RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 PPP1R15AO75807 674 aaPredicted RBP45.46■■■■■ 4.87
SSSCA1-207ENST00000533115 SLC26A8Q96RN1 970 aa45.46■■■■■ 4.87
SSSCA1-207ENST00000533115 ABCF1Q8NE71 845 aaKnown RBP eCLIP45.45■■■■■ 4.87
SSSCA1-207ENST00000533115 BCANQ96GW7 911 aa45.44■■■■■ 4.86
SSSCA1-207ENST00000533115 PLEKHG1Q9ULL1 1385 aa45.44■■■■■ 4.86
SSSCA1-207ENST00000533115 SLC4A1APQ9BWU0 796 aaKnown RBP45.39■■■■■ 4.86
SSSCA1-207ENST00000533115 TRPM2O94759 1503 aa45.38■■■■■ 4.86
SSSCA1-207ENST00000533115 TOM1O60784 492 aa45.38■■■■■ 4.86
SSSCA1-207ENST00000533115 SENP3Q9H4L4 574 aaPredicted RBP45.36■■■■■ 4.85
SSSCA1-207ENST00000533115 KCNA6P17658 529 aa45.35■■■■■ 4.85
SSSCA1-207ENST00000533115 NUTM2DQ5VT03 806 aaPredicted RBP45.35■■■■■ 4.85
SSSCA1-207ENST00000533115 CLTCL1P53675 1640 aa45.33■■■■■ 4.85
SSSCA1-207ENST00000533115 PIP4K2BP78356 416 aa45.26■■■■■ 4.84
SSSCA1-207ENST00000533115 ZNF326Q5BKZ1 582 aaKnown RBP45.25■■■■■ 4.83
SSSCA1-207ENST00000533115 TBX22Q9Y458 520 aa45.25■■■■■ 4.83
SSSCA1-207ENST00000533115 SCAF1Q9H7N4 1312 aaKnown RBP45.25■■■■■ 4.83
SSSCA1-207ENST00000533115 NWD1Q149M9 1564 aa45.24■■■■■ 4.83
SSSCA1-207ENST00000533115 ALKQ9UM73 1620 aa45.23■■■■■ 4.83
SSSCA1-207ENST00000533115 XIRP1Q702N8 1843 aaKnown RBP45.22■■■■■ 4.83
SSSCA1-207ENST00000533115 ADAMTS13Q76LX8 1427 aa45.21■■■■■ 4.83
SSSCA1-207ENST00000533115 SETD5Q9C0A6 1442 aa45.21■■■■■ 4.83
SSSCA1-207ENST00000533115 KIF1BO60333 1816 aa45.19■■■■■ 4.83
SSSCA1-207ENST00000533115 NKTRP30414 1462 aaKnown RBP45.18■■■■■ 4.82
SSSCA1-207ENST00000533115 DIP2AQ14689 1571 aa45.18■■■■■ 4.82
SSSCA1-207ENST00000533115 TMEM94Q12767 1356 aa45.18■■■■■ 4.82
SSSCA1-207ENST00000533115 PROSER2Q86WR7 435 aaPredicted RBP45.17■■■■■ 4.82
SSSCA1-207ENST00000533115 ACIN1Q9UKV3 1341 aaKnown RBP45.17■■■■■ 4.82
SSSCA1-207ENST00000533115 CHD2O14647 1828 aaKnown RBP45.17■■■■■ 4.82
SSSCA1-207ENST00000533115 MPHOSPH9Q99550 1183 aa45.16■■■■■ 4.82
SSSCA1-207ENST00000533115 FOXD1Q16676 465 aa45.15■■■■■ 4.82
SSSCA1-207ENST00000533115 NEXMIFQ5QGS0 1516 aa45.11■■■■■ 4.81
SSSCA1-207ENST00000533115 PIK3R4Q99570 1358 aa45.08■■■■■ 4.81
SSSCA1-207ENST00000533115 RBM33Q96EV2 1170 aaKnown RBP45.07■■■■■ 4.81
SSSCA1-207ENST00000533115 SETBP1Q9Y6X0 1596 aa45.06■■■■■ 4.8
SSSCA1-207ENST00000533115 NRXN3Q9Y4C0 1643 aa45.04■■■■■ 4.8
SSSCA1-207ENST00000533115 HSPA1LP34931 641 aa45.04■■■■■ 4.8
SSSCA1-207ENST00000533115 RAB3GAP2Q9H2M9 1393 aa45.04■■■■■ 4.8
SSSCA1-207ENST00000533115 CCDC144AA2RUR9 1427 aa44.99■■■■■ 4.79
SSSCA1-207ENST00000533115 RPGRIP1LQ68CZ1 1315 aa44.98■■■■■ 4.79
SSSCA1-207ENST00000533115 PTPRUQ92729 1446 aa44.94■■■■■ 4.79
SSSCA1-207ENST00000533115 VGFO15240 615 aaPredicted RBP44.94■■■■■ 4.78
SSSCA1-207ENST00000533115 AMOTL2Q9Y2J4 779 aa44.94■■■■■ 4.78
SSSCA1-207ENST00000533115 MSH6P52701 1360 aa44.93■■■■■ 4.78
SSSCA1-207ENST00000533115 NCOA3Q9Y6Q9 1424 aa44.91■■■■■ 4.78
SSSCA1-207ENST00000533115 METP08581 1390 aa44.88■■■■■ 4.78
SSSCA1-207ENST00000533115 PPLO60437 1756 aa44.86■■■■■ 4.77
SSSCA1-207ENST00000533115 XRN1Q8IZH2 1706 aaKnown RBP44.83■■■■■ 4.77
SSSCA1-207ENST00000533115 FAM135BQ49AJ0 1406 aa44.83■■■■■ 4.77
SSSCA1-207ENST00000533115 SPATA31E1Q6ZUB1 1445 aa44.83■■■■■ 4.77
SSSCA1-207ENST00000533115 DISP3Q9P2K9 1392 aa44.82■■■■■ 4.76
SSSCA1-207ENST00000533115 HRCP23327 699 aa44.8■■■■■ 4.76
SSSCA1-207ENST00000533115 C14orf37Q86TY3 774 aa44.8■■■■■ 4.76
SSSCA1-207ENST00000533115 RGL3Q3MIN7 710 aa44.79■■■■■ 4.76
SSSCA1-207ENST00000533115 C19orf44Q9H6X5 657 aa44.74■■■■■ 4.75
SSSCA1-207ENST00000533115 SLAIN2Q9P270 581 aa44.74■■■■■ 4.75
SSSCA1-207ENST00000533115 SETD1AO15047 1707 aaKnown RBP44.72■■■■■ 4.75
SSSCA1-207ENST00000533115 ROBO1Q9Y6N7 1651 aa44.71■■■■■ 4.75
SSSCA1-207ENST00000533115 SIPA1L2Q9P2F8 1722 aaPredicted RBP44.7■■■■■ 4.75
SSSCA1-207ENST00000533115 ANKRD30BQ9BXX2 1392 aa44.69■■■■■ 4.75
SSSCA1-207ENST00000533115 IFT172Q9UG01 1749 aa44.67■■■■■ 4.74
SSSCA1-207ENST00000533115 ADGRF5Q8IZF2 1346 aa44.67■■■■■ 4.74
SSSCA1-207ENST00000533115 CADPS2Q86UW7 1296 aa44.66■■■■■ 4.74
SSSCA1-207ENST00000533115 ATF3P18847 181 aa44.65■■■■■ 4.74
SSSCA1-207ENST00000533115 DCCP43146 1447 aa44.58■■■■■ 4.73
SSSCA1-207ENST00000533115 PTCH1Q13635 1447 aa44.56■■■■■ 4.72
SSSCA1-207ENST00000533115 MED1Q15648 1581 aaPredicted RBP44.56■■■■■ 4.72
SSSCA1-207ENST00000533115 PRAG1Q86YV5 1406 aa44.53■■■■■ 4.72
SSSCA1-207ENST00000533115 ADGRL3Q9HAR2 1447 aa44.52■■■■■ 4.72
SSSCA1-207ENST00000533115 ROBO2Q9HCK4 1378 aa44.52■■■■■ 4.72
SSSCA1-207ENST00000533115 PIK3C2GO75747 1445 aa44.51■■■■■ 4.72
SSSCA1-207ENST00000533115 NALCNQ8IZF0 1738 aa44.46■■■■■ 4.71
SSSCA1-207ENST00000533115 PHLPP1O60346 1717 aa44.44■■■■■ 4.71
SSSCA1-207ENST00000533115 MYOM2P54296 1465 aa44.44■■■■■ 4.7
SSSCA1-207ENST00000533115 MST1RQ04912 1400 aa44.41■■■■■ 4.7
SSSCA1-207ENST00000533115 NRXN1Q9ULB1 1477 aa44.41■■■■■ 4.7
SSSCA1-207ENST00000533115 ILDR2Q71H61 639 aa44.41■■■■■ 4.7
SSSCA1-207ENST00000533115 BRINP3Q76B58 766 aa44.38■■■■■ 4.7
SSSCA1-207ENST00000533115 ASXL1Q8IXJ9 1541 aa44.38■■■■■ 4.69
SSSCA1-207ENST00000533115 LRPPRCP42704 1394 aaKnown RBP44.37■■■■■ 4.69
SSSCA1-207ENST00000533115 TMEM132EQ6IEE7 984 aa44.37■■■■■ 4.69
SSSCA1-207ENST00000533115 C14orf93Q9H972 538 aaKnown RBP44.36■■■■■ 4.69
SSSCA1-207ENST00000533115 STK26Q9P289 416 aa44.35■■■■■ 4.69
SSSCA1-207ENST00000533115 TECPR2O15040 1411 aa44.34■■■■■ 4.69
SSSCA1-207ENST00000533115 AHDC1Q5TGY3 1603 aaPredicted RBP44.33■■■■■ 4.69
SSSCA1-207ENST00000533115 ABCC11Q96J66 1382 aa44.32■■■■■ 4.69
SSSCA1-207ENST00000533115 COL16A1Q07092 1604 aaPredicted RBP44.32■■■■■ 4.69
SSSCA1-207ENST00000533115 CFAP70Q5T0N1 1121 aa44.3■■■■■ 4.68
SSSCA1-207ENST00000533115 LAMC1P11047 1609 aa44.29■■■■■ 4.68
SSSCA1-207ENST00000533115 YTHDC2Q9H6S0 1430 aaKnown RBP44.28■■■■■ 4.68
SSSCA1-207ENST00000533115 PHF23Q9BUL5 403 aaPredicted RBP44.28■■■■■ 4.68
SSSCA1-207ENST00000533115 KNDC1Q76NI1 1749 aa44.27■■■■■ 4.68
SSSCA1-207ENST00000533115 JCADQ9P266 1359 aa44.27■■■■■ 4.68
SSSCA1-207ENST00000533115 DCAF11Q8TEB1 546 aa44.25■■■■■ 4.67
SSSCA1-207ENST00000533115 WAPLQ7Z5K2 1190 aa44.24■■■■■ 4.67
SSSCA1-207ENST00000533115 C1orf167Q5SNV9 1468 aa44.23■■■■■ 4.67
SSSCA1-207ENST00000533115 KDM2AQ9Y2K7 1162 aa44.22■■■■■ 4.67
SSSCA1-207ENST00000533115 DHX57Q6P158 1386 aaKnown RBP44.21■■■■■ 4.67
SSSCA1-207ENST00000533115 STAC3Q96MF2 364 aa44.21■■■■■ 4.67
SSSCA1-207ENST00000533115 SIRT1Q96EB6 747 aa44.17■■■■■ 4.66
SSSCA1-207ENST00000533115 CDC42BPGQ6DT37 1551 aa44.17■■■■■ 4.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms