RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 GPATCH8Q9UKJ3 1502 aaKnown RBP20.12■□□□□ 0.81
PPFIA1-222ENST00000532504 PTPN23Q9H3S7 1636 aa20.12■□□□□ 0.81
PPFIA1-222ENST00000532504 SLC12A5Q9H2X9 1139 aa20.12■□□□□ 0.81
PPFIA1-222ENST00000532504 RPGRIP1LQ68CZ1 1315 aa20.12■□□□□ 0.81
PPFIA1-222ENST00000532504 STRN4Q9NRL3 753 aa20.11■□□□□ 0.81
PPFIA1-222ENST00000532504 IPO8O15397 1037 aaKnown RBP20.11■□□□□ 0.81
PPFIA1-222ENST00000532504 SLC4A10Q6U841 1118 aa20.11■□□□□ 0.81
PPFIA1-222ENST00000532504 WAPLQ7Z5K2 1190 aa20.1■□□□□ 0.81
PPFIA1-222ENST00000532504 HMOX1P09601 288 aa20.1■□□□□ 0.81
PPFIA1-222ENST00000532504 CHMP3Q9Y3E7 222 aa20.1■□□□□ 0.81
PPFIA1-222ENST00000532504 RAPGEF4Q8WZA2 1011 aa20.1■□□□□ 0.81
PPFIA1-222ENST00000532504 PRKRIP1Q9H875 184 aaPredicted RBP20.1■□□□□ 0.81
PPFIA1-222ENST00000532504 SMC4Q9NTJ3 1288 aa20.1■□□□□ 0.81
PPFIA1-222ENST00000532504 DHX29Q7Z478 1369 aaKnown RBP20.1■□□□□ 0.81
PPFIA1-222ENST00000532504 GTF2E1P29083 439 aaPredicted RBP20.09■□□□□ 0.81
PPFIA1-222ENST00000532504 NCOA1Q15788 1441 aa20.09■□□□□ 0.81
PPFIA1-222ENST00000532504 KIAA0556O60303 1618 aa20.09■□□□□ 0.81
PPFIA1-222ENST00000532504 UGGT2Q9NYU1 1516 aa20.09■□□□□ 0.81
PPFIA1-222ENST00000532504 ITPRIPQ8IWB1 547 aa20.08■□□□□ 0.81
PPFIA1-222ENST00000532504 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.08■□□□□ 0.811e-6■■□□□ 13.1
PPFIA1-222ENST00000532504 NGEFQ8N5V2 710 aa20.08■□□□□ 0.8
PPFIA1-222ENST00000532504 CLUAP1Q96AJ1 413 aa20.07■□□□□ 0.8
PPFIA1-222ENST00000532504 ANKRD30BQ9BXX2 1392 aa20.07■□□□□ 0.8
PPFIA1-222ENST00000532504 TTC5Q8N0Z6 440 aa20.06■□□□□ 0.8
PPFIA1-222ENST00000532504 CHMP4AQ9BY43 222 aa20.05■□□□□ 0.8
PPFIA1-222ENST00000532504 RCAN3Q9UKA8 241 aa20.05■□□□□ 0.8
PPFIA1-222ENST00000532504 RTEL1-TNFRSF6BF6WH68 1400 aa20.05■□□□□ 0.8
PPFIA1-222ENST00000532504 CASC1Q6TDU7 716 aa20.05■□□□□ 0.8
PPFIA1-222ENST00000532504 ABCC2Q92887 1545 aa20.04■□□□□ 0.8
PPFIA1-222ENST00000532504 APAF1O14727 1248 aa20.04■□□□□ 0.8
PPFIA1-222ENST00000532504 TAOK2Q9UL54 1235 aa20.04■□□□□ 0.8
PPFIA1-222ENST00000532504 CCDC7Q96M83 1385 aa20.04■□□□□ 0.8
PPFIA1-222ENST00000532504 EIF2S2P20042 333 aaKnown RBP20.03■□□□□ 0.8
PPFIA1-222ENST00000532504 AMOTL2Q9Y2J4 779 aa20.03■□□□□ 0.8
PPFIA1-222ENST00000532504 B4GALNT3Q6L9W6 998 aa20.03■□□□□ 0.8
PPFIA1-222ENST00000532504 NECTIN2Q92692 538 aa20.03■□□□□ 0.8
PPFIA1-222ENST00000532504 PPP6R1Q9UPN7 881 aa20.02■□□□□ 0.8
PPFIA1-222ENST00000532504 TRAPPC8Q9Y2L5 1435 aa20.02■□□□□ 0.8
PPFIA1-222ENST00000532504 TMX4Q9H1E5 349 aaPredicted RBP20.02■□□□□ 0.79
PPFIA1-222ENST00000532504 HSPA2P54652 639 aa20.01■□□□□ 0.79
PPFIA1-222ENST00000532504 TAF7LQ5H9L4 462 aa20.01■□□□□ 0.79
PPFIA1-222ENST00000532504 BCL2L13Q9BXK5 485 aa20.01■□□□□ 0.79
PPFIA1-222ENST00000532504 MTHFSP49914 203 aa20■□□□□ 0.79
PPFIA1-222ENST00000532504 ADGRF5Q8IZF2 1346 aa20■□□□□ 0.79
PPFIA1-222ENST00000532504 MAP3K1Q13233 1512 aa20■□□□□ 0.79
PPFIA1-222ENST00000532504 RIPK4P57078 832 aa20■□□□□ 0.79
PPFIA1-222ENST00000532504 CEP170Q5SW79 1584 aa19.99■□□□□ 0.79
PPFIA1-222ENST00000532504 PBRM1Q86U86 1689 aa19.99■□□□□ 0.79
PPFIA1-222ENST00000532504 TNRQ92752 1358 aa19.99■□□□□ 0.79
PPFIA1-222ENST00000532504 DISP1Q96F81 1524 aa19.98■□□□□ 0.79
PPFIA1-222ENST00000532504 SYCP2Q9BX26 1530 aa19.98■□□□□ 0.79
PPFIA1-222ENST00000532504 KCNJ4P48050 445 aa19.98■□□□□ 0.79
PPFIA1-222ENST00000532504 PRDM11Q9NQV5 511 aa19.98■□□□□ 0.79
PPFIA1-222ENST00000532504 TCERG1O14776 1098 aaKnown RBP19.97■□□□□ 0.79
PPFIA1-222ENST00000532504 NUDT16Q96DE0 195 aaKnown RBP19.97■□□□□ 0.79
PPFIA1-222ENST00000532504 CTTNBP2Q8WZ74 1663 aa19.97■□□□□ 0.79
PPFIA1-222ENST00000532504 ZNF518AQ6AHZ1 1483 aa19.97■□□□□ 0.79
PPFIA1-222ENST00000532504 PPP4R2Q9NY27 417 aa19.97■□□□□ 0.79
PPFIA1-222ENST00000532504 WASHC2AQ641Q2 1341 aa19.96■□□□□ 0.79
PPFIA1-222ENST00000532504 ZC3H6P61129 1189 aaKnown RBP19.96■□□□□ 0.79
PPFIA1-222ENST00000532504 ZNF692Q9BU19 519 aaPredicted RBP19.96■□□□□ 0.79
PPFIA1-222ENST00000532504 A2MP01023 1474 aa19.95■□□□□ 0.78
PPFIA1-222ENST00000532504 KDM5BQ9UGL1 1544 aa19.95■□□□□ 0.78
PPFIA1-222ENST00000532504 DMRT2Q9Y5R5 561 aa19.95■□□□□ 0.78
PPFIA1-222ENST00000532504 TOM1L2Q6ZVM7 507 aa19.95■□□□□ 0.78
PPFIA1-222ENST00000532504 ABCA5Q8WWZ7 1642 aa19.94■□□□□ 0.78
PPFIA1-222ENST00000532504 FOXO3O43524 673 aa19.94■□□□□ 0.78
PPFIA1-222ENST00000532504 CCDC61Q9Y6R9 512 aa19.93■□□□□ 0.78
PPFIA1-222ENST00000532504 GORABQ5T7V8 394 aa19.92■□□□□ 0.78
PPFIA1-222ENST00000532504 FGD1P98174 961 aa19.91■□□□□ 0.78
PPFIA1-222ENST00000532504 G3V3G9 751 aa19.9■□□□□ 0.78
PPFIA1-222ENST00000532504 DCAF8Q5TAQ9 597 aa19.9■□□□□ 0.78
PPFIA1-222ENST00000532504 NAP1L2Q9ULW6 460 aaPredicted RBP19.9■□□□□ 0.78
PPFIA1-222ENST00000532504 KLHL34Q8N239 644 aa19.9■□□□□ 0.78
PPFIA1-222ENST00000532504 TARBP1Q13395 1621 aaKnown RBP19.89■□□□□ 0.78
PPFIA1-222ENST00000532504 RRS1Q15050 365 aaKnown RBP19.89■□□□□ 0.78
PPFIA1-222ENST00000532504 DDX54Q8TDD1 881 aaKnown RBP19.89■□□□□ 0.78
PPFIA1-222ENST00000532504 NOS1P29475 1434 aa19.89■□□□□ 0.77
PPFIA1-222ENST00000532504 ADAMTS2O95450 1211 aa19.89■□□□□ 0.77
PPFIA1-222ENST00000532504 TSPYL4Q9UJ04 414 aa19.88■□□□□ 0.77
PPFIA1-222ENST00000532504 RUNDC1Q96C34 613 aa19.87■□□□□ 0.77
PPFIA1-222ENST00000532504 ABCC10Q5T3U5 1492 aa19.86■□□□□ 0.77
PPFIA1-222ENST00000532504 PDE3BQ13370 1112 aa19.86■□□□□ 0.77
PPFIA1-222ENST00000532504 ISY1Q9ULR0 285 aaKnown RBP19.86■□□□□ 0.77
PPFIA1-222ENST00000532504 PHF8Q9UPP1 1060 aa19.85■□□□□ 0.77
PPFIA1-222ENST00000532504 ATAD2Q6PL18 1390 aa19.85■□□□□ 0.77
PPFIA1-222ENST00000532504 PRKAR2BP31323 418 aa19.84■□□□□ 0.77
PPFIA1-222ENST00000532504 E9PSI1 815 aa19.84■□□□□ 0.77
PPFIA1-222ENST00000532504 TATP17735 454 aaPredicted RBP19.84■□□□□ 0.77
PPFIA1-222ENST00000532504 PTPRKQ15262 1439 aa19.84■□□□□ 0.77
PPFIA1-222ENST00000532504 SULT6B1Q6IMI4 303 aa19.84■□□□□ 0.77
PPFIA1-222ENST00000532504 HDAC5Q9UQL6 1122 aa19.84■□□□□ 0.77
PPFIA1-222ENST00000532504 PPP2R1AP30153 589 aa19.84■□□□□ 0.77
PPFIA1-222ENST00000532504 FRAT2O75474 233 aaPredicted RBP19.83■□□□□ 0.77
PPFIA1-222ENST00000532504 TPRNQ4KMQ1 711 aa19.83■□□□□ 0.77
PPFIA1-222ENST00000532504 RBM42Q9BTD8 480 aaKnown RBP19.83■□□□□ 0.76
PPFIA1-222ENST00000532504 PLEKHO1Q53GL0 409 aaPredicted RBP19.82■□□□□ 0.76
PPFIA1-222ENST00000532504 NCKAP5LQ9HCH0 1330 aa19.82■□□□□ 0.76
PPFIA1-222ENST00000532504 RWDD1Q9H446 243 aaPredicted RBP19.82■□□□□ 0.76
PPFIA1-222ENST00000532504 ADAMTS8Q9UP79 889 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms