RNA–Protein interactions for RNA: ENST00000533348.5

GSDMD-213, Transcript of gasdermin D, humanhuman

TSL 5

Gene GSDMD, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-213ENST00000533348 SOCS7O14512 581 aa23.09■■□□□ 1.29
GSDMD-213ENST00000533348 PPARGC1BQ86YN6 1023 aaKnown RBP23.09■■□□□ 1.29
GSDMD-213ENST00000533348 ITGAEP38570 1179 aa23.08■■□□□ 1.29
GSDMD-213ENST00000533348 NWD1Q149M9 1564 aa23.08■■□□□ 1.29
GSDMD-213ENST00000533348 MED1Q15648 1581 aaPredicted RBP23.08■■□□□ 1.29
GSDMD-213ENST00000533348 CHD2O14647 1828 aaKnown RBP23.08■■□□□ 1.28
GSDMD-213ENST00000533348 NUP155O75694 1391 aa23.07■■□□□ 1.28
GSDMD-213ENST00000533348 RIMS2Q9UQ26 1411 aa23.07■■□□□ 1.28
GSDMD-213ENST00000533348 PLEKHG1Q9ULL1 1385 aa23.06■■□□□ 1.28
GSDMD-213ENST00000533348 NKTRP30414 1462 aaKnown RBP23.05■■□□□ 1.28
GSDMD-213ENST00000533348 TMEM94Q12767 1356 aa23.04■■□□□ 1.28
GSDMD-213ENST00000533348 BCANQ96GW7 911 aa23.04■■□□□ 1.28
GSDMD-213ENST00000533348 PROSER2Q86WR7 435 aaPredicted RBP23.03■■□□□ 1.28
GSDMD-213ENST00000533348 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.03■■□□□ 1.28
GSDMD-213ENST00000533348 RRBP1Q9P2E9 1410 aaKnown RBP23.02■■□□□ 1.28
GSDMD-213ENST00000533348 PPP1R15AO75807 674 aaPredicted RBP23.02■■□□□ 1.28
GSDMD-213ENST00000533348 SPHKAPQ2M3C7 1700 aa23■■□□□ 1.27
GSDMD-213ENST00000533348 CHGAP10645 457 aaKnown RBP23■■□□□ 1.27
GSDMD-213ENST00000533348 FAM135BQ49AJ0 1406 aa22.99■■□□□ 1.27
GSDMD-213ENST00000533348 TBX22Q9Y458 520 aa22.99■■□□□ 1.27
GSDMD-213ENST00000533348 DIP2AQ14689 1571 aa22.97■■□□□ 1.27
GSDMD-213ENST00000533348 SENP3Q9H4L4 574 aaPredicted RBP22.94■■□□□ 1.26
GSDMD-213ENST00000533348 ROBO1Q9Y6N7 1651 aa22.93■■□□□ 1.26
GSDMD-213ENST00000533348 ADAMTS13Q76LX8 1427 aa22.93■■□□□ 1.26
GSDMD-213ENST00000533348 MSH6P52701 1360 aa22.93■■□□□ 1.26
GSDMD-213ENST00000533348 RBM33Q96EV2 1170 aaKnown RBP22.93■■□□□ 1.26
GSDMD-213ENST00000533348 PIK3R4Q99570 1358 aa22.92■■□□□ 1.26
GSDMD-213ENST00000533348 NCOA3Q9Y6Q9 1424 aa22.91■■□□□ 1.26
GSDMD-213ENST00000533348 NAIPQ13075 1403 aa22.91■■□□□ 1.26
GSDMD-213ENST00000533348 NUTM2DQ5VT03 806 aaPredicted RBP22.9■■□□□ 1.26
GSDMD-213ENST00000533348 TRPM2O94759 1503 aa22.88■■□□□ 1.25
GSDMD-213ENST00000533348 PHF23Q9BUL5 403 aaPredicted RBP22.88■■□□□ 1.25
GSDMD-213ENST00000533348 KIF1BO60333 1816 aa22.87■■□□□ 1.25
GSDMD-213ENST00000533348 SLAIN2Q9P270 581 aa22.86■■□□□ 1.25
GSDMD-213ENST00000533348 NRXN3Q9Y4C0 1643 aa22.85■■□□□ 1.25
GSDMD-213ENST00000533348 SETBP1Q9Y6X0 1596 aa22.84■■□□□ 1.25
GSDMD-213ENST00000533348 CLTCL1P53675 1640 aa22.84■■□□□ 1.25
GSDMD-213ENST00000533348 HFM1A2PYH4 1435 aa22.83■■□□□ 1.25
GSDMD-213ENST00000533348 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.83■■□□□ 1.25
GSDMD-213ENST00000533348 ZNF326Q5BKZ1 582 aaKnown RBP22.81■■□□□ 1.24
GSDMD-213ENST00000533348 PHLPP1O60346 1717 aa22.81■■□□□ 1.24
GSDMD-213ENST00000533348 AMOTL2Q9Y2J4 779 aa22.8■■□□□ 1.24
GSDMD-213ENST00000533348 PTPRUQ92729 1446 aa22.8■■□□□ 1.24
GSDMD-213ENST00000533348 XRN1Q8IZH2 1706 aaKnown RBP22.79■■□□□ 1.24
GSDMD-213ENST00000533348 C19orf44Q9H6X5 657 aa22.79■■□□□ 1.24
GSDMD-213ENST00000533348 NEXMIFQ5QGS0 1516 aa22.78■■□□□ 1.24
GSDMD-213ENST00000533348 C14orf37Q86TY3 774 aa22.78■■□□□ 1.24
GSDMD-213ENST00000533348 CADPS2Q86UW7 1296 aa22.77■■□□□ 1.24
GSDMD-213ENST00000533348 TRIM52Q96A61 297 aa22.76■■□□□ 1.23
GSDMD-213ENST00000533348 ATF3P18847 181 aa22.74■■□□□ 1.23
GSDMD-213ENST00000533348 COL16A1Q07092 1604 aaPredicted RBP22.73■■□□□ 1.23
GSDMD-213ENST00000533348 RGS17Q9UGC6 210 aaPredicted RBP22.73■■□□□ 1.23
GSDMD-213ENST00000533348 DCCP43146 1447 aa22.72■■□□□ 1.23
GSDMD-213ENST00000533348 SLC4A1APQ9BWU0 796 aaKnown RBP22.71■■□□□ 1.23
GSDMD-213ENST00000533348 METP08581 1390 aa22.71■■□□□ 1.23
GSDMD-213ENST00000533348 JCADQ9P266 1359 aa22.71■■□□□ 1.23
GSDMD-213ENST00000533348 AHDC1Q5TGY3 1603 aaPredicted RBP22.7■■□□□ 1.22
GSDMD-213ENST00000533348 VGFO15240 615 aaPredicted RBP22.68■■□□□ 1.22
GSDMD-213ENST00000533348 PPLO60437 1756 aa22.68■■□□□ 1.22
GSDMD-213ENST00000533348 SETD1AO15047 1707 aaKnown RBP22.68■■□□□ 1.22
GSDMD-213ENST00000533348 RPGRIP1LQ68CZ1 1315 aa22.67■■□□□ 1.22
GSDMD-213ENST00000533348 SHPRHQ149N8 1683 aa22.64■■□□□ 1.21
GSDMD-213ENST00000533348 NALCNQ8IZF0 1738 aa22.62■■□□□ 1.21
GSDMD-213ENST00000533348 BRINP3Q76B58 766 aa22.62■■□□□ 1.21
GSDMD-213ENST00000533348 ADGRL3Q9HAR2 1447 aa22.62■■□□□ 1.21
GSDMD-213ENST00000533348 SPATA31A6Q5VVP1 1343 aa22.61■■□□□ 1.21
GSDMD-213ENST00000533348 MST1RQ04912 1400 aa22.61■■□□□ 1.21
GSDMD-213ENST00000533348 NHSL1Q5SYE7 1610 aa22.6■■□□□ 1.21
GSDMD-213ENST00000533348 ASXL1Q8IXJ9 1541 aa22.59■■□□□ 1.21
GSDMD-213ENST00000533348 POTEAQ6S8J7 498 aa22.59■■□□□ 1.21
GSDMD-213ENST00000533348 PTCH1Q13635 1447 aa22.58■■□□□ 1.21
GSDMD-213ENST00000533348 PRAG1Q86YV5 1406 aa22.58■■□□□ 1.21
GSDMD-213ENST00000533348 ACIN1Q9UKV3 1341 aaKnown RBP22.57■■□□□ 1.2
GSDMD-213ENST00000533348 FOXD1Q16676 465 aa22.56■■□□□ 1.2
GSDMD-213ENST00000533348 MPHOSPH9Q99550 1183 aa22.56■■□□□ 1.2
GSDMD-213ENST00000533348 CCDC144AA2RUR9 1427 aa22.56■■□□□ 1.2
GSDMD-213ENST00000533348 IFT172Q9UG01 1749 aa22.55■■□□□ 1.2
GSDMD-213ENST00000533348 LRP6O75581 1613 aa22.54■■□□□ 1.2
GSDMD-213ENST00000533348 SETD5Q9C0A6 1442 aa22.53■■□□□ 1.2
GSDMD-213ENST00000533348 ROBO2Q9HCK4 1378 aa22.52■■□□□ 1.2
GSDMD-213ENST00000533348 SPATA31E1Q6ZUB1 1445 aa22.52■■□□□ 1.2
GSDMD-213ENST00000533348 LAMC1P11047 1609 aa22.49■■□□□ 1.19
GSDMD-213ENST00000533348 C1orf167Q5SNV9 1468 aa22.49■■□□□ 1.19
GSDMD-213ENST00000533348 MEX3CQ5U5Q3 659 aaKnown RBP22.49■■□□□ 1.19
GSDMD-213ENST00000533348 LRRC59Q96AG4 307 aaKnown RBP22.49■■□□□ 1.19
GSDMD-213ENST00000533348 ANKRD30BQ9BXX2 1392 aa22.49■■□□□ 1.19
GSDMD-213ENST00000533348 RGL3Q3MIN7 710 aa22.47■■□□□ 1.19
GSDMD-213ENST00000533348 ADGRF5Q8IZF2 1346 aa22.47■■□□□ 1.19
GSDMD-213ENST00000533348 ZNF772Q68DY9 489 aaPredicted RBP22.46■■□□□ 1.19
GSDMD-213ENST00000533348 KNDC1Q76NI1 1749 aa22.43■■□□□ 1.18
GSDMD-213ENST00000533348 TECPR2O15040 1411 aa22.42■■□□□ 1.18
GSDMD-213ENST00000533348 NUTM2BA6NNL0 878 aaPredicted RBP22.42■■□□□ 1.18
GSDMD-213ENST00000533348 NUTM2EB1AL46 878 aaPredicted RBP22.42■■□□□ 1.18
GSDMD-213ENST00000533348 NUTM2AQ8IVF1 878 aaPredicted RBP22.42■■□□□ 1.18
GSDMD-213ENST00000533348 DDX17Q92841 729 aaKnown RBP22.42■■□□□ 1.18
GSDMD-213ENST00000533348 CDC42BPGQ6DT37 1551 aa22.42■■□□□ 1.18
GSDMD-213ENST00000533348 PIK3C2GO75747 1445 aa22.4■■□□□ 1.18
GSDMD-213ENST00000533348 PNPLA6Q8IY17 1366 aa22.4■■□□□ 1.18
GSDMD-213ENST00000533348 ORAI2Q96SN7 254 aa22.4■■□□□ 1.18
GSDMD-213ENST00000533348 LRPPRCP42704 1394 aaKnown RBP22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms