RNA–Protein interactions for RNA: ENST00000532138.1

SCN4B-206, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 4

Gene SCN4B, Length 850 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-206ENST00000532138 NEURL4Q96JN8 1562 aa29.33■■■□□ 2.29
SCN4B-206ENST00000532138 TMEM2Q9UHN6 1383 aa29.3■■■□□ 2.28
SCN4B-206ENST00000532138 POLR1AO95602 1720 aaPredicted RBP29.3■■■□□ 2.28
SCN4B-206ENST00000532138 MED1Q15648 1581 aaPredicted RBP29.3■■■□□ 2.28
SCN4B-206ENST00000532138 NCKAP5LQ9HCH0 1330 aa29.28■■■□□ 2.28
SCN4B-206ENST00000532138 SPATA31E1Q6ZUB1 1445 aa29.28■■■□□ 2.28
SCN4B-206ENST00000532138 ZFYVE9O95405 1425 aa29.25■■■□□ 2.27
SCN4B-206ENST00000532138 RIMS2Q9UQ26 1411 aa29.24■■■□□ 2.27
SCN4B-206ENST00000532138 SCAF11Q99590 1463 aaKnown RBP29.23■■■□□ 2.27
SCN4B-206ENST00000532138 HSPA1LP34931 641 aa29.23■■■□□ 2.27
SCN4B-206ENST00000532138 ANKLE2Q86XL3 938 aa29.23■■■□□ 2.27
SCN4B-206ENST00000532138 ZNF326Q5BKZ1 582 aaKnown RBP29.22■■■□□ 2.27
SCN4B-206ENST00000532138 NEXMIFQ5QGS0 1516 aa29.21■■■□□ 2.27
SCN4B-206ENST00000532138 EID1Q9Y6B2 187 aa29.21■■■□□ 2.27
SCN4B-206ENST00000532138 HDGFP51858 240 aaKnown RBP29.2■■■□□ 2.26
SCN4B-206ENST00000532138 PPLO60437 1756 aa29.2■■■□□ 2.26
SCN4B-206ENST00000532138 RPGRIP1LQ68CZ1 1315 aa29.2■■■□□ 2.26
SCN4B-206ENST00000532138 TXNDC2Q86VQ3 553 aa29.19■■■□□ 2.26
SCN4B-206ENST00000532138 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.19■■■□□ 2.26
SCN4B-206ENST00000532138 IFT172Q9UG01 1749 aa29.19■■■□□ 2.26
SCN4B-206ENST00000532138 MED14O60244 1454 aa29.18■■■□□ 2.26
SCN4B-206ENST00000532138 LTKP29376 864 aa29.17■■■□□ 2.26
SCN4B-206ENST00000532138 CLSPNQ9HAW4 1339 aa29.16■■■□□ 2.26
SCN4B-206ENST00000532138 RGL3Q3MIN7 710 aa29.15■■■□□ 2.26
SCN4B-206ENST00000532138 SCAF1Q9H7N4 1312 aaKnown RBP29.15■■■□□ 2.26
SCN4B-206ENST00000532138 SIN3AQ96ST3 1273 aa29.14■■■□□ 2.26
SCN4B-206ENST00000532138 IQGAP1P46940 1657 aa29.14■■■□□ 2.26
SCN4B-206ENST00000532138 NPHP4O75161 1426 aaPredicted RBP29.13■■■□□ 2.25
SCN4B-206ENST00000532138 PIP4K2BP78356 416 aa29.12■■■□□ 2.25
SCN4B-206ENST00000532138 PPP1R15AO75807 674 aaPredicted RBP29.11■■■□□ 2.25
SCN4B-206ENST00000532138 PHF23Q9BUL5 403 aaPredicted RBP29.11■■■□□ 2.25
SCN4B-206ENST00000532138 PLEKHG1Q9ULL1 1385 aa29.1■■■□□ 2.25
SCN4B-206ENST00000532138 CCER1Q8TC90 406 aaPredicted RBP29.09■■■□□ 2.25
SCN4B-206ENST00000532138 NUTM2DQ5VT03 806 aaPredicted RBP29.08■■■□□ 2.25
SCN4B-206ENST00000532138 VGFO15240 615 aaPredicted RBP29.07■■■□□ 2.24
SCN4B-206ENST00000532138 NEUROD1Q13562 356 aa29.07■■■□□ 2.24
SCN4B-206ENST00000532138 MYOM2P54296 1465 aa29.05■■■□□ 2.24
SCN4B-206ENST00000532138 TOM1O60784 492 aa29.05■■■□□ 2.24
SCN4B-206ENST00000532138 SETBP1Q9Y6X0 1596 aa29.04■■■□□ 2.24
SCN4B-206ENST00000532138 STAC3Q96MF2 364 aa29.02■■■□□ 2.24
SCN4B-206ENST00000532138 NRXN3Q9Y4C0 1643 aa29.02■■■□□ 2.24
SCN4B-206ENST00000532138 DIP2AQ14689 1571 aa29.01■■■□□ 2.23
SCN4B-206ENST00000532138 NRXN1Q9ULB1 1477 aa28.99■■■□□ 2.23
SCN4B-206ENST00000532138 ADGRF5Q8IZF2 1346 aa28.98■■■□□ 2.23
SCN4B-206ENST00000532138 DCAF11Q8TEB1 546 aa28.98■■■□□ 2.23
SCN4B-206ENST00000532138 BCANQ96GW7 911 aa28.98■■■□□ 2.23
SCN4B-206ENST00000532138 ADAMTS13Q76LX8 1427 aa28.97■■■□□ 2.23
SCN4B-206ENST00000532138 TONSLQ96HA7 1378 aa28.96■■■□□ 2.23
SCN4B-206ENST00000532138 PIK3C2GO75747 1445 aa28.95■■■□□ 2.23
SCN4B-206ENST00000532138 L3MBTL2Q969R5 705 aa28.95■■■□□ 2.22
SCN4B-206ENST00000532138 KDM2AQ9Y2K7 1162 aa28.93■■■□□ 2.22
SCN4B-206ENST00000532138 TBX22Q9Y458 520 aa28.93■■■□□ 2.22
SCN4B-206ENST00000532138 SETD1AO15047 1707 aaKnown RBP28.93■■■□□ 2.22
SCN4B-206ENST00000532138 SLC26A8Q96RN1 970 aa28.92■■■□□ 2.22
SCN4B-206ENST00000532138 SENP3Q9H4L4 574 aaPredicted RBP28.92■■■□□ 2.22
SCN4B-206ENST00000532138 CPS1P31327 1500 aa28.92■■■□□ 2.22
SCN4B-206ENST00000532138 ALKQ9UM73 1620 aa28.91■■■□□ 2.22
SCN4B-206ENST00000532138 LAMC1P11047 1609 aa28.91■■■□□ 2.22
SCN4B-206ENST00000532138 CHD2O14647 1828 aaKnown RBP28.87■■■□□ 2.21
SCN4B-206ENST00000532138 PIK3R4Q99570 1358 aa28.87■■■□□ 2.21
SCN4B-206ENST00000532138 TIMELESSQ9UNS1 1208 aa28.86■■■□□ 2.21
SCN4B-206ENST00000532138 PRAG1Q86YV5 1406 aa28.86■■■□□ 2.21
SCN4B-206ENST00000532138 KIAA1210Q9ULL0 1709 aa28.84■■■□□ 2.21
SCN4B-206ENST00000532138 NWD1Q149M9 1564 aa28.84■■■□□ 2.21
SCN4B-206ENST00000532138 C14orf93Q9H972 538 aaKnown RBP28.83■■■□□ 2.21
SCN4B-206ENST00000532138 STRCP1A6NGW2 1772 aa28.82■■■□□ 2.2
SCN4B-206ENST00000532138 METP08581 1390 aa28.81■■■□□ 2.2
SCN4B-206ENST00000532138 CFAP70Q5T0N1 1121 aa28.79■■■□□ 2.2
SCN4B-206ENST00000532138 RGS17Q9UGC6 210 aaPredicted RBP28.79■■■□□ 2.2
SCN4B-206ENST00000532138 ASXL1Q8IXJ9 1541 aa28.79■■■□□ 2.2
SCN4B-206ENST00000532138 KCNA6P17658 529 aa28.78■■■□□ 2.2
SCN4B-206ENST00000532138 XRN1Q8IZH2 1706 aaKnown RBP28.77■■■□□ 2.2
SCN4B-206ENST00000532138 PTPRUQ92729 1446 aa28.76■■■□□ 2.19
SCN4B-206ENST00000532138 TRPM1Q7Z4N2 1603 aa28.75■■■□□ 2.19
SCN4B-206ENST00000532138 NKTRP30414 1462 aaKnown RBP28.74■■■□□ 2.19
SCN4B-206ENST00000532138 ADGRB1O14514 1584 aa28.74■■■□□ 2.19
SCN4B-206ENST00000532138 KNDC1Q76NI1 1749 aa28.72■■■□□ 2.19
SCN4B-206ENST00000532138 AMOTL2Q9Y2J4 779 aa28.71■■■□□ 2.19
SCN4B-206ENST00000532138 NBPF8Q3BBV2 869 aa28.7■■■□□ 2.18
SCN4B-206ENST00000532138 TMEM132EQ6IEE7 984 aa28.69■■■□□ 2.18
SCN4B-206ENST00000532138 LRPPRCP42704 1394 aaKnown RBP28.69■■■□□ 2.18
SCN4B-206ENST00000532138 YTHDC2Q9H6S0 1430 aaKnown RBP28.69■■■□□ 2.18
SCN4B-206ENST00000532138 TECPR2O15040 1411 aa28.67■■■□□ 2.18
SCN4B-206ENST00000532138 PTCH1Q13635 1447 aa28.66■■■□□ 2.18
SCN4B-206ENST00000532138 RALGAPBQ86X10 1494 aa28.66■■■□□ 2.18
SCN4B-206ENST00000532138 ABCC11Q96J66 1382 aa28.65■■■□□ 2.18
SCN4B-206ENST00000532138 LRRC7Q96NW7 1537 aa28.64■■■□□ 2.18
SCN4B-206ENST00000532138 NBPF1Q3BBV0 1214 aa28.63■■■□□ 2.17
SCN4B-206ENST00000532138 XIRP1Q702N8 1843 aaKnown RBP28.62■■■□□ 2.17
SCN4B-206ENST00000532138 DLC1Q96QB1 1528 aa28.62■■■□□ 2.17
SCN4B-206ENST00000532138 STK26Q9P289 416 aa28.61■■■□□ 2.17
SCN4B-206ENST00000532138 ROCK2O75116 1388 aaKnown RBP28.61■■■□□ 2.17
SCN4B-206ENST00000532138 PROSER2Q86WR7 435 aaPredicted RBP28.6■■■□□ 2.17
SCN4B-206ENST00000532138 GPRASP1Q5JY77 1395 aa28.6■■■□□ 2.17
SCN4B-206ENST00000532138 ROBO2Q9HCK4 1378 aa28.58■■■□□ 2.17
SCN4B-206ENST00000532138 NCOA3Q9Y6Q9 1424 aa28.58■■■□□ 2.17
SCN4B-206ENST00000532138 ARHGEF28Q8N1W1 1705 aaKnown RBP28.57■■■□□ 2.16
SCN4B-206ENST00000532138 SIRT1Q96EB6 747 aa28.57■■■□□ 2.16
SCN4B-206ENST00000532138 TMEM94Q12767 1356 aa28.57■■■□□ 2.16
SCN4B-206ENST00000532138 FAM135BQ49AJ0 1406 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms