RNA–Protein interactions for RNA: ENST00000533432.5

CSRP1-219, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSRP1, Length 1,149 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-219ENST00000533432 XIRP1Q702N8 1843 aaKnown RBP18.34■□□□□ 0.53
CSRP1-219ENST00000533432 KCNA6P17658 529 aa18.33■□□□□ 0.52
CSRP1-219ENST00000533432 E9PCH4 1651 aa18.33■□□□□ 0.52
CSRP1-219ENST00000533432 DIP2AQ14689 1571 aa18.31■□□□□ 0.52
CSRP1-219ENST00000533432 RIMS2Q9UQ26 1411 aa18.31■□□□□ 0.52
CSRP1-219ENST00000533432 TMEM94Q12767 1356 aa18.3■□□□□ 0.52
CSRP1-219ENST00000533432 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.3■□□□□ 0.52
CSRP1-219ENST00000533432 FAM135BQ49AJ0 1406 aa18.3■□□□□ 0.52
CSRP1-219ENST00000533432 PPP1R15AO75807 674 aaPredicted RBP18.28■□□□□ 0.52
CSRP1-219ENST00000533432 NUP155O75694 1391 aa18.28■□□□□ 0.52
CSRP1-219ENST00000533432 SLC26A8Q96RN1 970 aa18.27■□□□□ 0.52
CSRP1-219ENST00000533432 MYO5BQ9ULV0 1848 aa18.27■□□□□ 0.52
CSRP1-219ENST00000533432 NCOA3Q9Y6Q9 1424 aa18.25■□□□□ 0.51
CSRP1-219ENST00000533432 MSH6P52701 1360 aa18.25■□□□□ 0.51
CSRP1-219ENST00000533432 PIK3R4Q99570 1358 aa18.25■□□□□ 0.51
CSRP1-219ENST00000533432 RRBP1Q9P2E9 1410 aaKnown RBP18.24■□□□□ 0.51
CSRP1-219ENST00000533432 CHD2O14647 1828 aaKnown RBP18.24■□□□□ 0.51
CSRP1-219ENST00000533432 PROSER2Q86WR7 435 aaPredicted RBP18.24■□□□□ 0.51
CSRP1-219ENST00000533432 BCANQ96GW7 911 aa18.24■□□□□ 0.51
CSRP1-219ENST00000533432 PHF23Q9BUL5 403 aaPredicted RBP18.22■□□□□ 0.51
CSRP1-219ENST00000533432 TBX22Q9Y458 520 aa18.22■□□□□ 0.51
CSRP1-219ENST00000533432 SPHKAPQ2M3C7 1700 aa18.22■□□□□ 0.51
CSRP1-219ENST00000533432 ROBO1Q9Y6N7 1651 aa18.22■□□□□ 0.51
CSRP1-219ENST00000533432 TRPM2O94759 1503 aa18.2■□□□□ 0.5
CSRP1-219ENST00000533432 ADAMTS13Q76LX8 1427 aa18.2■□□□□ 0.5
CSRP1-219ENST00000533432 CHGAP10645 457 aaKnown RBP18.18■□□□□ 0.5
CSRP1-219ENST00000533432 ITGAEP38570 1179 aa18.18■□□□□ 0.5
CSRP1-219ENST00000533432 SETBP1Q9Y6X0 1596 aa18.17■□□□□ 0.5
CSRP1-219ENST00000533432 NAIPQ13075 1403 aa18.15■□□□□ 0.5
CSRP1-219ENST00000533432 HFM1A2PYH4 1435 aa18.13■□□□□ 0.49
CSRP1-219ENST00000533432 DCCP43146 1447 aa18.13■□□□□ 0.49
CSRP1-219ENST00000533432 SLAIN2Q9P270 581 aa18.12■□□□□ 0.49
CSRP1-219ENST00000533432 SENP3Q9H4L4 574 aaPredicted RBP18.11■□□□□ 0.49
CSRP1-219ENST00000533432 NRXN3Q9Y4C0 1643 aa18.11■□□□□ 0.49
CSRP1-219ENST00000533432 XRN1Q8IZH2 1706 aaKnown RBP18.11■□□□□ 0.49
CSRP1-219ENST00000533432 CADPS2Q86UW7 1296 aa18.1■□□□□ 0.49
CSRP1-219ENST00000533432 PHLPP1O60346 1717 aa18.09■□□□□ 0.49
CSRP1-219ENST00000533432 CLTCL1P53675 1640 aa18.09■□□□□ 0.49
CSRP1-219ENST00000533432 PPARGC1BQ86YN6 1023 aaKnown RBP18.09■□□□□ 0.49
CSRP1-219ENST00000533432 RBM33Q96EV2 1170 aaKnown RBP18.09■□□□□ 0.49
CSRP1-219ENST00000533432 C14orf37Q86TY3 774 aa18.08■□□□□ 0.48
CSRP1-219ENST00000533432 C19orf44Q9H6X5 657 aa18.08■□□□□ 0.48
CSRP1-219ENST00000533432 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.08■□□□□ 0.48
CSRP1-219ENST00000533432 AHDC1Q5TGY3 1603 aaPredicted RBP18.08■□□□□ 0.48
CSRP1-219ENST00000533432 NEXMIFQ5QGS0 1516 aa18.08■□□□□ 0.48
CSRP1-219ENST00000533432 JCADQ9P266 1359 aa18.07■□□□□ 0.48
CSRP1-219ENST00000533432 COL16A1Q07092 1604 aaPredicted RBP18.07■□□□□ 0.48
CSRP1-219ENST00000533432 ATF3P18847 181 aa18.06■□□□□ 0.48
CSRP1-219ENST00000533432 ZNF326Q5BKZ1 582 aaKnown RBP18.06■□□□□ 0.48
CSRP1-219ENST00000533432 NUTM2DQ5VT03 806 aaPredicted RBP18.06■□□□□ 0.48
CSRP1-219ENST00000533432 KIF1BO60333 1816 aa18.06■□□□□ 0.48
CSRP1-219ENST00000533432 PTPRUQ92729 1446 aa18.06■□□□□ 0.48
CSRP1-219ENST00000533432 AMOTL2Q9Y2J4 779 aa18.05■□□□□ 0.48
CSRP1-219ENST00000533432 PRAG1Q86YV5 1406 aa18.01■□□□□ 0.47
CSRP1-219ENST00000533432 SPATA31A6Q5VVP1 1343 aa18■□□□□ 0.47
CSRP1-219ENST00000533432 SHPRHQ149N8 1683 aa18■□□□□ 0.47
CSRP1-219ENST00000533432 PTCH1Q13635 1447 aa18■□□□□ 0.47
CSRP1-219ENST00000533432 ADGRL3Q9HAR2 1447 aa18■□□□□ 0.47
CSRP1-219ENST00000533432 RGS17Q9UGC6 210 aaPredicted RBP18■□□□□ 0.47
CSRP1-219ENST00000533432 RPGRIP1LQ68CZ1 1315 aa17.99■□□□□ 0.47
CSRP1-219ENST00000533432 METP08581 1390 aa17.99■□□□□ 0.47
CSRP1-219ENST00000533432 VGFO15240 615 aaPredicted RBP17.98■□□□□ 0.47
CSRP1-219ENST00000533432 ASXL1Q8IXJ9 1541 aa17.98■□□□□ 0.47
CSRP1-219ENST00000533432 ACIN1Q9UKV3 1341 aaKnown RBP17.98■□□□□ 0.47
CSRP1-219ENST00000533432 TRIM52Q96A61 297 aa17.97■□□□□ 0.47
CSRP1-219ENST00000533432 SLC4A1APQ9BWU0 796 aaKnown RBP17.97■□□□□ 0.47
CSRP1-219ENST00000533432 MST1RQ04912 1400 aa17.97■□□□□ 0.47
CSRP1-219ENST00000533432 SETD1AO15047 1707 aaKnown RBP17.95■□□□□ 0.46
CSRP1-219ENST00000533432 BRINP3Q76B58 766 aa17.95■□□□□ 0.46
CSRP1-219ENST00000533432 NALCNQ8IZF0 1738 aa17.95■□□□□ 0.46
CSRP1-219ENST00000533432 NHSL1Q5SYE7 1610 aa17.94■□□□□ 0.46
CSRP1-219ENST00000533432 PPLO60437 1756 aa17.94■□□□□ 0.46
CSRP1-219ENST00000533432 SETD5Q9C0A6 1442 aa17.93■□□□□ 0.46
CSRP1-219ENST00000533432 LRP6O75581 1613 aa17.91■□□□□ 0.46
CSRP1-219ENST00000533432 CCDC144AA2RUR9 1427 aa17.91■□□□□ 0.46
CSRP1-219ENST00000533432 POTEAQ6S8J7 498 aa17.89■□□□□ 0.45
CSRP1-219ENST00000533432 LAMC1P11047 1609 aa17.89■□□□□ 0.45
CSRP1-219ENST00000533432 ZNF772Q68DY9 489 aaPredicted RBP17.88■□□□□ 0.45
CSRP1-219ENST00000533432 MEX3CQ5U5Q3 659 aaKnown RBP17.87■□□□□ 0.45
CSRP1-219ENST00000533432 ANKRD30BQ9BXX2 1392 aa17.87■□□□□ 0.45
CSRP1-219ENST00000533432 LRRC59Q96AG4 307 aaKnown RBP17.86■□□□□ 0.45
CSRP1-219ENST00000533432 ROBO2Q9HCK4 1378 aa17.86■□□□□ 0.45
CSRP1-219ENST00000533432 C1orf167Q5SNV9 1468 aa17.86■□□□□ 0.45
CSRP1-219ENST00000533432 CDC42BPGQ6DT37 1551 aa17.86■□□□□ 0.45
CSRP1-219ENST00000533432 SPATA31E1Q6ZUB1 1445 aa17.85■□□□□ 0.45
CSRP1-219ENST00000533432 IFT172Q9UG01 1749 aa17.84■□□□□ 0.45
CSRP1-219ENST00000533432 TECPR2O15040 1411 aa17.84■□□□□ 0.45
CSRP1-219ENST00000533432 MPHOSPH9Q99550 1183 aa17.81■□□□□ 0.44
CSRP1-219ENST00000533432 CDK12Q9NYV4 1490 aaPredicted RBP17.81■□□□□ 0.44
CSRP1-219ENST00000533432 KNDC1Q76NI1 1749 aa17.81■□□□□ 0.44
CSRP1-219ENST00000533432 PIK3C2GO75747 1445 aa17.81■□□□□ 0.44
CSRP1-219ENST00000533432 PNPLA6Q8IY17 1366 aa17.8■□□□□ 0.44
CSRP1-219ENST00000533432 LRPPRCP42704 1394 aaKnown RBP17.78■□□□□ 0.44
CSRP1-219ENST00000533432 SOS2Q07890 1332 aaPredicted RBP17.77■□□□□ 0.44
CSRP1-219ENST00000533432 FOXD1Q16676 465 aa17.77■□□□□ 0.44
CSRP1-219ENST00000533432 MYOM2P54296 1465 aa17.76■□□□□ 0.43
CSRP1-219ENST00000533432 ABCC11Q96J66 1382 aa17.76■□□□□ 0.43
CSRP1-219ENST00000533432 ADGRF5Q8IZF2 1346 aa17.75■□□□□ 0.43
CSRP1-219ENST00000533432 COL22A1Q8NFW1 1626 aaPredicted RBP17.75■□□□□ 0.43
CSRP1-219ENST00000533432 NRXN1Q9ULB1 1477 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms