RNA–Protein interactions for RNA: ENST00000533188.1

CSRP1-217, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 3

Gene CSRP1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-217ENST00000533188 KIF1BO60333 1816 aa21.63■■□□□ 1.05
CSRP1-217ENST00000533188 ILDR2Q71H61 639 aa21.62■■□□□ 1.05
CSRP1-217ENST00000533188 TOM1O60784 492 aa21.61■■□□□ 1.05
CSRP1-217ENST00000533188 FOXD1Q16676 465 aa21.61■■□□□ 1.05
CSRP1-217ENST00000533188 XIRP1Q702N8 1843 aaKnown RBP21.6■■□□□ 1.05
CSRP1-217ENST00000533188 MPHOSPH9Q99550 1183 aa21.6■■□□□ 1.05
CSRP1-217ENST00000533188 SLC52A1Q9NWF4 448 aa21.6■■□□□ 1.05
CSRP1-217ENST00000533188 PIP4K2BP78356 416 aa21.58■■□□□ 1.05
CSRP1-217ENST00000533188 HSPA1LP34931 641 aa21.57■■□□□ 1.04
CSRP1-217ENST00000533188 STAG3Q9UJ98 1225 aa21.57■■□□□ 1.04
CSRP1-217ENST00000533188 EID1Q9Y6B2 187 aa21.57■■□□□ 1.04
CSRP1-217ENST00000533188 TRIM26Q12899 539 aaPredicted RBP21.56■■□□□ 1.04
CSRP1-217ENST00000533188 ACIN1Q9UKV3 1341 aaKnown RBP21.55■■□□□ 1.04
CSRP1-217ENST00000533188 ZFYVE9O95405 1425 aa21.55■■□□□ 1.04
CSRP1-217ENST00000533188 SCAF1Q9H7N4 1312 aaKnown RBP21.54■■□□□ 1.04
CSRP1-217ENST00000533188 CHGAP10645 457 aaKnown RBP21.52■■□□□ 1.04
CSRP1-217ENST00000533188 HRCP23327 699 aa21.52■■□□□ 1.04
CSRP1-217ENST00000533188 RIMS2Q9UQ26 1411 aa21.51■■□□□ 1.03
CSRP1-217ENST00000533188 NEXMIFQ5QGS0 1516 aa21.5■■□□□ 1.03
CSRP1-217ENST00000533188 CCDC144AA2RUR9 1427 aa21.49■■□□□ 1.03
CSRP1-217ENST00000533188 PPLO60437 1756 aa21.48■■□□□ 1.03
CSRP1-217ENST00000533188 SLC26A8Q96RN1 970 aa21.48■■□□□ 1.03
CSRP1-217ENST00000533188 IFT172Q9UG01 1749 aa21.48■■□□□ 1.03
CSRP1-217ENST00000533188 KCNA6P17658 529 aa21.46■■□□□ 1.03
CSRP1-217ENST00000533188 NRXN3Q9Y4C0 1643 aa21.44■■□□□ 1.02
CSRP1-217ENST00000533188 NWD1Q149M9 1564 aa21.44■■□□□ 1.02
CSRP1-217ENST00000533188 MED1Q15648 1581 aaPredicted RBP21.43■■□□□ 1.02
CSRP1-217ENST00000533188 CHD2O14647 1828 aaKnown RBP21.42■■□□□ 1.02
CSRP1-217ENST00000533188 TMEM94Q12767 1356 aa21.42■■□□□ 1.02
CSRP1-217ENST00000533188 SPATA31E1Q6ZUB1 1445 aa21.42■■□□□ 1.02
CSRP1-217ENST00000533188 ANKRD30BQ9BXX2 1392 aa21.42■■□□□ 1.02
CSRP1-217ENST00000533188 PLEKHG1Q9ULL1 1385 aa21.42■■□□□ 1.02
CSRP1-217ENST00000533188 SOCS7O14512 581 aa21.41■■□□□ 1.02
CSRP1-217ENST00000533188 NUTM2DQ5VT03 806 aaPredicted RBP21.41■■□□□ 1.02
CSRP1-217ENST00000533188 SENP3Q9H4L4 574 aaPredicted RBP21.41■■□□□ 1.02
CSRP1-217ENST00000533188 ZNF326Q5BKZ1 582 aaKnown RBP21.4■■□□□ 1.02
CSRP1-217ENST00000533188 PPP1R15AO75807 674 aaPredicted RBP21.39■■□□□ 1.01
CSRP1-217ENST00000533188 RBM33Q96EV2 1170 aaKnown RBP21.38■■□□□ 1.01
CSRP1-217ENST00000533188 DIP2AQ14689 1571 aa21.38■■□□□ 1.01
CSRP1-217ENST00000533188 SETBP1Q9Y6X0 1596 aa21.38■■□□□ 1.01
CSRP1-217ENST00000533188 NKTRP30414 1462 aaKnown RBP21.38■■□□□ 1.01
CSRP1-217ENST00000533188 SETD1AO15047 1707 aaKnown RBP21.36■■□□□ 1.01
CSRP1-217ENST00000533188 PROSER2Q86WR7 435 aaPredicted RBP21.36■■□□□ 1.01
CSRP1-217ENST00000533188 ADAMTS13Q76LX8 1427 aa21.36■■□□□ 1.01
CSRP1-217ENST00000533188 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.35■■□□□ 1.01
CSRP1-217ENST00000533188 FAM135BQ49AJ0 1406 aa21.34■■□□□ 1.01
CSRP1-217ENST00000533188 DHX57Q6P158 1386 aaKnown RBP21.34■■□□□ 1.01
CSRP1-217ENST00000533188 HDGFP51858 240 aaKnown RBP21.33■■□□□ 1.01
CSRP1-217ENST00000533188 BCANQ96GW7 911 aa21.33■■□□□ 1.01
CSRP1-217ENST00000533188 TBX22Q9Y458 520 aa21.33■■□□□ 1.01
CSRP1-217ENST00000533188 PCGF6Q9BYE7 350 aa21.3■■□□□ 1
CSRP1-217ENST00000533188 ROBO1Q9Y6N7 1651 aa21.3■■□□□ 1
CSRP1-217ENST00000533188 RGL3Q3MIN7 710 aa21.29■■□□□ 1
CSRP1-217ENST00000533188 RPGRIP1LQ68CZ1 1315 aa21.28■■□□□ 1
CSRP1-217ENST00000533188 XRN1Q8IZH2 1706 aaKnown RBP21.27■■□□□ 1
CSRP1-217ENST00000533188 MYOM2P54296 1465 aa21.26■□□□□ 0.99
CSRP1-217ENST00000533188 PIK3R4Q99570 1358 aa21.25■□□□□ 0.99
CSRP1-217ENST00000533188 MSH6P52701 1360 aa21.24■□□□□ 0.99
CSRP1-217ENST00000533188 PTPRUQ92729 1446 aa21.24■□□□□ 0.99
CSRP1-217ENST00000533188 NCOA3Q9Y6Q9 1424 aa21.23■□□□□ 0.99
CSRP1-217ENST00000533188 NRXN1Q9ULB1 1477 aa21.23■□□□□ 0.99
CSRP1-217ENST00000533188 ADGRF5Q8IZF2 1346 aa21.23■□□□□ 0.99
CSRP1-217ENST00000533188 LAMC1P11047 1609 aa21.22■□□□□ 0.99
CSRP1-217ENST00000533188 PIK3C2GO75747 1445 aa21.22■□□□□ 0.99
CSRP1-217ENST00000533188 ASXL1Q8IXJ9 1541 aa21.22■□□□□ 0.99
CSRP1-217ENST00000533188 VGFO15240 615 aaPredicted RBP21.21■□□□□ 0.99
CSRP1-217ENST00000533188 SLAIN2Q9P270 581 aa21.21■□□□□ 0.99
CSRP1-217ENST00000533188 METP08581 1390 aa21.21■□□□□ 0.99
CSRP1-217ENST00000533188 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.21■□□□□ 0.99
CSRP1-217ENST00000533188 RGS17Q9UGC6 210 aaPredicted RBP21.18■□□□□ 0.98
CSRP1-217ENST00000533188 AMOTL2Q9Y2J4 779 aa21.18■□□□□ 0.98
CSRP1-217ENST00000533188 PHF23Q9BUL5 403 aaPredicted RBP21.17■□□□□ 0.98
CSRP1-217ENST00000533188 PHLPP1O60346 1717 aa21.16■□□□□ 0.98
CSRP1-217ENST00000533188 SIN3AQ96ST3 1273 aa21.15■□□□□ 0.98
CSRP1-217ENST00000533188 KNDC1Q76NI1 1749 aa21.15■□□□□ 0.98
CSRP1-217ENST00000533188 C19orf44Q9H6X5 657 aa21.13■□□□□ 0.97
CSRP1-217ENST00000533188 COL16A1Q07092 1604 aaPredicted RBP21.12■□□□□ 0.97
CSRP1-217ENST00000533188 DCAF11Q8TEB1 546 aa21.12■□□□□ 0.97
CSRP1-217ENST00000533188 NALCNQ8IZF0 1738 aa21.12■□□□□ 0.97
CSRP1-217ENST00000533188 CADPS2Q86UW7 1296 aa21.1■□□□□ 0.97
CSRP1-217ENST00000533188 KDM2AQ9Y2K7 1162 aa21.1■□□□□ 0.97
CSRP1-217ENST00000533188 NEUROD1Q13562 356 aa21.09■□□□□ 0.97
CSRP1-217ENST00000533188 C14orf37Q86TY3 774 aa21.09■□□□□ 0.97
CSRP1-217ENST00000533188 PRAG1Q86YV5 1406 aa21.09■□□□□ 0.97
CSRP1-217ENST00000533188 ADGRB1O14514 1584 aa21.09■□□□□ 0.97
CSRP1-217ENST00000533188 PTCH1Q13635 1447 aa21.08■□□□□ 0.97
CSRP1-217ENST00000533188 KIAA1210Q9ULL0 1709 aa21.08■□□□□ 0.97
CSRP1-217ENST00000533188 AHDC1Q5TGY3 1603 aaPredicted RBP21.07■□□□□ 0.96
CSRP1-217ENST00000533188 ATF3P18847 181 aa21.06■□□□□ 0.96
CSRP1-217ENST00000533188 JCADQ9P266 1359 aa21.06■□□□□ 0.96
CSRP1-217ENST00000533188 DCCP43146 1447 aa21.05■□□□□ 0.96
CSRP1-217ENST00000533188 CFAP70Q5T0N1 1121 aa21.05■□□□□ 0.96
CSRP1-217ENST00000533188 ROBO2Q9HCK4 1378 aa21.05■□□□□ 0.96
CSRP1-217ENST00000533188 TRPM1Q7Z4N2 1603 aa21.04■□□□□ 0.96
CSRP1-217ENST00000533188 TECPR2O15040 1411 aa21.04■□□□□ 0.96
CSRP1-217ENST00000533188 YTHDC2Q9H6S0 1430 aaKnown RBP21.04■□□□□ 0.96
CSRP1-217ENST00000533188 TMEM132EQ6IEE7 984 aa21.03■□□□□ 0.96
CSRP1-217ENST00000533188 POTEAQ6S8J7 498 aa21.03■□□□□ 0.96
CSRP1-217ENST00000533188 BRINP3Q76B58 766 aa21.03■□□□□ 0.96
CSRP1-217ENST00000533188 L3MBTL2Q969R5 705 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms