RNA–Protein interactions for RNA: ENST00000532699.1

SDHD-213, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 3

Gene SDHD, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-213ENST00000532699 SCAF1Q9H7N4 1312 aaKnown RBP19.31■□□□□ 0.68
SDHD-213ENST00000532699 STAG3Q9UJ98 1225 aa19.31■□□□□ 0.68
SDHD-213ENST00000532699 ITGAEP38570 1179 aa19.3■□□□□ 0.68
SDHD-213ENST00000532699 SLC26A8Q96RN1 970 aa19.3■□□□□ 0.68
SDHD-213ENST00000532699 RRBP1Q9P2E9 1410 aaKnown RBP19.3■□□□□ 0.68
SDHD-213ENST00000532699 RIMS2Q9UQ26 1411 aa19.28■□□□□ 0.68
SDHD-213ENST00000532699 SENP3Q9H4L4 574 aaPredicted RBP19.27■□□□□ 0.68
SDHD-213ENST00000532699 NUP155O75694 1391 aa19.26■□□□□ 0.67
SDHD-213ENST00000532699 NRXN3Q9Y4C0 1643 aa19.25■□□□□ 0.67
SDHD-213ENST00000532699 TMEM94Q12767 1356 aa19.25■□□□□ 0.67
SDHD-213ENST00000532699 PLEKHG1Q9ULL1 1385 aa19.25■□□□□ 0.67
SDHD-213ENST00000532699 KCNA6P17658 529 aa19.25■□□□□ 0.67
SDHD-213ENST00000532699 RBM33Q96EV2 1170 aaKnown RBP19.25■□□□□ 0.67
SDHD-213ENST00000532699 ADAMTS13Q76LX8 1427 aa19.24■□□□□ 0.67
SDHD-213ENST00000532699 ROBO1Q9Y6N7 1651 aa19.24■□□□□ 0.67
SDHD-213ENST00000532699 NKTRP30414 1462 aaKnown RBP19.23■□□□□ 0.67
SDHD-213ENST00000532699 CLTCL1P53675 1640 aa19.22■□□□□ 0.67
SDHD-213ENST00000532699 NAIPQ13075 1403 aa19.22■□□□□ 0.67
SDHD-213ENST00000532699 SOCS7O14512 581 aa19.2■□□□□ 0.66
SDHD-213ENST00000532699 NUTM2DQ5VT03 806 aaPredicted RBP19.2■□□□□ 0.66
SDHD-213ENST00000532699 DIP2AQ14689 1571 aa19.18■□□□□ 0.66
SDHD-213ENST00000532699 KIF1BO60333 1816 aa19.17■□□□□ 0.66
SDHD-213ENST00000532699 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.17■□□□□ 0.66
SDHD-213ENST00000532699 FAM135BQ49AJ0 1406 aa19.17■□□□□ 0.66
SDHD-213ENST00000532699 CHGAP10645 457 aaKnown RBP19.16■□□□□ 0.66
SDHD-213ENST00000532699 PROSER2Q86WR7 435 aaPredicted RBP19.16■□□□□ 0.66
SDHD-213ENST00000532699 PTPRUQ92729 1446 aa19.16■□□□□ 0.66
SDHD-213ENST00000532699 XRN1Q8IZH2 1706 aaKnown RBP19.15■□□□□ 0.66
SDHD-213ENST00000532699 TRPM2O94759 1503 aa19.15■□□□□ 0.66
SDHD-213ENST00000532699 TBX22Q9Y458 520 aa19.14■□□□□ 0.65
SDHD-213ENST00000532699 NEXMIFQ5QGS0 1516 aa19.14■□□□□ 0.65
SDHD-213ENST00000532699 SETBP1Q9Y6X0 1596 aa19.14■□□□□ 0.65
SDHD-213ENST00000532699 SETD1AO15047 1707 aaKnown RBP19.14■□□□□ 0.65
SDHD-213ENST00000532699 PHLPP1O60346 1717 aa19.11■□□□□ 0.65
SDHD-213ENST00000532699 BCANQ96GW7 911 aa19.11■□□□□ 0.65
SDHD-213ENST00000532699 HFM1A2PYH4 1435 aa19.1■□□□□ 0.65
SDHD-213ENST00000532699 PPP1R15AO75807 674 aaPredicted RBP19.1■□□□□ 0.65
SDHD-213ENST00000532699 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.1■□□□□ 0.65
SDHD-213ENST00000532699 COL16A1Q07092 1604 aaPredicted RBP19.07■□□□□ 0.64
SDHD-213ENST00000532699 PIK3R4Q99570 1358 aa19.07■□□□□ 0.64
SDHD-213ENST00000532699 PPLO60437 1756 aa19.07■□□□□ 0.64
SDHD-213ENST00000532699 HDGFP51858 240 aaKnown RBP19.07■□□□□ 0.64
SDHD-213ENST00000532699 RGS17Q9UGC6 210 aaPredicted RBP19.07■□□□□ 0.64
SDHD-213ENST00000532699 MSH6P52701 1360 aa19.06■□□□□ 0.64
SDHD-213ENST00000532699 NCOA3Q9Y6Q9 1424 aa19.05■□□□□ 0.64
SDHD-213ENST00000532699 NALCNQ8IZF0 1738 aa19.04■□□□□ 0.64
SDHD-213ENST00000532699 METP08581 1390 aa19.04■□□□□ 0.64
SDHD-213ENST00000532699 SLAIN2Q9P270 581 aa19.03■□□□□ 0.64
SDHD-213ENST00000532699 AMOTL2Q9Y2J4 779 aa19.02■□□□□ 0.64
SDHD-213ENST00000532699 IFT172Q9UG01 1749 aa19■□□□□ 0.63
SDHD-213ENST00000532699 AHDC1Q5TGY3 1603 aaPredicted RBP19■□□□□ 0.63
SDHD-213ENST00000532699 ZNF326Q5BKZ1 582 aaKnown RBP18.97■□□□□ 0.63
SDHD-213ENST00000532699 SHPRHQ149N8 1683 aa18.97■□□□□ 0.63
SDHD-213ENST00000532699 NHSL1Q5SYE7 1610 aa18.96■□□□□ 0.63
SDHD-213ENST00000532699 TRIM52Q96A61 297 aa18.96■□□□□ 0.63
SDHD-213ENST00000532699 FOXD1Q16676 465 aa18.95■□□□□ 0.62
SDHD-213ENST00000532699 PHF23Q9BUL5 403 aaPredicted RBP18.95■□□□□ 0.62
SDHD-213ENST00000532699 C19orf44Q9H6X5 657 aa18.95■□□□□ 0.62
SDHD-213ENST00000532699 LRP6O75581 1613 aa18.94■□□□□ 0.62
SDHD-213ENST00000532699 MST1RQ04912 1400 aa18.93■□□□□ 0.62
SDHD-213ENST00000532699 SLC4A1APQ9BWU0 796 aaKnown RBP18.93■□□□□ 0.62
SDHD-213ENST00000532699 DCCP43146 1447 aa18.92■□□□□ 0.62
SDHD-213ENST00000532699 ASXL1Q8IXJ9 1541 aa18.91■□□□□ 0.62
SDHD-213ENST00000532699 POTEAQ6S8J7 498 aa18.91■□□□□ 0.62
SDHD-213ENST00000532699 BRINP3Q76B58 766 aa18.9■□□□□ 0.62
SDHD-213ENST00000532699 C14orf37Q86TY3 774 aa18.9■□□□□ 0.62
SDHD-213ENST00000532699 CADPS2Q86UW7 1296 aa18.9■□□□□ 0.62
SDHD-213ENST00000532699 JCADQ9P266 1359 aa18.9■□□□□ 0.62
SDHD-213ENST00000532699 ADGRL3Q9HAR2 1447 aa18.9■□□□□ 0.62
SDHD-213ENST00000532699 SPATA31E1Q6ZUB1 1445 aa18.89■□□□□ 0.61
SDHD-213ENST00000532699 PRAG1Q86YV5 1406 aa18.89■□□□□ 0.61
SDHD-213ENST00000532699 ATF3P18847 181 aa18.88■□□□□ 0.61
SDHD-213ENST00000532699 ROBO2Q9HCK4 1378 aa18.88■□□□□ 0.61
SDHD-213ENST00000532699 LAMC1P11047 1609 aa18.88■□□□□ 0.61
SDHD-213ENST00000532699 PTCH1Q13635 1447 aa18.87■□□□□ 0.61
SDHD-213ENST00000532699 MPHOSPH9Q99550 1183 aa18.85■□□□□ 0.61
SDHD-213ENST00000532699 RPGRIP1LQ68CZ1 1315 aa18.84■□□□□ 0.61
SDHD-213ENST00000532699 ADGRF5Q8IZF2 1346 aa18.84■□□□□ 0.61
SDHD-213ENST00000532699 KNDC1Q76NI1 1749 aa18.83■□□□□ 0.61
SDHD-213ENST00000532699 VGFO15240 615 aaPredicted RBP18.83■□□□□ 0.6
SDHD-213ENST00000532699 DDX17Q92841 729 aaKnown RBP18.83■□□□□ 0.6
SDHD-213ENST00000532699 C1orf167Q5SNV9 1468 aa18.81■□□□□ 0.6
SDHD-213ENST00000532699 CCDC144AA2RUR9 1427 aa18.81■□□□□ 0.6
SDHD-213ENST00000532699 SETD5Q9C0A6 1442 aa18.81■□□□□ 0.6
SDHD-213ENST00000532699 RGPD8O14715 1765 aaPredicted RBP18.79■□□□□ 0.6
SDHD-213ENST00000532699 SPATA31A6Q5VVP1 1343 aa18.78■□□□□ 0.6
SDHD-213ENST00000532699 PIK3C2GO75747 1445 aa18.77■□□□□ 0.6
SDHD-213ENST00000532699 RGL3Q3MIN7 710 aa18.76■□□□□ 0.59
SDHD-213ENST00000532699 CDC42BPGQ6DT37 1551 aa18.76■□□□□ 0.59
SDHD-213ENST00000532699 TECPR2O15040 1411 aa18.74■□□□□ 0.59
SDHD-213ENST00000532699 NRXN1Q9ULB1 1477 aa18.74■□□□□ 0.59
SDHD-213ENST00000532699 RAB3GAP2Q9H2M9 1393 aa18.74■□□□□ 0.59
SDHD-213ENST00000532699 ORAI2Q96SN7 254 aa18.74■□□□□ 0.59
SDHD-213ENST00000532699 FMN2Q9NZ56 1722 aa18.74■□□□□ 0.59
SDHD-213ENST00000532699 PNPLA6Q8IY17 1366 aa18.73■□□□□ 0.59
SDHD-213ENST00000532699 PLEKHH1Q9ULM0 1364 aa18.73■□□□□ 0.59
SDHD-213ENST00000532699 COL22A1Q8NFW1 1626 aaPredicted RBP18.71■□□□□ 0.59
SDHD-213ENST00000532699 ANKRD30BQ9BXX2 1392 aa18.71■□□□□ 0.59
SDHD-213ENST00000532699 TMEM132EQ6IEE7 984 aa18.71■□□□□ 0.59
SDHD-213ENST00000532699 LRPPRCP42704 1394 aaKnown RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms