RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 RGS17Q9UGC6 210 aaPredicted RBP13.45□□□□□ -0.26
COPB1-210ENST00000533533 ROBO1Q9Y6N7 1651 aa13.44□□□□□ -0.26
COPB1-210ENST00000533533 MYO5BQ9ULV0 1848 aa13.43□□□□□ -0.26
COPB1-210ENST00000533533 RBM33Q96EV2 1170 aaKnown RBP13.43□□□□□ -0.26
COPB1-210ENST00000533533 NKTRP30414 1462 aaKnown RBP13.42□□□□□ -0.26
COPB1-210ENST00000533533 RPRD2Q5VT52 1461 aaKnown RBP13.42□□□□□ -0.26
COPB1-210ENST00000533533 NWD1Q149M9 1564 aa13.42□□□□□ -0.26
COPB1-210ENST00000533533 ANKRD50Q9ULJ7 1429 aa13.41□□□□□ -0.26
COPB1-210ENST00000533533 FAM50AQ14320 339 aaKnown RBP13.41□□□□□ -0.26
COPB1-210ENST00000533533 BCANQ96GW7 911 aa13.41□□□□□ -0.26
COPB1-210ENST00000533533 CHD2O14647 1828 aaKnown RBP13.41□□□□□ -0.26
COPB1-210ENST00000533533 PPARGC1BQ86YN6 1023 aaKnown RBP13.4□□□□□ -0.26
COPB1-210ENST00000533533 ZFYVE9O95405 1425 aa13.39□□□□□ -0.27
COPB1-210ENST00000533533 MSH6P52701 1360 aa13.39□□□□□ -0.27
COPB1-210ENST00000533533 PLEKHG1Q9ULL1 1385 aa13.39□□□□□ -0.27
COPB1-210ENST00000533533 GCC2Q8IWJ2 1684 aa13.39□□□□□ -0.27
COPB1-210ENST00000533533 HDGFP51858 240 aaKnown RBP13.38□□□□□ -0.27
COPB1-210ENST00000533533 SLAIN2Q9P270 581 aa13.38□□□□□ -0.27
COPB1-210ENST00000533533 TMEM131LA2VDJ0 1609 aa13.38□□□□□ -0.27
COPB1-210ENST00000533533 RIMS2Q9UQ26 1411 aa13.38□□□□□ -0.27
COPB1-210ENST00000533533 PPP1R15AO75807 674 aaPredicted RBP13.37□□□□□ -0.27
COPB1-210ENST00000533533 POTEAQ6S8J7 498 aa13.36□□□□□ -0.27
COPB1-210ENST00000533533 PHLPP1O60346 1717 aa13.36□□□□□ -0.27
COPB1-210ENST00000533533 TBX22Q9Y458 520 aa13.35□□□□□ -0.27
COPB1-210ENST00000533533 UNC13BO14795 1591 aa13.35□□□□□ -0.27
COPB1-210ENST00000533533 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.34□□□□□ -0.27
COPB1-210ENST00000533533 E9PCH4 1651 aa13.34□□□□□ -0.27
COPB1-210ENST00000533533 CHGAP10645 457 aaKnown RBP13.33□□□□□ -0.28
COPB1-210ENST00000533533 JCADQ9P266 1359 aa13.32□□□□□ -0.28
COPB1-210ENST00000533533 NCOA3Q9Y6Q9 1424 aa13.32□□□□□ -0.28
COPB1-210ENST00000533533 ADAMTS13Q76LX8 1427 aa13.31□□□□□ -0.28
COPB1-210ENST00000533533 COL16A1Q07092 1604 aaPredicted RBP13.31□□□□□ -0.28
COPB1-210ENST00000533533 IQGAP3Q86VI3 1631 aa13.31□□□□□ -0.28
COPB1-210ENST00000533533 ROCK1Q13464 1354 aa13.31□□□□□ -0.28
COPB1-210ENST00000533533 DIP2AQ14689 1571 aa13.3□□□□□ -0.28
COPB1-210ENST00000533533 NUTM2DQ5VT03 806 aaPredicted RBP13.3□□□□□ -0.28
COPB1-210ENST00000533533 C14orf37Q86TY3 774 aa13.3□□□□□ -0.28
COPB1-210ENST00000533533 PIK3R4Q99570 1358 aa13.3□□□□□ -0.28
COPB1-210ENST00000533533 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.3□□□□□ -0.28
COPB1-210ENST00000533533 C19orf44Q9H6X5 657 aa13.29□□□□□ -0.28
COPB1-210ENST00000533533 CADPS2Q86UW7 1296 aa13.28□□□□□ -0.28
COPB1-210ENST00000533533 ATF3P18847 181 aa13.27□□□□□ -0.29
COPB1-210ENST00000533533 NUP155O75694 1391 aa13.27□□□□□ -0.29
COPB1-210ENST00000533533 SETD1AO15047 1707 aaKnown RBP13.27□□□□□ -0.29
COPB1-210ENST00000533533 TRPM2O94759 1503 aa13.26□□□□□ -0.29
COPB1-210ENST00000533533 AHDC1Q5TGY3 1603 aaPredicted RBP13.26□□□□□ -0.29
COPB1-210ENST00000533533 SPATA31A6Q5VVP1 1343 aa13.26□□□□□ -0.29
COPB1-210ENST00000533533 AMOTL2Q9Y2J4 779 aa13.25□□□□□ -0.29
COPB1-210ENST00000533533 SHPRHQ149N8 1683 aa13.24□□□□□ -0.29
COPB1-210ENST00000533533 LRP6O75581 1613 aa13.24□□□□□ -0.29
COPB1-210ENST00000533533 PTPRUQ92729 1446 aa13.24□□□□□ -0.29
COPB1-210ENST00000533533 SPHKAPQ2M3C7 1700 aa13.22□□□□□ -0.29
COPB1-210ENST00000533533 NRXN3Q9Y4C0 1643 aa13.22□□□□□ -0.29
COPB1-210ENST00000533533 ITGAEP38570 1179 aa13.22□□□□□ -0.29
COPB1-210ENST00000533533 MEX3CQ5U5Q3 659 aaKnown RBP13.22□□□□□ -0.29
COPB1-210ENST00000533533 ZNF772Q68DY9 489 aaPredicted RBP13.22□□□□□ -0.29
COPB1-210ENST00000533533 BRINP3Q76B58 766 aa13.22□□□□□ -0.29
COPB1-210ENST00000533533 DCCP43146 1447 aa13.22□□□□□ -0.29
COPB1-210ENST00000533533 XRN1Q8IZH2 1706 aaKnown RBP13.21□□□□□ -0.3
COPB1-210ENST00000533533 SETBP1Q9Y6X0 1596 aa13.2□□□□□ -0.3
COPB1-210ENST00000533533 ZNF326Q5BKZ1 582 aaKnown RBP13.19□□□□□ -0.3
COPB1-210ENST00000533533 ASXL1Q8IXJ9 1541 aa13.18□□□□□ -0.3
COPB1-210ENST00000533533 MST1RQ04912 1400 aa13.17□□□□□ -0.3
COPB1-210ENST00000533533 MAPK8IP2Q13387 824 aaPredicted RBP13.17□□□□□ -0.3
COPB1-210ENST00000533533 TRIM52Q96A61 297 aa13.17□□□□□ -0.3
COPB1-210ENST00000533533 METP08581 1390 aa13.17□□□□□ -0.3
COPB1-210ENST00000533533 NHSL1Q5SYE7 1610 aa13.17□□□□□ -0.3
COPB1-210ENST00000533533 SETD5Q9C0A6 1442 aa13.16□□□□□ -0.3
COPB1-210ENST00000533533 NUTM2BA6NNL0 878 aaPredicted RBP13.16□□□□□ -0.3
COPB1-210ENST00000533533 NUTM2EB1AL46 878 aaPredicted RBP13.16□□□□□ -0.3
COPB1-210ENST00000533533 NUTM2AQ8IVF1 878 aaPredicted RBP13.16□□□□□ -0.3
COPB1-210ENST00000533533 RXRBP28702 533 aa13.15□□□□□ -0.3
COPB1-210ENST00000533533 UPF1Q92900 1129 aaKnown RBP eCLIP13.15□□□□□ -0.3
COPB1-210ENST00000533533 KIF1BO60333 1816 aa13.15□□□□□ -0.3
COPB1-210ENST00000533533 ADGRL3Q9HAR2 1447 aa13.14□□□□□ -0.31
COPB1-210ENST00000533533 NEXMIFQ5QGS0 1516 aa13.14□□□□□ -0.31
COPB1-210ENST00000533533 CLTCL1P53675 1640 aa13.14□□□□□ -0.31
COPB1-210ENST00000533533 LRRC59Q96AG4 307 aaKnown RBP13.14□□□□□ -0.31
COPB1-210ENST00000533533 NALCNQ8IZF0 1738 aa13.13□□□□□ -0.31
COPB1-210ENST00000533533 AFF2P51816 1311 aa13.13□□□□□ -0.31
COPB1-210ENST00000533533 CDK12Q9NYV4 1490 aaPredicted RBP13.12□□□□□ -0.31
COPB1-210ENST00000533533 DDX17Q92841 729 aaKnown RBP13.11□□□□□ -0.31
COPB1-210ENST00000533533 PNPLA6Q8IY17 1366 aa13.1□□□□□ -0.31
COPB1-210ENST00000533533 NAIPQ13075 1403 aa13.09□□□□□ -0.31
COPB1-210ENST00000533533 C8orf37Q96NL8 207 aa13.09□□□□□ -0.31
COPB1-210ENST00000533533 PTCH1Q13635 1447 aa13.08□□□□□ -0.32
COPB1-210ENST00000533533 RRBP1Q9P2E9 1410 aaKnown RBP13.08□□□□□ -0.32
COPB1-210ENST00000533533 VGFO15240 615 aaPredicted RBP13.08□□□□□ -0.32
COPB1-210ENST00000533533 LAMC1P11047 1609 aa13.08□□□□□ -0.32
COPB1-210ENST00000533533 C1orf167Q5SNV9 1468 aa13.08□□□□□ -0.32
COPB1-210ENST00000533533 SRCAPQ6ZRS2 3230 aa13.08□□□□□ -0.32
COPB1-210ENST00000533533 RBM6P78332 1123 aaKnown RBP13.07□□□□□ -0.32
COPB1-210ENST00000533533 QTRT2Q9H974 415 aaKnown RBP13.07□□□□□ -0.32
COPB1-210ENST00000533533 ROBO2Q9HCK4 1378 aa13.07□□□□□ -0.32
COPB1-210ENST00000533533 NGLY1Q96IV0 654 aa13.05□□□□□ -0.32
COPB1-210ENST00000533533 ORAI2Q96SN7 254 aa13.05□□□□□ -0.32
COPB1-210ENST00000533533 SOS2Q07890 1332 aaPredicted RBP13.05□□□□□ -0.32
COPB1-210ENST00000533533 RPGRIP1LQ68CZ1 1315 aa13.05□□□□□ -0.32
COPB1-210ENST00000533533 RGS12O14924 1447 aa13.05□□□□□ -0.32
COPB1-210ENST00000533533 PRAG1Q86YV5 1406 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms