RNA–Protein interactions for RNA: ENST00000533678.1

RDX-214, Transcript of radixin, humanhuman

TSL 4

Gene RDX, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-214ENST00000533678 HSPA1LP34931 641 aa24.52■■□□□ 1.52
RDX-214ENST00000533678 HDGFP51858 240 aaKnown RBP24.52■■□□□ 1.52
RDX-214ENST00000533678 PIP4K2BP78356 416 aa24.51■■□□□ 1.51
RDX-214ENST00000533678 SLC4A1APQ9BWU0 796 aaKnown RBP24.48■■□□□ 1.51
RDX-214ENST00000533678 SETD5Q9C0A6 1442 aa24.48■■□□□ 1.51
RDX-214ENST00000533678 TOM1O60784 492 aa24.47■■□□□ 1.51
RDX-214ENST00000533678 ALKQ9UM73 1620 aa24.46■■□□□ 1.51
RDX-214ENST00000533678 TRPM2O94759 1503 aa24.45■■□□□ 1.51
RDX-214ENST00000533678 CHGAP10645 457 aaKnown RBP24.45■■□□□ 1.5
RDX-214ENST00000533678 ZFYVE9O95405 1425 aa24.44■■□□□ 1.5
RDX-214ENST00000533678 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.44■■□□□ 1.5
RDX-214ENST00000533678 RIMS2Q9UQ26 1411 aa24.43■■□□□ 1.5
RDX-214ENST00000533678 KIF1BO60333 1816 aa24.4■■□□□ 1.5
RDX-214ENST00000533678 MPHOSPH9Q99550 1183 aa24.39■■□□□ 1.49
RDX-214ENST00000533678 PLEKHG1Q9ULL1 1385 aa24.39■■□□□ 1.49
RDX-214ENST00000533678 STRCP1A6NGW2 1772 aa24.39■■□□□ 1.49
RDX-214ENST00000533678 CLTCL1P53675 1640 aa24.39■■□□□ 1.49
RDX-214ENST00000533678 PPP1R15AO75807 674 aaPredicted RBP24.38■■□□□ 1.49
RDX-214ENST00000533678 PHF23Q9BUL5 403 aaPredicted RBP24.37■■□□□ 1.49
RDX-214ENST00000533678 RAB3GAP2Q9H2M9 1393 aa24.36■■□□□ 1.49
RDX-214ENST00000533678 HRCP23327 699 aa24.35■■□□□ 1.49
RDX-214ENST00000533678 BCANQ96GW7 911 aa24.35■■□□□ 1.49
RDX-214ENST00000533678 LRRC7Q96NW7 1537 aa24.34■■□□□ 1.49
RDX-214ENST00000533678 ZNF326Q5BKZ1 582 aaKnown RBP24.31■■□□□ 1.48
RDX-214ENST00000533678 SLC26A8Q96RN1 970 aa24.31■■□□□ 1.48
RDX-214ENST00000533678 KCNA6P17658 529 aa24.29■■□□□ 1.48
RDX-214ENST00000533678 TBX22Q9Y458 520 aa24.29■■□□□ 1.48
RDX-214ENST00000533678 DIP2AQ14689 1571 aa24.29■■□□□ 1.48
RDX-214ENST00000533678 FOXD1Q16676 465 aa24.27■■□□□ 1.48
RDX-214ENST00000533678 NUTM2DQ5VT03 806 aaPredicted RBP24.26■■□□□ 1.47
RDX-214ENST00000533678 RPGRIP1LQ68CZ1 1315 aa24.26■■□□□ 1.47
RDX-214ENST00000533678 CHD2O14647 1828 aaKnown RBP24.26■■□□□ 1.47
RDX-214ENST00000533678 CCDC144AA2RUR9 1427 aa24.26■■□□□ 1.47
RDX-214ENST00000533678 NEXMIFQ5QGS0 1516 aa24.25■■□□□ 1.47
RDX-214ENST00000533678 NWD1Q149M9 1564 aa24.25■■□□□ 1.47
RDX-214ENST00000533678 SENP3Q9H4L4 574 aaPredicted RBP24.24■■□□□ 1.47
RDX-214ENST00000533678 PIK3R4Q99570 1358 aa24.24■■□□□ 1.47
RDX-214ENST00000533678 ADAMTS13Q76LX8 1427 aa24.23■■□□□ 1.47
RDX-214ENST00000533678 SETBP1Q9Y6X0 1596 aa24.22■■□□□ 1.47
RDX-214ENST00000533678 NKTRP30414 1462 aaKnown RBP24.21■■□□□ 1.47
RDX-214ENST00000533678 VGFO15240 615 aaPredicted RBP24.21■■□□□ 1.47
RDX-214ENST00000533678 XIRP1Q702N8 1843 aaKnown RBP24.19■■□□□ 1.46
RDX-214ENST00000533678 PPLO60437 1756 aa24.19■■□□□ 1.46
RDX-214ENST00000533678 NRXN3Q9Y4C0 1643 aa24.17■■□□□ 1.46
RDX-214ENST00000533678 PROSER2Q86WR7 435 aaPredicted RBP24.17■■□□□ 1.46
RDX-214ENST00000533678 SPATA31E1Q6ZUB1 1445 aa24.15■■□□□ 1.46
RDX-214ENST00000533678 TMEM94Q12767 1356 aa24.14■■□□□ 1.45
RDX-214ENST00000533678 NCOA3Q9Y6Q9 1424 aa24.11■■□□□ 1.45
RDX-214ENST00000533678 IFT172Q9UG01 1749 aa24.1■■□□□ 1.45
RDX-214ENST00000533678 ANKRD30BQ9BXX2 1392 aa24.1■■□□□ 1.45
RDX-214ENST00000533678 RGL3Q3MIN7 710 aa24.09■■□□□ 1.45
RDX-214ENST00000533678 AMOTL2Q9Y2J4 779 aa24.08■■□□□ 1.45
RDX-214ENST00000533678 PTPRUQ92729 1446 aa24.06■■□□□ 1.44
RDX-214ENST00000533678 XRN1Q8IZH2 1706 aaKnown RBP24.06■■□□□ 1.44
RDX-214ENST00000533678 METP08581 1390 aa24.05■■□□□ 1.44
RDX-214ENST00000533678 MSH6P52701 1360 aa24.05■■□□□ 1.44
RDX-214ENST00000533678 ROBO1Q9Y6N7 1651 aa24.05■■□□□ 1.44
RDX-214ENST00000533678 SETD1AO15047 1707 aaKnown RBP24.04■■□□□ 1.44
RDX-214ENST00000533678 RBM33Q96EV2 1170 aaKnown RBP24.02■■□□□ 1.44
RDX-214ENST00000533678 RGS17Q9UGC6 210 aaPredicted RBP24.02■■□□□ 1.44
RDX-214ENST00000533678 FAM135BQ49AJ0 1406 aa24.01■■□□□ 1.43
RDX-214ENST00000533678 ADGRF5Q8IZF2 1346 aa24.01■■□□□ 1.43
RDX-214ENST00000533678 C14orf37Q86TY3 774 aa23.98■■□□□ 1.43
RDX-214ENST00000533678 C19orf44Q9H6X5 657 aa23.98■■□□□ 1.43
RDX-214ENST00000533678 MYOM2P54296 1465 aa23.97■■□□□ 1.43
RDX-214ENST00000533678 TRIM26Q12899 539 aaPredicted RBP23.97■■□□□ 1.43
RDX-214ENST00000533678 PIK3C2GO75747 1445 aa23.96■■□□□ 1.43
RDX-214ENST00000533678 PRAG1Q86YV5 1406 aa23.96■■□□□ 1.43
RDX-214ENST00000533678 STAC3Q96MF2 364 aa23.96■■□□□ 1.43
RDX-214ENST00000533678 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.95■■□□□ 1.42
RDX-214ENST00000533678 NRXN1Q9ULB1 1477 aa23.94■■□□□ 1.42
RDX-214ENST00000533678 CADPS2Q86UW7 1296 aa23.94■■□□□ 1.42
RDX-214ENST00000533678 PTCH1Q13635 1447 aa23.93■■□□□ 1.42
RDX-214ENST00000533678 ATF3P18847 181 aa23.92■■□□□ 1.42
RDX-214ENST00000533678 SLAIN2Q9P270 581 aa23.92■■□□□ 1.42
RDX-214ENST00000533678 DCCP43146 1447 aa23.92■■□□□ 1.42
RDX-214ENST00000533678 LAMC1P11047 1609 aa23.92■■□□□ 1.42
RDX-214ENST00000533678 PHLPP1O60346 1717 aa23.91■■□□□ 1.42
RDX-214ENST00000533678 C14orf93Q9H972 538 aaKnown RBP23.9■■□□□ 1.42
RDX-214ENST00000533678 POTEAQ6S8J7 498 aa23.88■■□□□ 1.41
RDX-214ENST00000533678 ADGRL3Q9HAR2 1447 aa23.86■■□□□ 1.41
RDX-214ENST00000533678 DCAF11Q8TEB1 546 aa23.86■■□□□ 1.41
RDX-214ENST00000533678 KNDC1Q76NI1 1749 aa23.86■■□□□ 1.41
RDX-214ENST00000533678 LRPPRCP42704 1394 aaKnown RBP23.86■■□□□ 1.41
RDX-214ENST00000533678 ROBO2Q9HCK4 1378 aa23.86■■□□□ 1.41
RDX-214ENST00000533678 ABCC11Q96J66 1382 aa23.85■■□□□ 1.41
RDX-214ENST00000533678 TECPR2O15040 1411 aa23.84■■□□□ 1.41
RDX-214ENST00000533678 NALCNQ8IZF0 1738 aa23.84■■□□□ 1.41
RDX-214ENST00000533678 COL16A1Q07092 1604 aaPredicted RBP23.84■■□□□ 1.41
RDX-214ENST00000533678 DHX57Q6P158 1386 aaKnown RBP23.82■■□□□ 1.4
RDX-214ENST00000533678 CFAP70Q5T0N1 1121 aa23.82■■□□□ 1.4
RDX-214ENST00000533678 SIRT1Q96EB6 747 aa23.82■■□□□ 1.4
RDX-214ENST00000533678 ASXL1Q8IXJ9 1541 aa23.82■■□□□ 1.4
RDX-214ENST00000533678 YTHDC2Q9H6S0 1430 aaKnown RBP23.82■■□□□ 1.4
RDX-214ENST00000533678 TMEM132EQ6IEE7 984 aa23.81■■□□□ 1.4
RDX-214ENST00000533678 KDM2AQ9Y2K7 1162 aa23.81■■□□□ 1.4
RDX-214ENST00000533678 STK26Q9P289 416 aa23.8■■□□□ 1.4
RDX-214ENST00000533678 JCADQ9P266 1359 aa23.79■■□□□ 1.4
RDX-214ENST00000533678 MST1RQ04912 1400 aa23.77■■□□□ 1.4
RDX-214ENST00000533678 LRP6O75581 1613 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms