO41Q8TF61 875 aa28.53■■■□□ 2.16
CHEK1-215ENST00000533778 NCOA3Q9Y6Q9 1424 aa28.52■■■□□ 2.16
CHEK1-215ENST00000533778 TONSLQ96HA7 1378 aa28.52■■■□□ 2.16
CHEK1-215ENST00000533778 TOM1O60784 492 aa28.5■■■□□ 2.15
CHEK1-215ENST00000533778 TMEM132EQ6IEE7 984 aa28.5■■■□□ 2.15
CHEK1-215ENST00000533778 RBM33Q96EV2 1170 aaKnown RBP28.49■■■□□ 2.15
CHEK1-215ENST00000533778 LRPPRCP42704 1394 aaKnown RBP28.49■■■□□ 2.15
CHEK1-215ENST00000533778 LAMC1P11047 1609 aa28.48■■■□□ 2.15
CHEK1-215ENST00000533778 UBAP1LF5GYI3 381 aa28.48■■■□□ 2.15
CHEK1-215ENST00000533778 C14orf37Q86TY3 774 aa28.48■■■□□ 2.15
CHEK1-215ENST00000533778 SETD1AO15047 1707 aaKnown RBP28.47■■■□□ 2.15
CHEK1-215ENST00000533778 PRAG1Q86YV5 1406 aa28.47■■■□□ 2.15
CHEK1-215ENST00000533778 STK26Q9P289 416 aa28.47■■■□□ 2.15
CHEK1-215ENST00000533778 ABCC11Q96J66 1382 aa28.46■■■□□ 2.15
CHEK1-215ENST00000533778 XRN1Q8IZH2 1706 aaKnown RBP28.46■■■□□ 2.15
CHEK1-215ENST00000533778 PTCH1Q13635 1447 aa28.45■■■□□ 2.15
CHEK1-215ENST00000533778 MSH6P52701 1360 aa28.45■■■□□ 2.14
CHEK1-215ENST00000533778 YTHDC2Q9H6S0 1430 aaKnown RBP28.44■■■□□ 2.14
CHEK1-215ENST00000533778 SIRT1Q96EB6 747 aa28.43■■■□□ 2.14
CHEK1-215ENST00000533778 C19orf44Q9H6X5 657 aa28.43■■■□□ 2.14
CHEK1-215ENST00000533778 TIMELESSQ9UNS1 1208 aa28.42■■■□□ 2.14
CHEK1-215ENST00000533778 TECPR2O15040 1411 aa28.42■■■□□ 2.14
CHEK1-215ENST00000533778 ROBO2Q9HCK4 1378 aa28.41■■■□□ 2.14
CHEK1-215ENST00000533778 ASXL1Q8IXJ9 1541 aa28.4■■■□□ 2.14
CHEK1-215ENST00000533778 ATF3P18847 181 aa28.37■■■□□ 2.13
CHEK1-215ENST00000533778 CADPS2Q86UW7 1296 aa28.37■■■□□ 2.13
CHEK1-215ENST00000533778 ADGRB1O14514 1584 aa28.37■■■□□ 2.13
CHEK1-215ENST00000533778 FAM135BQ49AJ0 1406 aa28.35■■■□□ 2.13
CHEK1-215ENST00000533778 TRAK1Q9UPV9 953 aa28.34■■■□□ 2.13
CHEK1-215ENST00000533778 ILDR1Q86SU0 546 aaPredicted RBP28.33■■■□□ 2.13
CHEK1-215ENST00000533778 PIP4K2BP78356 416 aa28.32■■■□□ 2.12
CHEK1-215ENST00000533778 NBPF1Q3BBV0 1214 aa28.32■■■□□ 2.12
CHEK1-215ENST00000533778 WAPLQ7Z5K2 1190 aa28.32■■■□□ 2.12
CHEK1-215ENST00000533778 POGKQ9P215 609 aa28.32■■■□□ 2.12
CHEK1-215ENST00000533778 ADGRL3Q9HAR2 1447 aa28.32■■■□□ 2.12
CHEK1-215ENST00000533778 KIAA1210Q9ULL0 1709 aa28.32■■■□□ 2.12
CHEK1-215ENST00000533778 XIRP1Q702N8 1843 aaKnown RBP28.32■■■□□ 2.12
CHEK1-215ENST00000533778 SCAF1Q9H7N4 1312 aaKnown RBP28.31■■■□□ 2.12
CHEK1-215ENST00000533778 DCCP43146 1447 aa28.31■■■□□ 2.12
CHEK1-215ENST00000533778 PRAM1Q96QH2 718 aa28.3■■■□□ 2.12
CHEK1-215ENST00000533778 DLC1Q96QB1 1528 aa28.29■■■□□ 2.12
CHEK1-215ENST00000533778 SLAIN2Q9P270 581 aa28.29■■■□□ 2.12
CHEK1-215ENST00000533778 KNDC1Q76NI1 1749 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms