RNA–Protein interactions for RNA: ENST00000533656.1

VPS51-212, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 923 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-212ENST00000533656 CHGAP10645 457 aaKnown RBP31.78■■■□□ 2.68
VPS51-212ENST00000533656 CLSPNQ9HAW4 1339 aa31.77■■■□□ 2.68
VPS51-212ENST00000533656 UBAP1LF5GYI3 381 aa31.77■■■□□ 2.68
VPS51-212ENST00000533656 KIF1BO60333 1816 aa31.77■■■□□ 2.68
VPS51-212ENST00000533656 SLIT1O75093 1534 aa31.76■■■□□ 2.68
VPS51-212ENST00000533656 TMEM2Q9UHN6 1383 aa31.75■■■□□ 2.67
VPS51-212ENST00000533656 ARHGAP23Q9P227 1491 aa31.75■■■□□ 2.67
VPS51-212ENST00000533656 SPATA31E1Q6ZUB1 1445 aa31.73■■■□□ 2.67
VPS51-212ENST00000533656 HDGFP51858 240 aaKnown RBP31.72■■■□□ 2.67
VPS51-212ENST00000533656 SCAF11Q99590 1463 aaKnown RBP31.7■■■□□ 2.66
VPS51-212ENST00000533656 RPGRIP1LQ68CZ1 1315 aa31.7■■■□□ 2.66
VPS51-212ENST00000533656 ZNF326Q5BKZ1 582 aaKnown RBP31.68■■■□□ 2.66
VPS51-212ENST00000533656 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.68■■■□□ 2.66
VPS51-212ENST00000533656 EID1Q9Y6B2 187 aa31.68■■■□□ 2.66
VPS51-212ENST00000533656 ZFYVE9O95405 1425 aa31.66■■■□□ 2.66
VPS51-212ENST00000533656 RIMS2Q9UQ26 1411 aa31.66■■■□□ 2.66
VPS51-212ENST00000533656 ALKQ9UM73 1620 aa31.66■■■□□ 2.66
VPS51-212ENST00000533656 LTKP29376 864 aa31.65■■■□□ 2.66
VPS51-212ENST00000533656 CCER1Q8TC90 406 aaPredicted RBP31.65■■■□□ 2.66
VPS51-212ENST00000533656 DISP3Q9P2K9 1392 aa31.65■■■□□ 2.66
VPS51-212ENST00000533656 MYO5BQ9ULV0 1848 aa31.64■■■□□ 2.66
VPS51-212ENST00000533656 TXNDC2Q86VQ3 553 aa31.61■■■□□ 2.65
VPS51-212ENST00000533656 NEXMIFQ5QGS0 1516 aa31.6■■■□□ 2.65
VPS51-212ENST00000533656 LRRC7Q96NW7 1537 aa31.6■■■□□ 2.65
VPS51-212ENST00000533656 RGL3Q3MIN7 710 aa31.59■■■□□ 2.65
VPS51-212ENST00000533656 SIN3AQ96ST3 1273 aa31.59■■■□□ 2.65
VPS51-212ENST00000533656 XIRP1Q702N8 1843 aaKnown RBP31.59■■■□□ 2.65
VPS51-212ENST00000533656 STAC3Q96MF2 364 aa31.58■■■□□ 2.65
VPS51-212ENST00000533656 PPP1R15AO75807 674 aaPredicted RBP31.56■■■□□ 2.64
VPS51-212ENST00000533656 VGFO15240 615 aaPredicted RBP31.55■■■□□ 2.64
VPS51-212ENST00000533656 PIP4K2BP78356 416 aa31.55■■■□□ 2.64
VPS51-212ENST00000533656 NEUROD1Q13562 356 aa31.55■■■□□ 2.64
VPS51-212ENST00000533656 SCAF1Q9H7N4 1312 aaKnown RBP31.54■■■□□ 2.64
VPS51-212ENST00000533656 PLEKHG1Q9ULL1 1385 aa31.54■■■□□ 2.64
VPS51-212ENST00000533656 ILDR2Q71H61 639 aa31.53■■■□□ 2.64
VPS51-212ENST00000533656 MYOM2P54296 1465 aa31.52■■■□□ 2.64
VPS51-212ENST00000533656 PPLO60437 1756 aa31.51■■■□□ 2.64
VPS51-212ENST00000533656 IFT172Q9UG01 1749 aa31.5■■■□□ 2.63
VPS51-212ENST00000533656 TOM1O60784 492 aa31.49■■■□□ 2.63
VPS51-212ENST00000533656 TONSLQ96HA7 1378 aa31.47■■■□□ 2.63
VPS51-212ENST00000533656 HSPA1LP34931 641 aa31.47■■■□□ 2.63
VPS51-212ENST00000533656 NUTM2DQ5VT03 806 aaPredicted RBP31.45■■■□□ 2.63
VPS51-212ENST00000533656 TIMELESSQ9UNS1 1208 aa31.45■■■□□ 2.63
VPS51-212ENST00000533656 DCAF11Q8TEB1 546 aa31.44■■■□□ 2.62
VPS51-212ENST00000533656 SETBP1Q9Y6X0 1596 aa31.43■■■□□ 2.62
VPS51-212ENST00000533656 NRXN1Q9ULB1 1477 aa31.43■■■□□ 2.62
VPS51-212ENST00000533656 L3MBTL2Q969R5 705 aa31.41■■■□□ 2.62
VPS51-212ENST00000533656 DIP2AQ14689 1571 aa31.4■■■□□ 2.62
VPS51-212ENST00000533656 BCANQ96GW7 911 aa31.39■■■□□ 2.62
VPS51-212ENST00000533656 ADGRF5Q8IZF2 1346 aa31.39■■■□□ 2.62
VPS51-212ENST00000533656 PIK3C2GO75747 1445 aa31.39■■■□□ 2.62
VPS51-212ENST00000533656 MED1Q15648 1581 aaPredicted RBP31.36■■■□□ 2.61
VPS51-212ENST00000533656 ADAMTS13Q76LX8 1427 aa31.36■■■□□ 2.61
VPS51-212ENST00000533656 TBX22Q9Y458 520 aa31.36■■■□□ 2.61
VPS51-212ENST00000533656 SLC26A8Q96RN1 970 aa31.35■■■□□ 2.61
VPS51-212ENST00000533656 KDM2AQ9Y2K7 1162 aa31.35■■■□□ 2.61
VPS51-212ENST00000533656 NWD1Q149M9 1564 aa31.34■■■□□ 2.61
VPS51-212ENST00000533656 SENP3Q9H4L4 574 aaPredicted RBP31.34■■■□□ 2.61
VPS51-212ENST00000533656 NRXN3Q9Y4C0 1643 aa31.34■■■□□ 2.61
VPS51-212ENST00000533656 PIK3R4Q99570 1358 aa31.31■■■□□ 2.6
VPS51-212ENST00000533656 PRAG1Q86YV5 1406 aa31.3■■■□□ 2.6
VPS51-212ENST00000533656 LAMC1P11047 1609 aa31.29■■■□□ 2.6
VPS51-212ENST00000533656 CHD2O14647 1828 aaKnown RBP31.28■■■□□ 2.6
VPS51-212ENST00000533656 C14orf93Q9H972 538 aaKnown RBP31.27■■■□□ 2.6
VPS51-212ENST00000533656 TMEM94Q12767 1356 aa31.27■■■□□ 2.6
VPS51-212ENST00000533656 KCNA6P17658 529 aa31.25■■■□□ 2.59
VPS51-212ENST00000533656 RBM33Q96EV2 1170 aaKnown RBP31.24■■■□□ 2.59
VPS51-212ENST00000533656 NKTRP30414 1462 aaKnown RBP31.23■■■□□ 2.59
VPS51-212ENST00000533656 SETD1AO15047 1707 aaKnown RBP31.21■■■□□ 2.59
VPS51-212ENST00000533656 KIAA1210Q9ULL0 1709 aa31.2■■■□□ 2.58
VPS51-212ENST00000533656 CFAP70Q5T0N1 1121 aa31.19■■■□□ 2.58
VPS51-212ENST00000533656 METP08581 1390 aa31.18■■■□□ 2.58
VPS51-212ENST00000533656 SOCS7O14512 581 aa31.18■■■□□ 2.58
VPS51-212ENST00000533656 ROBO1Q9Y6N7 1651 aa31.17■■■□□ 2.58
VPS51-212ENST00000533656 PROSER2Q86WR7 435 aaPredicted RBP31.16■■■□□ 2.58
VPS51-212ENST00000533656 ASXL1Q8IXJ9 1541 aa31.13■■■□□ 2.57
VPS51-212ENST00000533656 ADGRB1O14514 1584 aa31.12■■■□□ 2.57
VPS51-212ENST00000533656 NBPF8Q3BBV2 869 aa31.11■■■□□ 2.57
VPS51-212ENST00000533656 PTPRUQ92729 1446 aa31.11■■■□□ 2.57
VPS51-212ENST00000533656 TRPM1Q7Z4N2 1603 aa31.1■■■□□ 2.57
VPS51-212ENST00000533656 LRPPRCP42704 1394 aaKnown RBP31.1■■■□□ 2.57
VPS51-212ENST00000533656 RALGAPBQ86X10 1494 aa31.09■■■□□ 2.57
VPS51-212ENST00000533656 FAM135BQ49AJ0 1406 aa31.09■■■□□ 2.57
VPS51-212ENST00000533656 AMOTL2Q9Y2J4 779 aa31.09■■■□□ 2.57
VPS51-212ENST00000533656 XRN1Q8IZH2 1706 aaKnown RBP31.09■■■□□ 2.57
VPS51-212ENST00000533656 YTHDC2Q9H6S0 1430 aaKnown RBP31.08■■■□□ 2.57
VPS51-212ENST00000533656 TECPR2O15040 1411 aa31.07■■■□□ 2.57
VPS51-212ENST00000533656 ABCC11Q96J66 1382 aa31.07■■■□□ 2.56
VPS51-212ENST00000533656 TMEM132EQ6IEE7 984 aa31.07■■■□□ 2.56
VPS51-212ENST00000533656 PTCH1Q13635 1447 aa31.07■■■□□ 2.56
VPS51-212ENST00000533656 ROCK2O75116 1388 aaKnown RBP31.06■■■□□ 2.56
VPS51-212ENST00000533656 GPRASP1Q5JY77 1395 aa31.05■■■□□ 2.56
VPS51-212ENST00000533656 MSH6P52701 1360 aa31.03■■■□□ 2.56
VPS51-212ENST00000533656 KNDC1Q76NI1 1749 aa31.02■■■□□ 2.56
VPS51-212ENST00000533656 NBPF1Q3BBV0 1214 aa31.02■■■□□ 2.56
VPS51-212ENST00000533656 SIRT1Q96EB6 747 aa31.01■■■□□ 2.55
VPS51-212ENST00000533656 DLC1Q96QB1 1528 aa31.01■■■□□ 2.55
VPS51-212ENST00000533656 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.01■■■□□ 2.55
VPS51-212ENST00000533656 NCOA3Q9Y6Q9 1424 aa30.99■■■□□ 2.55
VPS51-212ENST00000533656 STK26Q9P289 416 aa30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms