RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 NPHP4O75161 1426 aaPredicted RBP17.07■□□□□ 0.32
UBASH3B-208ENST00000533451 SETD5Q9C0A6 1442 aa17.07■□□□□ 0.32
UBASH3B-208ENST00000533451 KDM5AP29375 1690 aaKnown RBP17.07■□□□□ 0.32
UBASH3B-208ENST00000533451 SCAF11Q99590 1463 aaKnown RBP17.06■□□□□ 0.32
UBASH3B-208ENST00000533451 TXNDC2Q86VQ3 553 aa17.06■□□□□ 0.32
UBASH3B-208ENST00000533451 TMEM2Q9UHN6 1383 aa17.04■□□□□ 0.32
UBASH3B-208ENST00000533451 BCANQ96GW7 911 aa17.04■□□□□ 0.32
UBASH3B-208ENST00000533451 SLIT1O75093 1534 aa17.04■□□□□ 0.32
UBASH3B-208ENST00000533451 ZNF335Q9H4Z2 1342 aaPredicted RBP17.03■□□□□ 0.32
UBASH3B-208ENST00000533451 PPP1R15AO75807 674 aaPredicted RBP17.03■□□□□ 0.32
UBASH3B-208ENST00000533451 TMEM131LA2VDJ0 1609 aa17.03■□□□□ 0.32
UBASH3B-208ENST00000533451 RAB3GAP2Q9H2M9 1393 aa17.02■□□□□ 0.32
UBASH3B-208ENST00000533451 ARHGAP23Q9P227 1491 aa17.02■□□□□ 0.32
UBASH3B-208ENST00000533451 LTKP29376 864 aa17.01■□□□□ 0.31
UBASH3B-208ENST00000533451 CERKQ8TCT0 537 aa17.01■□□□□ 0.31
UBASH3B-208ENST00000533451 TRPM2O94759 1503 aa17.01■□□□□ 0.31
UBASH3B-208ENST00000533451 MED14O60244 1454 aa17■□□□□ 0.31
UBASH3B-208ENST00000533451 CLTCL1P53675 1640 aa17■□□□□ 0.31
UBASH3B-208ENST00000533451 ZNF326Q5BKZ1 582 aaKnown RBP17■□□□□ 0.31
UBASH3B-208ENST00000533451 KIF1BO60333 1816 aa17■□□□□ 0.31
UBASH3B-208ENST00000533451 RIMS2Q9UQ26 1411 aa16.99■□□□□ 0.31
UBASH3B-208ENST00000533451 NUTM2DQ5VT03 806 aaPredicted RBP16.99■□□□□ 0.31
UBASH3B-208ENST00000533451 MPHOSPH9Q99550 1183 aa16.98■□□□□ 0.31
UBASH3B-208ENST00000533451 HDGFP51858 240 aaKnown RBP16.97■□□□□ 0.31
UBASH3B-208ENST00000533451 ACIN1Q9UKV3 1341 aaKnown RBP16.96■□□□□ 0.31
UBASH3B-208ENST00000533451 LTBP4Q8N2S1 1624 aa16.96■□□□□ 0.31
UBASH3B-208ENST00000533451 ILDR1Q86SU0 546 aaPredicted RBP16.94■□□□□ 0.3
UBASH3B-208ENST00000533451 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.94■□□□□ 0.3
UBASH3B-208ENST00000533451 ZFYVE9O95405 1425 aa16.94■□□□□ 0.3
UBASH3B-208ENST00000533451 SLC26A8Q96RN1 970 aa16.93■□□□□ 0.3
UBASH3B-208ENST00000533451 FBXO41Q8TF61 875 aa16.92■□□□□ 0.3
UBASH3B-208ENST00000533451 CCDC144AA2RUR9 1427 aa16.92■□□□□ 0.3
UBASH3B-208ENST00000533451 CPS1P31327 1500 aa16.91■□□□□ 0.3
UBASH3B-208ENST00000533451 PLEKHG1Q9ULL1 1385 aa16.9■□□□□ 0.3
UBASH3B-208ENST00000533451 STRCP1A6NGW2 1772 aa16.89■□□□□ 0.29
UBASH3B-208ENST00000533451 NEXMIFQ5QGS0 1516 aa16.86■□□□□ 0.29
UBASH3B-208ENST00000533451 RGL3Q3MIN7 710 aa16.85■□□□□ 0.29
UBASH3B-208ENST00000533451 IQSEC2Q5JU85 1478 aa16.85■□□□□ 0.29
UBASH3B-208ENST00000533451 UBAP1LF5GYI3 381 aa16.84■□□□□ 0.29
UBASH3B-208ENST00000533451 DIP2AQ14689 1571 aa16.83■□□□□ 0.28
UBASH3B-208ENST00000533451 PPLO60437 1756 aa16.82■□□□□ 0.28
UBASH3B-208ENST00000533451 HRCP23327 699 aa16.82■□□□□ 0.28
UBASH3B-208ENST00000533451 LRRC7Q96NW7 1537 aa16.81■□□□□ 0.28
UBASH3B-208ENST00000533451 TRIM26Q12899 539 aaPredicted RBP16.81■□□□□ 0.28
UBASH3B-208ENST00000533451 KCNA6P17658 529 aa16.8■□□□□ 0.28
UBASH3B-208ENST00000533451 PROSER2Q86WR7 435 aaPredicted RBP16.8■□□□□ 0.28
UBASH3B-208ENST00000533451 CHD2O14647 1828 aaKnown RBP16.8■□□□□ 0.28
UBASH3B-208ENST00000533451 ADAMTS13Q76LX8 1427 aa16.79■□□□□ 0.28
UBASH3B-208ENST00000533451 RPGRIP1LQ68CZ1 1315 aa16.79■□□□□ 0.28
UBASH3B-208ENST00000533451 VGFO15240 615 aaPredicted RBP16.79■□□□□ 0.28
UBASH3B-208ENST00000533451 TBX22Q9Y458 520 aa16.79■□□□□ 0.28
UBASH3B-208ENST00000533451 NRXN3Q9Y4C0 1643 aa16.78■□□□□ 0.28
UBASH3B-208ENST00000533451 NWD1Q149M9 1564 aa16.78■□□□□ 0.28
UBASH3B-208ENST00000533451 SETBP1Q9Y6X0 1596 aa16.78■□□□□ 0.28
UBASH3B-208ENST00000533451 CAPN15O75808 1086 aa16.78■□□□□ 0.28
UBASH3B-208ENST00000533451 RBM33Q96EV2 1170 aaKnown RBP16.78■□□□□ 0.28
UBASH3B-208ENST00000533451 SPINK5Q9NQ38 1064 aaPredicted RBP16.78■□□□□ 0.28
UBASH3B-208ENST00000533451 PIP4K2BP78356 416 aa16.77■□□□□ 0.28
UBASH3B-208ENST00000533451 C14orf37Q86TY3 774 aa16.77■□□□□ 0.28
UBASH3B-208ENST00000533451 NKTRP30414 1462 aaKnown RBP16.77■□□□□ 0.28
UBASH3B-208ENST00000533451 SPATA31E1Q6ZUB1 1445 aa16.77■□□□□ 0.27
UBASH3B-208ENST00000533451 XIRP1Q702N8 1843 aaKnown RBP16.77■□□□□ 0.27
UBASH3B-208ENST00000533451 TMEM94Q12767 1356 aa16.77■□□□□ 0.27
UBASH3B-208ENST00000533451 TOM1O60784 492 aa16.76■□□□□ 0.27
UBASH3B-208ENST00000533451 IFT172Q9UG01 1749 aa16.76■□□□□ 0.27
UBASH3B-208ENST00000533451 ANKRD30BQ9BXX2 1392 aa16.76■□□□□ 0.27
UBASH3B-208ENST00000533451 PIK3R4Q99570 1358 aa16.73■□□□□ 0.27
UBASH3B-208ENST00000533451 FOXD4L1Q9NU39 408 aa16.72■□□□□ 0.27
UBASH3B-208ENST00000533451 AMOTL2Q9Y2J4 779 aa16.72■□□□□ 0.27
UBASH3B-208ENST00000533451 METP08581 1390 aa16.72■□□□□ 0.27
UBASH3B-208ENST00000533451 ADGRF5Q8IZF2 1346 aa16.71■□□□□ 0.27
UBASH3B-208ENST00000533451 PTPRUQ92729 1446 aa16.7■□□□□ 0.26
UBASH3B-208ENST00000533451 ALKQ9UM73 1620 aa16.7■□□□□ 0.26
UBASH3B-208ENST00000533451 MSH6P52701 1360 aa16.7■□□□□ 0.26
UBASH3B-208ENST00000533451 MYCNP04198 464 aaPredicted RBP16.7■□□□□ 0.26
UBASH3B-208ENST00000533451 XRN1Q8IZH2 1706 aaKnown RBP16.7■□□□□ 0.26
UBASH3B-208ENST00000533451 KDM2AQ9Y2K7 1162 aa16.69■□□□□ 0.26
UBASH3B-208ENST00000533451 SETD1AO15047 1707 aaKnown RBP16.68■□□□□ 0.26
UBASH3B-208ENST00000533451 SAMD1Q6SPF0 538 aaPredicted RBP16.68■□□□□ 0.26
UBASH3B-208ENST00000533451 DCAF11Q8TEB1 546 aa16.66■□□□□ 0.26
UBASH3B-208ENST00000533451 MYOM2P54296 1465 aa16.66■□□□□ 0.26
UBASH3B-208ENST00000533451 PIK3C2GO75747 1445 aa16.65■□□□□ 0.26
UBASH3B-208ENST00000533451 STK26Q9P289 416 aa16.65■□□□□ 0.26
UBASH3B-208ENST00000533451 LAMC1P11047 1609 aa16.63■□□□□ 0.25
UBASH3B-208ENST00000533451 ATF3P18847 181 aa16.62■□□□□ 0.25
UBASH3B-208ENST00000533451 NEUROD1Q13562 356 aa16.62■□□□□ 0.25
UBASH3B-208ENST00000533451 TMEM132EQ6IEE7 984 aa16.62■□□□□ 0.25
UBASH3B-208ENST00000533451 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.62■□□□□ 0.25
UBASH3B-208ENST00000533451 DHX57Q6P158 1386 aaKnown RBP16.61■□□□□ 0.25
UBASH3B-208ENST00000533451 HSPA1LP34931 641 aa16.6■□□□□ 0.25
UBASH3B-208ENST00000533451 PCGF6Q9BYE7 350 aa16.6■□□□□ 0.25
UBASH3B-208ENST00000533451 NCOA3Q9Y6Q9 1424 aa16.6■□□□□ 0.25
UBASH3B-208ENST00000533451 NALCNQ8IZF0 1738 aa16.59■□□□□ 0.25
UBASH3B-208ENST00000533451 CFAP70Q5T0N1 1121 aa16.59■□□□□ 0.25
UBASH3B-208ENST00000533451 C19orf44Q9H6X5 657 aa16.59■□□□□ 0.25
UBASH3B-208ENST00000533451 ROBO2Q9HCK4 1378 aa16.59■□□□□ 0.25
UBASH3B-208ENST00000533451 PTCH1Q13635 1447 aa16.59■□□□□ 0.25
UBASH3B-208ENST00000533451 NRXN1Q9ULB1 1477 aa16.59■□□□□ 0.25
UBASH3B-208ENST00000533451 ASXL1Q8IXJ9 1541 aa16.59■□□□□ 0.25
UBASH3B-208ENST00000533451 ROBO1Q9Y6N7 1651 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms