RNA–Protein interactions for RNA: ENST00000531523.1

SNHG9-201, Transcript of small nucleolar RNA host gene 9, humanhuman

TSL 1 (best) BASIC

Gene SNHG9, Length 275 nt, Biotype lincRNA, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG9-201ENST00000531523 SCAF1Q9H7N4 1312 aaKnown RBP22.91■■□□□ 1.26
SNHG9-201ENST00000531523 CHD2O14647 1828 aaKnown RBP22.91■■□□□ 1.26
SNHG9-201ENST00000531523 SPHKAPQ2M3C7 1700 aa22.91■■□□□ 1.26
SNHG9-201ENST00000531523 RIMS2Q9UQ26 1411 aa22.91■■□□□ 1.26
SNHG9-201ENST00000531523 ITGAEP38570 1179 aa22.89■■□□□ 1.25
SNHG9-201ENST00000531523 NKTRP30414 1462 aaKnown RBP22.89■■□□□ 1.25
SNHG9-201ENST00000531523 PLEKHG1Q9ULL1 1385 aa22.89■■□□□ 1.25
SNHG9-201ENST00000531523 NUP155O75694 1391 aa22.88■■□□□ 1.25
SNHG9-201ENST00000531523 SLC26A8Q96RN1 970 aa22.87■■□□□ 1.25
SNHG9-201ENST00000531523 TMEM94Q12767 1356 aa22.85■■□□□ 1.25
SNHG9-201ENST00000531523 KCNA6P17658 529 aa22.84■■□□□ 1.25
SNHG9-201ENST00000531523 NAIPQ13075 1403 aa22.83■■□□□ 1.25
SNHG9-201ENST00000531523 ADAMTS13Q76LX8 1427 aa22.82■■□□□ 1.24
SNHG9-201ENST00000531523 DIP2AQ14689 1571 aa22.82■■□□□ 1.24
SNHG9-201ENST00000531523 NRXN3Q9Y4C0 1643 aa22.81■■□□□ 1.24
SNHG9-201ENST00000531523 CLTCL1P53675 1640 aa22.79■■□□□ 1.24
SNHG9-201ENST00000531523 ROBO1Q9Y6N7 1651 aa22.79■■□□□ 1.24
SNHG9-201ENST00000531523 TRPM2O94759 1503 aa22.77■■□□□ 1.24
SNHG9-201ENST00000531523 RBM33Q96EV2 1170 aaKnown RBP22.76■■□□□ 1.23
SNHG9-201ENST00000531523 SENP3Q9H4L4 574 aaPredicted RBP22.76■■□□□ 1.23
SNHG9-201ENST00000531523 FAM135BQ49AJ0 1406 aa22.75■■□□□ 1.23
SNHG9-201ENST00000531523 HFM1A2PYH4 1435 aa22.74■■□□□ 1.23
SNHG9-201ENST00000531523 SOCS7O14512 581 aa22.74■■□□□ 1.23
SNHG9-201ENST00000531523 CHGAP10645 457 aaKnown RBP22.74■■□□□ 1.23
SNHG9-201ENST00000531523 SETBP1Q9Y6X0 1596 aa22.74■■□□□ 1.23
SNHG9-201ENST00000531523 PPP1R15AO75807 674 aaPredicted RBP22.73■■□□□ 1.23
SNHG9-201ENST00000531523 PROSER2Q86WR7 435 aaPredicted RBP22.73■■□□□ 1.23
SNHG9-201ENST00000531523 TBX22Q9Y458 520 aa22.73■■□□□ 1.23
SNHG9-201ENST00000531523 XRN1Q8IZH2 1706 aaKnown RBP22.72■■□□□ 1.23
SNHG9-201ENST00000531523 NUTM2DQ5VT03 806 aaPredicted RBP22.72■■□□□ 1.23
SNHG9-201ENST00000531523 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.72■■□□□ 1.23
SNHG9-201ENST00000531523 NEXMIFQ5QGS0 1516 aa22.72■■□□□ 1.23
SNHG9-201ENST00000531523 HDGFP51858 240 aaKnown RBP22.7■■□□□ 1.22
SNHG9-201ENST00000531523 BCANQ96GW7 911 aa22.7■■□□□ 1.22
SNHG9-201ENST00000531523 PTPRUQ92729 1446 aa22.7■■□□□ 1.22
SNHG9-201ENST00000531523 KIF1BO60333 1816 aa22.7■■□□□ 1.22
SNHG9-201ENST00000531523 PIK3R4Q99570 1358 aa22.69■■□□□ 1.22
SNHG9-201ENST00000531523 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.68■■□□□ 1.22
SNHG9-201ENST00000531523 MSH6P52701 1360 aa22.67■■□□□ 1.22
SNHG9-201ENST00000531523 NCOA3Q9Y6Q9 1424 aa22.66■■□□□ 1.22
SNHG9-201ENST00000531523 SETD1AO15047 1707 aaKnown RBP22.65■■□□□ 1.22
SNHG9-201ENST00000531523 PHLPP1O60346 1717 aa22.63■■□□□ 1.21
SNHG9-201ENST00000531523 COL16A1Q07092 1604 aaPredicted RBP22.62■■□□□ 1.21
SNHG9-201ENST00000531523 PPLO60437 1756 aa22.59■■□□□ 1.21
SNHG9-201ENST00000531523 METP08581 1390 aa22.58■■□□□ 1.21
SNHG9-201ENST00000531523 SLAIN2Q9P270 581 aa22.57■■□□□ 1.2
SNHG9-201ENST00000531523 NALCNQ8IZF0 1738 aa22.56■■□□□ 1.2
SNHG9-201ENST00000531523 AHDC1Q5TGY3 1603 aaPredicted RBP22.56■■□□□ 1.2
SNHG9-201ENST00000531523 AMOTL2Q9Y2J4 779 aa22.55■■□□□ 1.2
SNHG9-201ENST00000531523 ZNF326Q5BKZ1 582 aaKnown RBP22.54■■□□□ 1.2
SNHG9-201ENST00000531523 RGS17Q9UGC6 210 aaPredicted RBP22.54■■□□□ 1.2
SNHG9-201ENST00000531523 DCCP43146 1447 aa22.53■■□□□ 1.2
SNHG9-201ENST00000531523 TRIM52Q96A61 297 aa22.52■■□□□ 1.2
SNHG9-201ENST00000531523 IFT172Q9UG01 1749 aa22.51■■□□□ 1.19
SNHG9-201ENST00000531523 PHF23Q9BUL5 403 aaPredicted RBP22.51■■□□□ 1.19
SNHG9-201ENST00000531523 C19orf44Q9H6X5 657 aa22.5■■□□□ 1.19
SNHG9-201ENST00000531523 SLC4A1APQ9BWU0 796 aaKnown RBP22.49■■□□□ 1.19
SNHG9-201ENST00000531523 SHPRHQ149N8 1683 aa22.49■■□□□ 1.19
SNHG9-201ENST00000531523 PRAG1Q86YV5 1406 aa22.48■■□□□ 1.19
SNHG9-201ENST00000531523 CADPS2Q86UW7 1296 aa22.48■■□□□ 1.19
SNHG9-201ENST00000531523 NHSL1Q5SYE7 1610 aa22.48■■□□□ 1.19
SNHG9-201ENST00000531523 MST1RQ04912 1400 aa22.47■■□□□ 1.19
SNHG9-201ENST00000531523 ADGRL3Q9HAR2 1447 aa22.47■■□□□ 1.19
SNHG9-201ENST00000531523 C14orf37Q86TY3 774 aa22.46■■□□□ 1.19
SNHG9-201ENST00000531523 ASXL1Q8IXJ9 1541 aa22.46■■□□□ 1.19
SNHG9-201ENST00000531523 FOXD1Q16676 465 aa22.45■■□□□ 1.18
SNHG9-201ENST00000531523 JCADQ9P266 1359 aa22.45■■□□□ 1.18
SNHG9-201ENST00000531523 PTCH1Q13635 1447 aa22.45■■□□□ 1.18
SNHG9-201ENST00000531523 LRP6O75581 1613 aa22.44■■□□□ 1.18
SNHG9-201ENST00000531523 SPATA31E1Q6ZUB1 1445 aa22.43■■□□□ 1.18
SNHG9-201ENST00000531523 ATF3P18847 181 aa22.43■■□□□ 1.18
SNHG9-201ENST00000531523 BRINP3Q76B58 766 aa22.42■■□□□ 1.18
SNHG9-201ENST00000531523 RPGRIP1LQ68CZ1 1315 aa22.41■■□□□ 1.18
SNHG9-201ENST00000531523 ROBO2Q9HCK4 1378 aa22.39■■□□□ 1.18
SNHG9-201ENST00000531523 LAMC1P11047 1609 aa22.39■■□□□ 1.18
SNHG9-201ENST00000531523 VGFO15240 615 aaPredicted RBP22.39■■□□□ 1.17
SNHG9-201ENST00000531523 CCDC144AA2RUR9 1427 aa22.39■■□□□ 1.17
SNHG9-201ENST00000531523 POTEAQ6S8J7 498 aa22.37■■□□□ 1.17
SNHG9-201ENST00000531523 MPHOSPH9Q99550 1183 aa22.37■■□□□ 1.17
SNHG9-201ENST00000531523 KNDC1Q76NI1 1749 aa22.36■■□□□ 1.17
SNHG9-201ENST00000531523 SETD5Q9C0A6 1442 aa22.34■■□□□ 1.17
SNHG9-201ENST00000531523 ADGRF5Q8IZF2 1346 aa22.33■■□□□ 1.17
SNHG9-201ENST00000531523 C1orf167Q5SNV9 1468 aa22.33■■□□□ 1.16
SNHG9-201ENST00000531523 SPATA31A6Q5VVP1 1343 aa22.32■■□□□ 1.16
SNHG9-201ENST00000531523 PIK3C2GO75747 1445 aa22.31■■□□□ 1.16
SNHG9-201ENST00000531523 CDC42BPGQ6DT37 1551 aa22.31■■□□□ 1.16
SNHG9-201ENST00000531523 TECPR2O15040 1411 aa22.31■■□□□ 1.16
SNHG9-201ENST00000531523 ANKRD30BQ9BXX2 1392 aa22.28■■□□□ 1.16
SNHG9-201ENST00000531523 NRXN1Q9ULB1 1477 aa22.28■■□□□ 1.16
SNHG9-201ENST00000531523 RAB3GAP2Q9H2M9 1393 aa22.27■■□□□ 1.16
SNHG9-201ENST00000531523 DDX17Q92841 729 aaKnown RBP22.26■■□□□ 1.15
SNHG9-201ENST00000531523 RGL3Q3MIN7 710 aa22.25■■□□□ 1.15
SNHG9-201ENST00000531523 MYOM2P54296 1465 aa22.24■■□□□ 1.15
SNHG9-201ENST00000531523 PNPLA6Q8IY17 1366 aa22.24■■□□□ 1.15
SNHG9-201ENST00000531523 LRPPRCP42704 1394 aaKnown RBP22.23■■□□□ 1.15
SNHG9-201ENST00000531523 FMN2Q9NZ56 1722 aa22.21■■□□□ 1.15
SNHG9-201ENST00000531523 ACIN1Q9UKV3 1341 aaKnown RBP22.21■■□□□ 1.15
SNHG9-201ENST00000531523 ORAI2Q96SN7 254 aa22.2■■□□□ 1.14
SNHG9-201ENST00000531523 ABCC11Q96J66 1382 aa22.2■■□□□ 1.14
SNHG9-201ENST00000531523 PLEKHH1Q9ULM0 1364 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms